Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p13110 Brassica napus
Aa31LG6G3760 Aethionema arabicum
Actinidia26927 Actinidia chinensis
Ah.09g235060 Amaranthus hybridus
AL7G32150 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.9Z1Z9Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FJ4Y8F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PC5S43 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R1VD00 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T879FL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WBSQ2D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z4K8V6 Arachis hypogaea
AT4G21780 Arabidopsis thaliana
ATR0752G182 Amborella trichopoda
Atru.chr10.2180 Acer truncatum
BcaC09g51203 Brassica carinata
BcaNung02246 Brassica carinata
BolC1t01533H Brassica oleracea
BraA01t01254Z Brassica rapa
C01p15800 Brassica napus
CANSAT21G1815 Cannabis sativa
CANSAT56G2390 Cannabis sativa
CARHR228520 Cardamine hirsuta
Carub.0007s1962 Capsella rubella
Ca_00623_v3 Cicer arietinum L.
Cc09_g01920 Coffea canephora
Cfa000249 Carpinus fangiana
Ciclev10009906m.g Citrus clementina
Ciclev10016836m.g Citrus clementina
CiPaw.09G089400 Carya illinoinensis
CiPaw.10G069500 Carya illinoinensis
CiPaw.12G127900 Carya illinoinensis
ClCG01G022080 Citrullus lanatus
ClCG03G004870 Citrullus lanatus
COL.COLO4_31744 Corchorus olitorius
Cpa.g.sc198.27 Carica papaya
CsaV3_1G010900 Cucumis sativus L.
CsaV3_6G049140 Cucumis sativus L.
CSS0017416 Camellia sinensis var. sinensis
CSS0025190 Camellia sinensis var. sinensis
CSS0030561 Camellia sinensis var. sinensis
DCAR_008138 Daucus carota
DCAR_010042 Daucus carota
DCAR_022550 Daucus carota
Dinv13873 Davidia involucrata
Duzib192G0598 Durio zibethinus
Duzib235G0746 Durio zibethinus
Duzib268G1102 Durio zibethinus
EL10Ac8g20021 Beta vulgaris
Eucgr.D01305 Eucalyptus grandis
Eucgr.E04090 Eucalyptus grandis
Eucgr.F03448 Eucalyptus grandis
Eucgr.L03501 Eucalyptus grandis
FAN21G0406 Fragaria x ananassa
FAN25G3450 Fragaria x ananassa
FvH4_3g02450 Fragaria vesca
Glyma.02G289600 Glycine max
Glyma.07G259100 Glycine max
Glyma.13G206400 Glycine max
Glyma.14G025500 Glycine max
Glyma.17G015100 Glycine max
Glyma.18G101800 Glycine max
Gohir.A01G077800 Gossypium hirsutum
Gohir.A04G019200 Gossypium hirsutum
Gohir.A06G147400 Gossypium hirsutum
Gohir.D05G366700 Gossypium hirsutum
Gohir.D06G153200 Gossypium hirsutum
Gorai.002G086600 Gossypium raimondii
Gorai.009G425100 Gossypium raimondii
Gorai.010G179200 Gossypium raimondii
GSVIVG01002002001 Vitis vinifera
GSVIVG01012656001 Vitis vinifera
Hma1.2p1_0091F.1_g046260 Hydrangea macrophylla
Hma1.2p1_0813F.1_g222590 Hydrangea macrophylla
HPP92_011136 Vanilla planifolia
Lalb_Chr17g0348391 Lupinus albus
Lalb_Chr18g0056231 Lupinus albus
Lj4g0012462 Lotus japonicus
Lsat_1_v5_gn_7_17380 Lactuca sativa
Lsat_1_v5_gn_9_94121 Lactuca sativa
Manes.03G126800 Manihot esculenta
Manes.15G073800 Manihot esculenta
Manes.16G010000 Manihot esculenta
Manes.17G037200 Manihot esculenta
MBI18_g24808_MAGBIO Magnolia biondii
MD10G1317900 Malus domestica
Medtr2g022820 Medicago truncatula
Medtr4g131880 Medicago truncatula
Medtr5g092085 Medicago truncatula
MELO3C002469.2 Cucumis melo
MELO3C007381.2 Cucumis melo
Migut.M01366 Erythranthe guttata
Migut.M01784 Erythranthe guttata
MSTRG.12965 Avicennia marina
Nitab4.5_0010096g0060 Nicotiana tabacum
Nn1g07103 Nelumbo nucifera
Oeu037355.1 Olea europaea
Oeu051218.1 Olea europaea
Os03g0567100 Oryza sativa ssp. japonica
Peaxi162Scf00203g00113 Petunia axillaris
Peaxi162Scf00262g00051 Petunia axillaris
PGR042G3122 Punica granatum
PGSC0003DMG400016488 Solanum tuberosum
Phvul.003G077200 Phaseolus vulgaris
Phvul.006G038900 Phaseolus vulgaris
Phvul.006G151000 Phaseolus vulgaris
Phvul.008G265000 Phaseolus vulgaris
Phvul.008G265500 Phaseolus vulgaris
Potri.001G421100 Populus trichocarpa
Potri.004G018600 Populus trichocarpa
Potri.011G000400 Populus trichocarpa
Potri.011G136500 Populus trichocarpa
Prupe.4G023900 Prunus persica
Prupe.4G209300 Prunus persica
PSO675G1893 Papaver somniferum
QL05p074036 Quercus lobata
RcHm_v2.0_Chr5g0003701 Rosa chinensis
Rhsim04G0000900 Rhododendron simsii
Rhsim04G0002000 Rhododendron simsii
Rhsim06G0215300 Rhododendron simsii
Sabra11G0122600 Salix brachista
SalBow7G1414 Salvia bowleyana
Sc16g0006270 Simmondsia chinensis
Sc17g0007220 Simmondsia chinensis
Sed0000784 Sechium edule
Sed0003497 Sechium edule
Sed0007059 Sechium edule
Sed0025492 Sechium edule
SGA_v2.0_scaffold7G03870 Striga asiatica
Solyc02g080360.1 Solanum lycopersicum
Sopen02g025060 Solanum pennellii
Sp7g19950 Schrenkiella parvula
TAR624G0245 Trochodendron aralioides
THA.LOC104806295 Tarenaya hassleriana
Thecc.06G217500 Theobroma cacao
Thecc.07G043900 Theobroma cacao
Thhalv10027254m.g Eutrema salsugineum
TPR.G29123 Trifolium pratense
TPR.G37044 Trifolium pratense
TPR.G37097 Trifolium pratense
TPR.G7639 Trifolium pratense
TWI38G1613 Tripterygium wilfordii
TWI38G1979 Tripterygium wilfordii
TWI38G2258 Tripterygium wilfordii
unitig_62.g23278 Utricularia gibba
VMungo0540G0931 Vigna mungo
VMungo0647G1570 Vigna mungo
VMungo1215G1625 Vigna mungo
Zm00001eb219890 Zea mays

User provided reference genes

Program Settings