Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p67370 Brassica napus
Aa31LG1G19050 Aethionema arabicum
Actinidia05834 Actinidia chinensis
Actinidia31721 Actinidia chinensis
Ah.15g093150 Amaranthus hybridus
AL1G15490 Arabidopsis lyrata
Aqoxy2G00553 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5S024H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CV6EY6 Arachis hypogaea
AT1G05590 Arabidopsis thaliana
ATR0737G027 Amborella trichopoda
ATR0737G032 Amborella trichopoda
ATR0737G172 Amborella trichopoda
ATR0943G001 Amborella trichopoda
ATR1149G055 Amborella trichopoda
Atru.chr11.2719 Acer truncatum
AUR62009370 Chenopodium quinoa
AUR62023051 Chenopodium quinoa
BcaB04g18267 Brassica carinata
BcaC07g42127 Brassica carinata
BolC8t52696H Brassica oleracea
BraA09t42068Z Brassica rapa
C08p51680 Brassica napus
CAN.G1361.13 Capsicum annuum
CANSAT11G1700 Cannabis sativa
CARHR005090 Cardamine hirsuta
Carub.0001s0492 Capsella rubella
Ca_22830_v3 Cicer arietinum L.
Cc02_g26710 Coffea canephora
Cc02_g26730 Coffea canephora
Cc02_g26740 Coffea canephora
CDE05G3587 Ceratophyllum demersum
Cfa001334 Carpinus fangiana
Cfa005053 Carpinus fangiana
Cfa010693 Carpinus fangiana
Cfa025154 Carpinus fangiana
Ciclev10019509m.g Citrus clementina
Ciclev10024601m.g Citrus clementina
Ciclev10033772m.g Citrus clementina
CiPaw.14G094400 Carya illinoinensis
ClCG10G012760 Citrullus lanatus
COL.COLO4_36049 Corchorus olitorius
COL.COLO4_38208 Corchorus olitorius
Cpa.g.sc197.26 Carica papaya
CsaV3_3G032600 Cucumis sativus L.
CSS0017501 Camellia sinensis var. sinensis
CSS0028219 Camellia sinensis var. sinensis
CSS0049864 Camellia sinensis var. sinensis
DCAR_015723 Daucus carota
DCAR_029577 Daucus carota
Dinv43509 Davidia involucrata
Dinv43950 Davidia involucrata
Duzib106G1030 Durio zibethinus
Duzib177G1010 Durio zibethinus
ECA234G1558 Erigeron canadensis
EL10Ac2g04422 Beta vulgaris
Eucgr.K02798 Eucalyptus grandis
Eucgr.K02799 Eucalyptus grandis
FAN04G0538 Fragaria x ananassa
FAN08G0235 Fragaria x ananassa
FAN18G1426 Fragaria x ananassa
FvH4_5g39620 Fragaria vesca
Glyma.08G159500 Glycine max
Glyma.08G161900 Glycine max
Gohir.A11G237200 Gossypium hirsutum
Gorai.007G264000 Gossypium raimondii
GSVIVG01006000001 Vitis vinifera
HanXRQChr11g0330961 Helianthus annuus
HanXRQChr17g0564161 Helianthus annuus
Haze_03282 Corylus avellana
Hma1.2p1_0128F.1_g059950 Hydrangea macrophylla
Hma1.2p1_0462F.1_g157970 Hydrangea macrophylla
HPP92_012518 Vanilla planifolia
HPP92_024828 Vanilla planifolia
HPP92_026632 Vanilla planifolia
Lalb_Chr01g0015731 Lupinus albus
Lalb_Chr20g0108241 Lupinus albus
Lj3g0011591 Lotus japonicus
Lj9A618T88 Lonicera japonica
Lsat_1_v5_gn_4_42140 Lactuca sativa
Manes.09G118700 Manihot esculenta
Manes.10G153600 Manihot esculenta
Mapoly0130s0025 Marchantia polymorpha
MBI01_g29963_MAGBIO Magnolia biondii
MBI01_g43714_MAGBIO Magnolia biondii
MBI01_g43715_MAGBIO Magnolia biondii
MBI01_g43716_MAGBIO Magnolia biondii
MBI04_g09717_MAGBIO Magnolia biondii
Medtr2g062560 Medicago truncatula
MELO3C026977.2 Cucumis melo
Migut.B01413 Erythranthe guttata
Migut.N01651 Erythranthe guttata
MSTRG.4994 Avicennia marina
Nitab4.5_0000468g0240 Nicotiana tabacum
Nitab4.5_0007494g0020 Nicotiana tabacum
Nn2g15837 Nelumbo nucifera
Oeu020242.1 Olea europaea
Oeu024944.1 Olea europaea
Oeu034888.1 Olea europaea
Oeu034889.1 Olea europaea
Oeu045632.1 Olea europaea
Os03g0219400 Oryza sativa ssp. japonica
Os07g0575500 Oryza sativa ssp. japonica
Peaxi162Scf00402g00936 Petunia axillaris
PGR044G1690 Punica granatum
PGSC0003DMG400031128 Solanum tuberosum
Phvul.005G043200 Phaseolus vulgaris
Phvul.005G045300 Phaseolus vulgaris
Potri.001G232600 Populus trichocarpa
Potri.001G232800 Populus trichocarpa
Pp3c18_15890 Physcomitrium patens
Prupe.2G001000 Prunus persica
Psat1g130120 Pisum sativum
PSO384G3492 Papaver somniferum
QL01p001215 Quercus lobata
QL04p000610 Quercus lobata
QL04p002100 Quercus lobata
QL04p002107 Quercus lobata
QL04p002203 Quercus lobata
QL05p001341 Quercus lobata
RcHm_v2.0_Chr7g0241931 Rosa chinensis
Rhsim07G0048800 Rhododendron simsii
Sabra16G0139300 Salix brachista
SalBow4G1289 Salvia bowleyana
SalBow5G2665 Salvia bowleyana
Sc11g0009330 Simmondsia chinensis
Sed0012300 Sechium edule
SEGI_11659 Sequoiadendron giganteum
SEGI_18608 Sequoiadendron giganteum
SEGI_19074 Sequoiadendron giganteum
SEGI_32337 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28760 Striga asiatica
SMO134G0264 Selaginella moellendorffii
Solyc01g081610.3 Solanum lycopersicum
Sopen01g033160 Solanum pennellii
Sp1g04440 Schrenkiella parvula
TAR633G2464 Trochodendron aralioides
TAR636G1355 Trochodendron aralioides
THA.LOC104826178 Tarenaya hassleriana
Thecc.05G252600 Theobroma cacao
Thhalv10007179m.g Eutrema salsugineum
TPR.G17320 Trifolium pratense
TWI09G0458 Tripterygium wilfordii
unitig_578.g16703 Utricularia gibba
vmacro22472 Vaccinium macrocarpon
VMungo1080G0519 Vigna mungo
VMungo1080G1153 Vigna mungo
Zm00001eb008880 Zea mays
Zm00001eb325280 Zea mays

User provided reference genes

Program Settings