Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p10690 Brassica napus
Aa31LG2G2890 Aethionema arabicum
Aa31LG9G17510 Aethionema arabicum
Actinidia06484 Actinidia chinensis
Actinidia17201 Actinidia chinensis
AL2G23855 Arabidopsis lyrata
AL7G46300 Arabidopsis lyrata
AT1G66180 Arabidopsis thaliana
AT5G37540 Arabidopsis thaliana
ATR0602G149 Amborella trichopoda
BcaB06g27089 Brassica carinata
BcaC02g09581 Brassica carinata
BolC4t26011H Brassica oleracea
BraA04t16735Z Brassica rapa
C04p44400 Brassica napus
CAN.G222.60 Capsicum annuum
CAN.G733.9 Capsicum annuum
CANSAT64G1220 Cannabis sativa
CARHR215360 Cardamine hirsuta
CARHR292270 Cardamine hirsuta
Carub.0002s1217 Capsella rubella
Carub.0007s3271 Capsella rubella
Ca_05836_v3 Cicer arietinum L.
Ca_17088_v3 Cicer arietinum L.
Cc07_g13250 Coffea canephora
CDE04G0361 Ceratophyllum demersum
CDE05G0155 Ceratophyllum demersum
CDE05G0782 Ceratophyllum demersum
CDE06G0793 Ceratophyllum demersum
Cfa007790 Carpinus fangiana
Cfa012597 Carpinus fangiana
Ciclev10011736m.g Citrus clementina
CiPaw.03G073800 Carya illinoinensis
ClCG05G010630 Citrullus lanatus
COL.COLO4_13427 Corchorus olitorius
Cpa.g.sc340.1 Carica papaya
CsaV3_3G017860 Cucumis sativus L.
CsaV3_3G017870 Cucumis sativus L.
CSS0032946 Camellia sinensis var. sinensis
CSS0036125 Camellia sinensis var. sinensis
DCAR_003423 Daucus carota
DCAR_014160 Daucus carota
Dinv19047 Davidia involucrata
Dinv28180 Davidia involucrata
Duzib133G0119 Durio zibethinus
Duzib138G0840 Durio zibethinus
ECA238G2997 Erigeron canadensis
Eucgr.J01620 Eucalyptus grandis
FAN19G0468 Fragaria x ananassa
FAN23G2715 Fragaria x ananassa
FAN26G0649 Fragaria x ananassa
FAN28G1800 Fragaria x ananassa
FvH4_1g30150 Fragaria vesca
Glyma.02G243600 Glycine max
Glyma.11G215200 Glycine max
Glyma.14G212700 Glycine max
Glyma.18G041400 Glycine max
Gohir.A08G039100 Gossypium hirsutum
Gohir.D08G049300 Gossypium hirsutum
Gorai.004G048800 Gossypium raimondii
GSVIVG01030675001 Vitis vinifera
HanXRQChr14g0457311 Helianthus annuus
Haze_14282 Corylus avellana
Hma1.2p1_0158F.1_g070050 Hydrangea macrophylla
Hma1.2p1_1214F.1_g267570 Hydrangea macrophylla
Lalb_Chr10g0104271 Lupinus albus
Lalb_Chr15g0085001 Lupinus albus
Lj2P518T18 Lonicera japonica
Lj4P259T19 Lonicera japonica
Lj6g0002459 Lotus japonicus
LjContig00141g0020872 Lotus japonicus
Lsat_1_v5_gn_2_68440 Lactuca sativa
Manes.01G120000 Manihot esculenta
Manes.02G078400 Manihot esculenta
MBI18_g16984_MAGBIO Magnolia biondii
MBI19_g10112_MAGBIO Magnolia biondii
MD09G1270000 Malus domestica
MD17G1268100 Malus domestica
Medtr3g065160 Medicago truncatula
Medtr5g077850 Medicago truncatula
Medtr5g077920 Medicago truncatula
MELO3C020328.2 Cucumis melo
Migut.H02230 Erythranthe guttata
Migut.K00925 Erythranthe guttata
MSTRG.2626 Avicennia marina
MSTRG.3700 Avicennia marina
Nitab4.5_0000777g0020 Nicotiana tabacum
Nitab4.5_0001650g0030 Nicotiana tabacum
Nitab4.5_0006562g0030 Nicotiana tabacum
Nitab4.5_0010055g0020 Nicotiana tabacum
Nn3g18373 Nelumbo nucifera
Nn4g24397 Nelumbo nucifera
Oeu012496.1 Olea europaea
Oeu030294.1 Olea europaea
Oeu060828.1 Olea europaea
Oeu060829.1 Olea europaea
Oeu062711.1 Olea europaea
Peaxi162Scf00424g00053 Petunia axillaris
Peaxi162Scf00562g00001 Petunia axillaris
PGR042G0788 Punica granatum
PGSC0003DMG400013307 Solanum tuberosum
PGSC0003DMG400014607 Solanum tuberosum
Phvul.001G229200 Phaseolus vulgaris
Phvul.008G237800 Phaseolus vulgaris
Potri.004G085000 Populus trichocarpa
Potri.017G131800 Populus trichocarpa
Prupe.3G165900 Prunus persica
Psat2g045400 Pisum sativum
Psat5g120200 Pisum sativum
PSO017G0312 Papaver somniferum
PSO478G2237 Papaver somniferum
QL02p059364 Quercus lobata
RcHm_v2.0_Chr3g0491651 Rosa chinensis
Rhsim10G0179500 Rhododendron simsii
Sabra04G0056200 Salix brachista
Sabra17G0109700 Salix brachista
SalBow3G4360 Salvia bowleyana
SalBow5G1251 Salvia bowleyana
Sc20g0006680 Simmondsia chinensis
Sed0009661 Sechium edule
Sed0011035 Sechium edule
Sed0011204 Sechium edule
SGA_v2.0_scaffold108G30964 Striga asiatica
SGA_v2.0_scaffold45G17144 Striga asiatica
Solyc05g051240.1 Solanum lycopersicum
Solyc11g011440.1 Solanum lycopersicum
Sopen05g029620 Solanum pennellii
Sopen11g006230 Solanum pennellii
Sp5g21240 Schrenkiella parvula
Sp7g04610 Schrenkiella parvula
TAR371G0873 Trochodendron aralioides
TAR629G1901 Trochodendron aralioides
THA.LOC104805634 Tarenaya hassleriana
THA.LOC104822252 Tarenaya hassleriana
Thecc.04G054200 Theobroma cacao
Thhalv10018599m.g Eutrema salsugineum
Thhalv10028350m.g Eutrema salsugineum
TPR.G23673 Trifolium pratense
TPR.G24892 Trifolium pratense
TWI74G1232 Tripterygium wilfordii
unitig_0.g2643 Utricularia gibba
unitig_32.g10718 Utricularia gibba
unitig_32.g10719 Utricularia gibba
unitig_32.g11791 Utricularia gibba
unitig_748.g7249 Utricularia gibba
unitig_748.g8464 Utricularia gibba
unitig_748.g8634 Utricularia gibba
VMungo0647G2036 Vigna mungo
VMungo1383G2276 Vigna mungo

User provided reference genes

Program Settings