Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25430 Brassica napus
A04p17020 Brassica napus
A04p34210 Brassica napus
A05p05990 Brassica napus
Aa31LG1G27410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1428 Anthoceros agrestis
Actinidia10042 Actinidia chinensis
Actinidia20894 Actinidia chinensis
Ah.05g180490 Amaranthus hybridus
AL4G45230 Arabidopsis lyrata
Aqoxy7G00275 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C7F7IC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EZF1CG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PAI5YG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.US4SCG Arachis hypogaea
AT2G46000 Arabidopsis thaliana
ATR0680G399 Amborella trichopoda
Atru.chr3.1868 Acer truncatum
Atru.chr3.1882 Acer truncatum
Atru.chr5.513 Acer truncatum
AUR62004377 Chenopodium quinoa
AUR62022583 Chenopodium quinoa
BcaB01g03242 Brassica carinata
BcaC01g05100 Brassica carinata
BcaC02g07785 Brassica carinata
BcaC02g08371 Brassica carinata
BcaC02g12158 Brassica carinata
BolC3t15383H Brassica oleracea
BolC4t22313H Brassica oleracea
BolC4t28699H Brassica oleracea
BraA03t11762Z Brassica rapa
BraA04t18882Z Brassica rapa
BraA05t19562Z Brassica rapa
BraA08t32322Z Brassica rapa
C03p30330 Brassica napus
C04p06920 Brassica napus
C04p72030 Brassica napus
C09p26600 Brassica napus
CAN.G116.15 Capsicum annuum
CANSAT25G0788 Cannabis sativa
CANSAT56G0390 Cannabis sativa
CARHR141270 Cardamine hirsuta
Carub.0004s2870 Capsella rubella
Ca_07933_v3 Cicer arietinum L.
CBR_g3867 Chara braunii
Cc02_g38190 Coffea canephora
CDE09G1157 Ceratophyllum demersum
Cfa003905 Carpinus fangiana
Cfa010782 Carpinus fangiana
Ciclev10006561m.g Citrus clementina
Ciclev10022241m.g Citrus clementina
CiPaw.02G032200 Carya illinoinensis
ClCG05G001460 Citrullus lanatus
COL.COLO4_12727 Corchorus olitorius
Cpa.g.sc11.21 Carica papaya
DCAR_007443 Daucus carota
DCAR_015106 Daucus carota
Dinv32494 Davidia involucrata
Duzib138G1785 Durio zibethinus
ECA234G2903 Erigeron canadensis
ECA236G3403 Erigeron canadensis
EL10Ac1g00399 Beta vulgaris
Eucgr.E00119 Eucalyptus grandis
FAN01G1655 Fragaria x ananassa
FAN03G1762 Fragaria x ananassa
FAN06G0569 Fragaria x ananassa
FAN06G2873 Fragaria x ananassa
FAN10G3452 Fragaria x ananassa
FAN10G4091 Fragaria x ananassa
FvH4_7g14630 Fragaria vesca
Glyma.09G258300 Glycine max
Glyma.18G234400 Glycine max
Gohir.A07G141900 Gossypium hirsutum
Gohir.D07G147300 Gossypium hirsutum
Gorai.001G168500 Gossypium raimondii
GSVIVG01026950001 Vitis vinifera
HanXRQChr04g0121191 Helianthus annuus
HanXRQChr06g0170181 Helianthus annuus
HanXRQChr16g0522391 Helianthus annuus
Haze_01381 Corylus avellana
Haze_15525 Corylus avellana
Hma1.2p1_0780F.1_g216740 Hydrangea macrophylla
HPP92_025966 Vanilla planifolia
Lalb_Chr04g0253811 Lupinus albus
Lj1g0018179 Lotus japonicus
Lj7A510T39 Lonicera japonica
Lsat_1_v5_gn_4_35880 Lactuca sativa
Lsat_1_v5_gn_7_18681 Lactuca sativa
Lsat_1_v5_gn_7_4161 Lactuca sativa
Manes.01G255500 Manihot esculenta
Manes.05G033100 Manihot esculenta
Mapoly0023s0066 Marchantia polymorpha
MBI18_g02833_MAGBIO Magnolia biondii
MCO07G199 Micromonas commoda
MD01G1065300 Malus domestica
MD07G1135200 Malus domestica
Medtr7g077890 Medicago truncatula
MELO3C006103.2 Cucumis melo
Migut.B01770 Erythranthe guttata
MSTRG.20842 Avicennia marina
Nitab4.5_0000386g0020 Nicotiana tabacum
Nitab4.5_0000583g0210 Nicotiana tabacum
Nitab4.5_0002811g0020 Nicotiana tabacum
Nitab4.5_0006018g0040 Nicotiana tabacum
Nn1g01568 Nelumbo nucifera
Oeu052955.1 Olea europaea
Os03g0148300 Oryza sativa ssp. japonica
Peaxi162Scf00008g02424 Petunia axillaris
Peaxi162Scf00020g00731 Petunia axillaris
PGR042G1182 Punica granatum
PGSC0003DMG400000176 Solanum tuberosum
PGSC0003DMG400006503 Solanum tuberosum
Phvul.008G061400 Phaseolus vulgaris
Potri.014G086200 Populus trichocarpa
Pp3c14_2680 Physcomitrium patens
Prupe.2G172500 Prunus persica
Psat3g107720 Pisum sativum
PSO210G4593 Papaver somniferum
PSO832G0747 Papaver somniferum
QL04p053899 Quercus lobata
QL04p053913 Quercus lobata
RcHm_v2.0_Chr1g0356151 Rosa chinensis
RcHm_v2.0_Chr1g0356451 Rosa chinensis
Rhsim07G0013700 Rhododendron simsii
Sabra14G0062500 Salix brachista
SalBow3G2695 Salvia bowleyana
Sc23g0002800 Simmondsia chinensis
Sed0007874 Sechium edule
SEGI_06430 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28829 Striga asiatica
SMO203G0053 Selaginella moellendorffii
Solyc01g094780.4 Solanum lycopersicum
Solyc10g012400.3 Solanum lycopersicum
Sopen10g006230 Solanum pennellii
Sp4g28070 Schrenkiella parvula
TAR374G1129 Trochodendron aralioides
TAR375G0288 Trochodendron aralioides
THA.LOC104802036 Tarenaya hassleriana
THA.LOC104817298 Tarenaya hassleriana
Thecc.01G357500 Theobroma cacao
Thhalv10001635m.g Eutrema salsugineum
TPR.G37810 Trifolium pratense
TWI23G0157 Tripterygium wilfordii
unitig_26.g9301 Utricularia gibba
vmacro13267 Vaccinium macrocarpon
VMungo1383G1301 Vigna mungo
Zm00001eb003870 Zea mays
Zm00001eb402990 Zea mays

User provided reference genes

Program Settings