Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p23250 Brassica napus
A09p44970 Brassica napus
Aa31LG10G9090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1146 Anthoceros agrestis
Actinidia05359 Actinidia chinensis
Ah.12g058810 Amaranthus hybridus
AL5G32280 Arabidopsis lyrata
Aqoxy2G00847 Aquilegia oxysepala
Aqoxy4G02498 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8A66NB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F5Z0S5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I63G1M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IR2XKV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XTCX6A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJ5G8U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z8S8NK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZW8CA6 Arachis hypogaea
AT3G51820 Arabidopsis thaliana
ATR0681G392 Amborella trichopoda
Atru.chr8.2269 Acer truncatum
AUR62030480 Chenopodium quinoa
AUR62030817 Chenopodium quinoa
BcaB01g00414 Brassica carinata
BcaB01g00474 Brassica carinata
BcaC09g50106 Brassica carinata
BcaNung00368 Brassica carinata
BolC1t02821H Brassica oleracea
BolC8t50320H Brassica oleracea
BraA01t02235Z Brassica rapa
BraA09t39957Z Brassica rapa
C01p28890 Brassica napus
C08p27050 Brassica napus
CAN.G283.14 Capsicum annuum
CANSAT35G0589 Cannabis sativa
CARHR161450 Cardamine hirsuta
Carub.0005s1817 Capsella rubella
Ca_07660_v3 Cicer arietinum L.
CBR_g38410 Chara braunii
Cc06_g01120 Coffea canephora
CDE04G1685 Ceratophyllum demersum
CDE04G2983 Ceratophyllum demersum
CDE08G0537 Ceratophyllum demersum
Cfa017182 Carpinus fangiana
Cfa017183 Carpinus fangiana
Ciclev10011985m.g Citrus clementina
CiPaw.09G211300 Carya illinoinensis
CiPaw.10G157700 Carya illinoinensis
ClCG04G006920 Citrullus lanatus
COL.COLO4_03385 Corchorus olitorius
COL.COLO4_19973 Corchorus olitorius
Cpa.g.sc11.77 Carica papaya
Cre06.g294750 Chlamydomonas reinhardtii
CsaV3_4G026340 Cucumis sativus L.
CSS0018345 Camellia sinensis var. sinensis
DCAR_015394 Daucus carota
Dinv01710 Davidia involucrata
Dinv04461 Davidia involucrata
Dinv05780 Davidia involucrata
Dinv13159 Davidia involucrata
Duzib093G0784 Durio zibethinus
Duzib128G1618 Durio zibethinus
ECA236G0379 Erigeron canadensis
EL10Ac5g12540 Beta vulgaris
Eucgr.A00535 Eucalyptus grandis
FAN02G4369 Fragaria x ananassa
FAN05G3727 Fragaria x ananassa
FAN09G0084 Fragaria x ananassa
FAN09G0733 Fragaria x ananassa
FAN14G2181 Fragaria x ananassa
FAN14G4537 Fragaria x ananassa
FvH4_6g11190 Fragaria vesca
Glyma.07G152300 Glycine max
Glyma.16G098000 Glycine max
Glyma.18G203400 Glycine max
Gohir.A04G092900 Gossypium hirsutum
Gohir.D04G132200 Gossypium hirsutum
Gorai.012G116000 Gossypium raimondii
GSVIVG01011187001 Vitis vinifera
HanXRQChr06g0182231 Helianthus annuus
Haze_21025 Corylus avellana
Hma1.2p1_0362F.1_g136490 Hydrangea macrophylla
HPP92_013785 Vanilla planifolia
HPP92_013874 Vanilla planifolia
Hund14874 Selenicereus undatus
Lalb_Chr19g0124421 Lupinus albus
Lj1g0026131 Lotus japonicus
Lj2C71T11 Lonicera japonica
Lj3A950T42 Lonicera japonica
Lsat_1_v5_gn_8_101501 Lactuca sativa
Manes.09G106900 Manihot esculenta
Mapoly0045s0080 Marchantia polymorpha
MBI15_g19417_MAGBIO Magnolia biondii
MCO16G058 Micromonas commoda
MD00G1061800 Malus domestica
MD12G1171900 Malus domestica
Medtr7g069210 Medicago truncatula
Medtr7g069400 Medicago truncatula
MELO3C026000.2 Cucumis melo
Migut.J00141 Erythranthe guttata
MSTRG.18996 Avicennia marina
Nitab4.5_0000261g0130 Nicotiana tabacum
Nitab4.5_0008676g0010 Nicotiana tabacum
Nn2g10892 Nelumbo nucifera
Nn2g13169 Nelumbo nucifera
Oeu017800.1 Olea europaea
Oeu038754.1 Olea europaea
Os05g0349700 Oryza sativa ssp. japonica
Peaxi162Scf00890g00119 Petunia axillaris
PGR031G0770 Punica granatum
PGSC0003DMG400008481 Solanum tuberosum
Phvul.008G096500 Phaseolus vulgaris
Potri.006G102100 Populus trichocarpa
Potri.016G119400 Populus trichocarpa
Pp3c13_13830 Physcomitrium patens
PRCOL_00003234 Prasinoderma coloniale
Prupe.4G268700 Prunus persica
Prupe.6G280100 Prunus persica
Psat3g126440 Pisum sativum
PSO339G4053 Papaver somniferum
PSO339G5814 Papaver somniferum
PSO384G4055 Papaver somniferum
PSO801G0614 Papaver somniferum
QL07p035079 Quercus lobata
RcHm_v2.0_Chr3g0462631 Rosa chinensis
Rhsim04G0126400 Rhododendron simsii
Rhsim04G0126500 Rhododendron simsii
Sabra06G0078400 Salix brachista
Sabra16G0115300 Salix brachista
SalBow5G3053 Salvia bowleyana
Sc07g0006700 Simmondsia chinensis
Sed0025380 Sechium edule
SEGI_30165 Sequoiadendron giganteum
SMO271G0089 Selaginella moellendorffii
Solyc09g014760.4 Solanum lycopersicum
Sopen09g007610 Solanum pennellii
Sp5g10450 Schrenkiella parvula
TAR633G2528 Trochodendron aralioides
TAR636G3470 Trochodendron aralioides
THA.LOC104805975 Tarenaya hassleriana
Thecc.05G012600 Theobroma cacao
Thhalv10010408m.g Eutrema salsugineum
TPR.G35446 Trifolium pratense
TWI74G0606 Tripterygium wilfordii
unitig_578.g15901 Utricularia gibba
vmacro08889 Vaccinium macrocarpon
vmacro08890 Vaccinium macrocarpon
VMungo1383G0980 Vigna mungo
Zm00001eb286140 Zea mays

User provided reference genes

Program Settings