Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p27330 Brassica napus
Aa31LG8G7990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis
Actinidia21742 Actinidia chinensis
Actinidia21743 Actinidia chinensis
Actinidia32134 Actinidia chinensis
Actinidia32135 Actinidia chinensis
Ah.01g016900 Amaranthus hybridus
AL3G35330 Arabidopsis lyrata
Aqoxy7G00060 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea
AT3G21290 Arabidopsis thaliana
ATR0730G184 Amborella trichopoda
Atru.chr1.3636 Acer truncatum
AUR62023919 Chenopodium quinoa
AUR62038325 Chenopodium quinoa
BcaB06g26218 Brassica carinata
BcaC05g28184 Brassica carinata
BcaC09g49066 Brassica carinata
BolC1t04238H Brassica oleracea
BolC1t04239H Brassica oleracea
BolC1t04240H Brassica oleracea
BolC5t32952H Brassica oleracea
BraA05t21625Z Brassica rapa
C01p42950 Brassica napus
C01p42960 Brassica napus
C05p42240 Brassica napus
CAN.G1668.10 Capsicum annuum
CANSAT56G3316 Cannabis sativa
CARHR097190 Cardamine hirsuta
Carub.0003s2130 Capsella rubella
Ca_23296_v3 Cicer arietinum L.
Ca_23298_v3 Cicer arietinum L.
Ca_23299_v3 Cicer arietinum L.
CBR_g20995 Chara braunii
CBR_g20996 Chara braunii
Cc04_g02180 Coffea canephora
CDE10G0270 Ceratophyllum demersum
CDE10G0326 Ceratophyllum demersum
CDE10G0876 Ceratophyllum demersum
Cfa003605 Carpinus fangiana
Ciclev10024729m.g Citrus clementina
CiPaw.02G142000 Carya illinoinensis
ClCG07G013620 Citrullus lanatus
COL.COLO4_30609 Corchorus olitorius
Cpa.g.sc131.32 Carica papaya
Cpa.g.sc131.35 Carica papaya
CsaV3_3G044010 Cucumis sativus L.
CSS0001379 Camellia sinensis var. sinensis
DCAR_007608 Daucus carota
DCAR_026375 Daucus carota
Dinv30397 Davidia involucrata
Dinv37932 Davidia involucrata
Duzib160G0801 Durio zibethinus
Duzib192G0218 Durio zibethinus
Duzib235G0635 Durio zibethinus
ECA232G1750 Erigeron canadensis
EL10Ac9g21102 Beta vulgaris
Eucgr.J02886 Eucalyptus grandis
FAN02G0586 Fragaria x ananassa
FAN05G2503 Fragaria x ananassa
FAN09G4600 Fragaria x ananassa
FAN14G1946 Fragaria x ananassa
FvH4_6g32970 Fragaria vesca
Glyma.07G012400 Glycine max
Glyma.08G196100 Glycine max
Gohir.A05G133700 Gossypium hirsutum
Gohir.D05G135700 Gossypium hirsutum
Gorai.009G139700 Gossypium raimondii
GSVIVG01016889001 Vitis vinifera
HanXRQChr05g0140141 Helianthus annuus
HanXRQChr09g0276331 Helianthus annuus
Haze_15920 Corylus avellana
Haze_15921 Corylus avellana
HPP92_028291 Vanilla planifolia
HPP92_028292 Vanilla planifolia
HPP92_028293 Vanilla planifolia
Hund07666 Selenicereus undatus
Lalb_Chr04g0263091 Lupinus albus
Lalb_Chr14g0372871 Lupinus albus
Lalb_Chr14g0372881 Lupinus albus
Lalb_Chr15g0087461 Lupinus albus
Lalb_Chr15g0087471 Lupinus albus
Lj3g0006882 Lotus japonicus
Lj3g0020048 Lotus japonicus
Lj5C49T6 Lonicera japonica
Lsat_1_v5_gn_4_95940 Lactuca sativa
Lsat_1_v5_gn_6_9320 Lactuca sativa
Manes.04G137600 Manihot esculenta
Manes.11G028800 Manihot esculenta
Mapoly0021s0057 Marchantia polymorpha
MBI01_g37799_MAGBIO Magnolia biondii
MD09G1196000 Malus domestica
MD17G1176700 Malus domestica
Medtr1g021875 Medicago truncatula
Medtr4g027360 Medicago truncatula
Medtr8g015610 Medicago truncatula
Medtr8g015620 Medicago truncatula
MELO3C013040.2 Cucumis melo
Migut.I01002 Erythranthe guttata
MSTRG.22604 Avicennia marina
Nitab4.5_0004848g0010 Nicotiana tabacum
Nn1g08771 Nelumbo nucifera
Nn4g26713 Nelumbo nucifera
Oeu026736.3 Olea europaea
Oeu052809.1 Olea europaea
Os03g0187100 Oryza sativa ssp. japonica
Peaxi162Scf00038g01322 Petunia axillaris
PGR102G0505 Punica granatum
PGSC0003DMG400002508 Solanum tuberosum
Phvul.010G141800 Phaseolus vulgaris
Potri.003G033100 Populus trichocarpa
Pp3c12_1570 Physcomitrium patens
Prupe.3G052500 Prunus persica
Psat4g193760 Pisum sativum
PSO170G6909 Papaver somniferum
QL05p015844 Quercus lobata
RcHm_v2.0_Chr2g0142521 Rosa chinensis
Rhsim08G0231600 Rhododendron simsii
Sabra03G0019000 Salix brachista
Sc12g0009860 Simmondsia chinensis
Sed0014548 Sechium edule
Sed0023831 Sechium edule
SEGI_05846 Sequoiadendron giganteum
SEGI_07021 Sequoiadendron giganteum
SGA_v2.0_scaffold45G16992 Striga asiatica
SGA_v2.0_scaffold71G23747 Striga asiatica
SHI11163 Sapria himalayana
SHI11166 Sapria himalayana
SHI11167 Sapria himalayana
SHI11172 Sapria himalayana
SMO334G0114 Selaginella moellendorffii
Solyc03g121380.3 Solanum lycopersicum
Sopen03g040190 Solanum pennellii
Sp3g19330 Schrenkiella parvula
TAR629G3185 Trochodendron aralioides
THA.LOC104810560 Tarenaya hassleriana
THA.LOC104817934 Tarenaya hassleriana
Thecc.06G108000 Theobroma cacao
Thhalv10019924m.g Eutrema salsugineum
TPR.G8763 Trifolium pratense
TWI31G1049 Tripterygium wilfordii
unitig_749.g14048 Utricularia gibba
unitig_749.g14049 Utricularia gibba
vmacro18819 Vaccinium macrocarpon
VMungo0331G0639 Vigna mungo
Zm00001eb006560 Zea mays
Zm00001eb401540 Zea mays

User provided reference genes

Program Settings