Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p15610 Brassica napus
Aa31LG7G8740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4296 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis
Actinidia04685 Actinidia chinensis
Actinidia04686 Actinidia chinensis
Actinidia04726 Actinidia chinensis
Actinidia04727 Actinidia chinensis
Actinidia19906 Actinidia chinensis
Actinidia27764 Actinidia chinensis
Actinidia31976 Actinidia chinensis
Actinidia38362 Actinidia chinensis
Ah.03g138670 Amaranthus hybridus
AL2G28120 Arabidopsis lyrata
Aqoxy3G03719 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea
AT1G69070 Arabidopsis thaliana
ATR0735G001 Amborella trichopoda
ATR0827G008 Amborella trichopoda
Atru.BG.298.p Acer truncatum
AUR62003071 Chenopodium quinoa
AUR62007885 Chenopodium quinoa
BcaC03g15030 Brassica carinata
BolC2t08646H Brassica oleracea
BolC2t08648H Brassica oleracea
BraA02t06622Z Brassica rapa
C02p25770 Brassica napus
C02p25790 Brassica napus
CAN.G1021.25 Capsicum annuum
CAN.G1021.26 Capsicum annuum
CANSAT64G2735 Cannabis sativa
CARHR061950 Cardamine hirsuta
Carub.0002s1569 Capsella rubella
Ca_12009_v3 Cicer arietinum L.
CBR_g4135 Chara braunii
Cc11_g11690 Coffea canephora
CDE10G1236 Ceratophyllum demersum
Cfa008853 Carpinus fangiana
Ciclev10030646m.g Citrus clementina
CiPaw.06G094100 Carya illinoinensis
ClCG08G010550 Citrullus lanatus
COL.COLO4_27840 Corchorus olitorius
Cpa.g.sc1.164 Carica papaya
Cre06.g260850 Chlamydomonas reinhardtii
CsaV3_6G033830 Cucumis sativus L.
CSS0013036 Camellia sinensis var. sinensis
DCAR_022184 Daucus carota
Dinv20143 Davidia involucrata
Dinv34035 Davidia involucrata
Duzib251G0783 Durio zibethinus
ECA233G1780 Erigeron canadensis
EL10Ac3g06594 Beta vulgaris
EL10Ac6g14485 Beta vulgaris
EL10Ac6g14694 Beta vulgaris
Eucgr.B03138 Eucalyptus grandis
FAN07G0902 Fragaria x ananassa
FAN12G1456 Fragaria x ananassa
FAN17G0509 Fragaria x ananassa
FAN22G0359 Fragaria x ananassa
FvH4_4g29570 Fragaria vesca
Glyma.02G003100 Glycine max
Glyma.10G005700 Glycine max
Glyma.18G236167 Glycine max
Glyma.18G236233 Glycine max
Gohir.A04G145600 Gossypium hirsutum
Gohir.D04G190100 Gossypium hirsutum
Gorai.012G185400 Gossypium raimondii
GSVIVG01012255001 Vitis vinifera
HanXRQChr06g0168931 Helianthus annuus
Haze_11873 Corylus avellana
HPP92_012261 Vanilla planifolia
Lalb_Chr25g0284481 Lupinus albus
Lj6A775T24 Lonicera japonica
Lj6g0000403 Lotus japonicus
Lsat_1_v5_gn_8_35620 Lactuca sativa
Manes.17G024283 Manihot esculenta
Mapoly0013s0047 Marchantia polymorpha
MBI19_g00156_MAGBIO Magnolia biondii
MCO13G646 Micromonas commoda
MD13G1058800 Malus domestica
MD13G1058900 Malus domestica
MD16G1058200 Malus domestica
Medtr1g064300 Medicago truncatula
Medtr1g442820 Medicago truncatula
Medtr1g442830 Medicago truncatula
MELO3C011408.2 Cucumis melo
Migut.E00244 Erythranthe guttata
MSTRG.13461 Avicennia marina
Nitab4.5_0000027g0110 Nicotiana tabacum
Nitab4.5_0000027g0130 Nicotiana tabacum
Nitab4.5_0011617g0010 Nicotiana tabacum
Nn4g23518 Nelumbo nucifera
Oeu019000.3 Olea europaea
Oeu048129.1 Olea europaea
Oeu063767.1 Olea europaea
Os03g0598200 Oryza sativa ssp. japonica
Peaxi162Scf00175g00927 Petunia axillaris
PGR102G1068 Punica granatum
PGSC0003DMG400028356 Solanum tuberosum
Phvul.007G274500 Phaseolus vulgaris
Potri.010G140100 Populus trichocarpa
Pp3c13_7740 Physcomitrium patens
PRCOL_00006390 Prasinoderma coloniale
Prupe.1G290900 Prunus persica
Psat1g047040 Pisum sativum
PSO063G4789 Papaver somniferum
PSO782G4088 Papaver somniferum
RcHm_v2.0_Chr1g0340811 Rosa chinensis
RcHm_v2.0_Chr4g0437801 Rosa chinensis
Rhsim04G0142900 Rhododendron simsii
Rhsim04G0143200 Rhododendron simsii
Rhsim10G0117800 Rhododendron simsii
Rhsim10G0117900 Rhododendron simsii
Rhsim12G0073500 Rhododendron simsii
Sabra10G0108200 Salix brachista
SalBow4G3252 Salvia bowleyana
Sc04g0007400 Simmondsia chinensis
Sed0010809 Sechium edule
SEGI_03778 Sequoiadendron giganteum
SEGI_11983 Sequoiadendron giganteum
SEGI_13774 Sequoiadendron giganteum
SEGI_15727 Sequoiadendron giganteum
SEGI_23631 Sequoiadendron giganteum
SEGI_26642 Sequoiadendron giganteum
SEGI_27898 Sequoiadendron giganteum
SGA_v2.0_scaffold287G47183 Striga asiatica
Solyc05g011990.4 Solanum lycopersicum
Sopen05g006740 Solanum pennellii
Sp5g24170 Schrenkiella parvula
TAR623G0736 Trochodendron aralioides
TAR623G0992 Trochodendron aralioides
TAR623G1540 Trochodendron aralioides
TAR627G0787 Trochodendron aralioides
TAR627G1107 Trochodendron aralioides
TAR629G1217 Trochodendron aralioides
THA.LOC104821991 Tarenaya hassleriana
Thecc.02G325500 Theobroma cacao
Thhalv10018096m.g Eutrema salsugineum
TPR.G25170 Trifolium pratense
TPR.G25179 Trifolium pratense
TWI79G0207 Tripterygium wilfordii
unitig_62.g23698 Utricularia gibba
unitig_62.g23699 Utricularia gibba
VMungo0720G2226 Vigna mungo
Zm00001eb049910 Zea mays

User provided reference genes

Program Settings