Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25190 Brassica napus
Aa31LG2G21460 Aethionema arabicum
Aa31LG6G660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.549 Anthoceros agrestis
Actinidia25973 Actinidia chinensis
Ah.12g055170 Amaranthus hybridus
AL7G36600 Arabidopsis lyrata
Aqoxy3G00659 Aquilegia oxysepala
Aqoxy3G01363 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.78T75P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M3M86A Arachis hypogaea
AT4G17910 Arabidopsis thaliana
ATR0665G211 Amborella trichopoda
Atru.chr6.1656 Acer truncatum
AUR62007303 Chenopodium quinoa
AUR62018700 Chenopodium quinoa
BcaB01g03270 Brassica carinata
BcaC01g05139 Brassica carinata
BolC3t15350H Brassica oleracea
BraA03t11719Z Brassica rapa
C03p30030 Brassica napus
CAN.G298.24 Capsicum annuum
CANSAT21G1226 Cannabis sativa
CARHR224640 Cardamine hirsuta
Carub.0007s2343 Capsella rubella
Ca_14051_v3 Cicer arietinum L.
CBR_g46224 Chara braunii
Cc08_g02960 Coffea canephora
CDE06G2155 Ceratophyllum demersum
Cfa012457 Carpinus fangiana
Cfa022893 Carpinus fangiana
Ciclev10031452m.g Citrus clementina
CiPaw.12G064900 Carya illinoinensis
ClCG10G001480 Citrullus lanatus
COL.COLO4_17003 Corchorus olitorius
Cpa.g.sc34.32 Carica papaya
Cre13.g587200 Chlamydomonas reinhardtii
CsaV3_3G001560 Cucumis sativus L.
CSS0006782 Camellia sinensis var. sinensis
CSS0020726 Camellia sinensis var. sinensis
DCAR_008253 Daucus carota
DCAR_028920 Daucus carota
Dinv28969 Davidia involucrata
Duzib068G0117 Durio zibethinus
ECA233G0790 Erigeron canadensis
EL10Ac5g12089 Beta vulgaris
Eucgr.E00272 Eucalyptus grandis
FAN04G2495 Fragaria x ananassa
FAN13G2248 Fragaria x ananassa
FAN18G2708 Fragaria x ananassa
FAN18G3647 Fragaria x ananassa
FvH4_5g22370 Fragaria vesca
Glyma.01G095566 Glycine max
Glyma.08G270900 Glycine max
Gohir.A01G164900 Gossypium hirsutum
Gohir.A02G048600 Gossypium hirsutum
Gohir.A03G000052 Gossypium hirsutum
Gohir.A03G116100 Gossypium hirsutum
Gohir.A04G065628 Gossypium hirsutum
Gohir.A05G283800 Gossypium hirsutum
Gohir.A06G130506 Gossypium hirsutum
Gohir.A09G031300 Gossypium hirsutum
Gohir.A12G128750 Gossypium hirsutum
Gohir.D03G172700 Gossypium hirsutum
Gorai.003G183400 Gossypium raimondii
GSVIVG01013143001 Vitis vinifera
HanXRQChr02g0049971 Helianthus annuus
Haze_08210 Corylus avellana
Hma1.2p1_0120F.1_g057130 Hydrangea macrophylla
HPP92_016910 Vanilla planifolia
Hund11225 Selenicereus undatus
Lalb_Chr05g0228811 Lupinus albus
Lj4g0000928 Lotus japonicus
Lj8A304G48 Lonicera japonica
Lj8A304G49 Lonicera japonica
Lsat_1_v5_gn_6_4100 Lactuca sativa
Manes.17G017708 Manihot esculenta
Mapoly0029s0019 Marchantia polymorpha
MBI04_g33882_MAGBIO Magnolia biondii
MBI04_g33883_MAGBIO Magnolia biondii
MD00G1071700 Malus domestica
MD06G1036000 Malus domestica
MD06G1036200 Malus domestica
MD09G1215500 Malus domestica
Medtr1g100910 Medicago truncatula
Medtr8g066760 Medicago truncatula
MELO3C013842.2 Cucumis melo
Migut.L01002 Erythranthe guttata
Migut.L01003 Erythranthe guttata
Migut.O00927 Erythranthe guttata
MSTRG.7638 Avicennia marina
MSTRG.865 Avicennia marina
Nitab4.5_0000711g0030 Nicotiana tabacum
Nitab4.5_0000711g0040 Nicotiana tabacum
Nitab4.5_0002773g0060 Nicotiana tabacum
Nitab4.5_0003568g0040 Nicotiana tabacum
Nitab4.5_0005651g0010 Nicotiana tabacum
Nn1g00131 Nelumbo nucifera
Oeu048371.1 Olea europaea
Os03g0378200 Oryza sativa ssp. japonica
Peaxi162Scf00236g00034 Petunia axillaris
PGR042G3443 Punica granatum
PGSC0003DMG400017506 Solanum tuberosum
PGSC0003DMG400017507 Solanum tuberosum
PGSC0003DMG400017541 Solanum tuberosum
Phvul.003G284400 Phaseolus vulgaris
Potri.003G093300 Populus trichocarpa
Pp3c15_10960 Physcomitrium patens
Pp3c15_11030 Physcomitrium patens
Pp3s205_40 Physcomitrium patens
PRCOL_00001577 Prasinoderma coloniale
Prupe.5G033200 Prunus persica
Psat0ss26165g0120 Pisum sativum
Psat4g121520 Pisum sativum
Psat7g200760 Pisum sativum
PSO063G1669 Papaver somniferum
PSO782G4101 Papaver somniferum
QL12p004876 Quercus lobata
RcHm_v2.0_Chr7g0210111 Rosa chinensis
Rhsim11G0016800 Rhododendron simsii
Rhsim11G0048300 Rhododendron simsii
Sabra03G0062700 Salix brachista
SalBow6G3319 Salvia bowleyana
SalBow8G0555 Salvia bowleyana
Sc01g0007370 Simmondsia chinensis
Sed0027872 Sechium edule
SEGI_29978 Sequoiadendron giganteum
SGA_v2.0_scaffold38G15014 Striga asiatica
SHI07305 Sapria himalayana
SMO351G0610 Selaginella moellendorffii
Solyc08g076810.4 Solanum lycopersicum
Sopen08g025330 Solanum pennellii
Sp4g27350 Schrenkiella parvula
TAR375G0033 Trochodendron aralioides
THA.LOC104812834 Tarenaya hassleriana
THA.LOC104827753 Tarenaya hassleriana
Thecc.03G225400 Theobroma cacao
Thhalv10001430m.g Eutrema salsugineum
TPR.G3324 Trifolium pratense
TPR.G3338 Trifolium pratense
TPR.G39375 Trifolium pratense
TPR.G40857 Trifolium pratense
TWI15G0747 Tripterygium wilfordii
unitig_0.g2339 Utricularia gibba
vmacro00318 Vaccinium macrocarpon
VMungo0251G0718 Vigna mungo
VMungo1309G0709 Vigna mungo
Zm00001eb018410 Zea mays
Zm00001eb392220 Zea mays

User provided reference genes

Program Settings