Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p24330 Brassica napus
A05p24340 Brassica napus
Aa31LG6G7910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3533 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3534 Anthoceros agrestis
Actinidia13627 Actinidia chinensis
Actinidia27251 Actinidia chinensis
Actinidia27252 Actinidia chinensis
Actinidia27253 Actinidia chinensis
Ah.10g029720 Amaranthus hybridus
AL1G47780 Arabidopsis lyrata
AL8G14960 Arabidopsis lyrata
AL8G14970 Arabidopsis lyrata
Aqoxy2G00637 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8FW391 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IE8JUR Arachis hypogaea
AT1G33400 Arabidopsis thaliana
ATR1126G052 Amborella trichopoda
Atru.chr12.227 Acer truncatum
AUR62031675 Chenopodium quinoa
AUR62032559 Chenopodium quinoa
BcaB03g13702 Brassica carinata
BcaC05g27807 Brassica carinata
BolC5t32537H Brassica oleracea
BraA05t21327Z Brassica rapa
C05p38090 Brassica napus
CAN.G1151.3 Capsicum annuum
CAN.G1151.4 Capsicum annuum
CANSAT56G3301 Cannabis sativa
CARHR032830 Cardamine hirsuta
CARHR032840 Cardamine hirsuta
Carub.0001s3159 Capsella rubella
Ca_16843_v3 Cicer arietinum L.
Cc02_g04980 Coffea canephora
CDE04G0667 Ceratophyllum demersum
CDE04G0983 Ceratophyllum demersum
CDE04G2082 Ceratophyllum demersum
Cfa001174 Carpinus fangiana
Ciclev10030128m.g Citrus clementina
CiPaw.01G308100 Carya illinoinensis
ClCG03G006970 Citrullus lanatus
COL.COLO4_19504 Corchorus olitorius
COL.COLO4_24988 Corchorus olitorius
Cpa.g.sc41.42 Carica papaya
Cpa.g.sc41.43 Carica papaya
Cpa.g.sc41.44 Carica papaya
Cpa.g.sc41.45 Carica papaya
CsaV3_1G032540 Cucumis sativus L.
CSS0015014 Camellia sinensis var. sinensis
CSS0024281 Camellia sinensis var. sinensis
CSS0035505 Camellia sinensis var. sinensis
DCAR_018065 Daucus carota
Dinv21875 Davidia involucrata
Duzib066G0005 Durio zibethinus
ECA232G3941 Erigeron canadensis
EL10Ac2g02700 Beta vulgaris
Eucgr.E00005 Eucalyptus grandis
Eucgr.E04345 Eucalyptus grandis
Eucgr.H00237 Eucalyptus grandis
Eucgr.L02747 Eucalyptus grandis
FAN01G0671 Fragaria x ananassa
FAN03G0809 Fragaria x ananassa
FAN06G1899 Fragaria x ananassa
FAN10G0852 Fragaria x ananassa
FvH4_7g26380 Fragaria vesca
Glyma.04G225100 Glycine max
Glyma.06G139600 Glycine max
Gohir.A13G008900 Gossypium hirsutum
Gohir.D13G009600 Gossypium hirsutum
Gorai.013G010300 Gossypium raimondii
GSVIVG01032876001 Vitis vinifera
HanXRQChr09g0252351 Helianthus annuus
Haze_17388 Corylus avellana
Haze_17389 Corylus avellana
Haze_17390 Corylus avellana
Hma1.2p1_0264F.1_g105700 Hydrangea macrophylla
Hma1.2p1_0264F.1_g105710 Hydrangea macrophylla
HPP92_022562 Vanilla planifolia
Hund15772 Selenicereus undatus
Lalb_Chr23g0272061 Lupinus albus
Lj1C971G13 Lonicera japonica
Lj1g0017160 Lotus japonicus
Lsat_1_v5_gn_9_60521 Lactuca sativa
Manes.18G121600 Manihot esculenta
Mapoly0086s0022 Marchantia polymorpha
MBI17_g23520_MAGBIO Magnolia biondii
MCO04G530 Micromonas commoda
MCO07G620 Micromonas commoda
MD07G1239100 Malus domestica
Medtr3g093440 Medicago truncatula
MELO3C002725.2 Cucumis melo
Migut.F00557 Erythranthe guttata
Nitab4.5_0000103g0070 Nicotiana tabacum
Nitab4.5_0001130g0030 Nicotiana tabacum
Nn5g26734 Nelumbo nucifera
Oeu008098.1 Olea europaea
Os10g0506800 Oryza sativa ssp. japonica
Peaxi162Scf00073g02026 Petunia axillaris
Peaxi162Scf00073g02027 Petunia axillaris
PGR083G1109 Punica granatum
Phvul.009G040900 Phaseolus vulgaris
Potri.016G144200 Populus trichocarpa
Pp3c22_7900 Physcomitrium patens
Prupe.1G112300 Prunus persica
Prupe.1G112400 Prunus persica
Prupe.2G267900 Prunus persica
Psat5g070400 Pisum sativum
PSO339G4695 Papaver somniferum
RcHm_v2.0_Chr1g0372931 Rosa chinensis
Rhsim03G0155100 Rhododendron simsii
Sabra04G0160100 Salix brachista
SalBow3G4308 Salvia bowleyana
Sc10g0003140 Simmondsia chinensis
Sed0013074 Sechium edule
SEGI_39178 Sequoiadendron giganteum
SGA_v2.0_scaffold60G20866 Striga asiatica
SHI08066 Sapria himalayana
SHI11682 Sapria himalayana
SHI14060 Sapria himalayana
SHI17552 Sapria himalayana
SHI17634 Sapria himalayana
SHI22850 Sapria himalayana
SHI23134 Sapria himalayana
SHI23664 Sapria himalayana
SMO139G0018 Selaginella moellendorffii
SMO165G0048 Selaginella moellendorffii
SMO240G0007 Selaginella moellendorffii
SMO240G0041 Selaginella moellendorffii
SMO340G0011 Selaginella moellendorffii
Solyc03g095230.2 Solanum lycopersicum
Sopen03g025240 Solanum pennellii
Sp1g28850 Schrenkiella parvula
TAR369G0313 Trochodendron aralioides
THA.LOC104813079 Tarenaya hassleriana
Thecc.10G188500 Theobroma cacao
Thecc.10G188600 Theobroma cacao
Thecc.10G188900 Theobroma cacao
Thhalv10006832m.g Eutrema salsugineum
TPR.G13972 Trifolium pratense
TWI60G0946 Tripterygium wilfordii
TWI75G0267 Tripterygium wilfordii
unitig_37.g12479 Utricularia gibba
vmacro06868 Vaccinium macrocarpon
vmacro06869 Vaccinium macrocarpon
VMungo1309G2057 Vigna mungo
VMungo1309G2865 Vigna mungo
VMungo1309G2981 Vigna mungo
Zm00001eb044040 Zea mays

User provided reference genes

Program Settings