Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p37900 Brassica napus
A05p33300 Brassica napus
Aa31LG8G3340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.193 Anthoceros agrestis
Actinidia21693 Actinidia chinensis
Actinidia32715 Actinidia chinensis
Ah.01g021760 Amaranthus hybridus
AL3G28890 Arabidopsis lyrata
Aqoxy7G01528 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0TRA3C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I8Y04W Arachis hypogaea
AT3G16200 Arabidopsis thaliana
ATR0315G163 Amborella trichopoda
Atru.BG.177.p Acer truncatum
Atru.chr1.3422 Acer truncatum
AUR62016515 Chenopodium quinoa
AUR62031868 Chenopodium quinoa
BcaC09g48589 Brassica carinata
BolC1t04776H Brassica oleracea
BolC5t33780H Brassica oleracea
BraA01t03850Z Brassica rapa
BraA05t22155Z Brassica rapa
C01p48080 Brassica napus
C05p50300 Brassica napus
CANSAT56G3143 Cannabis sativa
CARHR091390 Cardamine hirsuta
Carub.0003s1595 Capsella rubella
Ca_01140_v3 Cicer arietinum L.
Cc04_g02880 Coffea canephora
CDE02G3046 Ceratophyllum demersum
Cfa002107 Carpinus fangiana
Ciclev10025565m.g Citrus clementina
CiPaw.01G234300 Carya illinoinensis
CiPaw.02G147900 Carya illinoinensis
ClCG07G013200 Citrullus lanatus
COL.COLO4_30464 Corchorus olitorius
Cpa.g.sc109.43 Carica papaya
CsaV3_3G023810 Cucumis sativus L.
CSS0028346 Camellia sinensis var. sinensis
CSS0039709 Camellia sinensis var. sinensis
DCAR_023071 Daucus carota
Dinv30468 Davidia involucrata
Dinv38006 Davidia involucrata
Duzib192G0285 Durio zibethinus
Duzib235G0372 Durio zibethinus
ECA247G0440 Erigeron canadensis
EL10Ac9g22049 Beta vulgaris
Eucgr.F03051 Eucalyptus grandis
FAN05G4921 Fragaria x ananassa
FAN09G3354 Fragaria x ananassa
FAN14G5860 Fragaria x ananassa
FvH4_6g31940 Fragaria vesca
Glyma.13G356500 Glycine max
Glyma.15G017600 Glycine max
Gohir.A05G127800 Gossypium hirsutum
Gohir.A10G067300 Gossypium hirsutum
Gohir.D05G132300 Gossypium hirsutum
Gohir.D10G069100 Gossypium hirsutum
Gorai.009G136000 Gossypium raimondii
Gorai.011G073000 Gossypium raimondii
GSVIVG01017045001 Vitis vinifera
HanXRQChr02g0032341 Helianthus annuus
HanXRQChr10g0311001 Helianthus annuus
Haze_11589 Corylus avellana
Haze_16340 Corylus avellana
Hma1.2p1_0033F.1_g020650 Hydrangea macrophylla
Hma1.2p1_1262F.1_g271230 Hydrangea macrophylla
Hma1.2p1_1576F.1_g291660 Hydrangea macrophylla
Hma1.2p1_1617F.1_g293780 Hydrangea macrophylla
HPP92_008141 Vanilla planifolia
HPP92_008142 Vanilla planifolia
HPP92_021671 Vanilla planifolia
Hund06644 Selenicereus undatus
Lalb_Chr14g0373141 Lupinus albus
Lalb_Chr22g0351431 Lupinus albus
Lalb_Chr24g0395991 Lupinus albus
Lj3g0026249 Lotus japonicus
Lsat_1_v5_gn_1_34800 Lactuca sativa
Lsat_1_v5_gn_4_101400 Lactuca sativa
Manes.04G131400 Manihot esculenta
Manes.11G036700 Manihot esculenta
MBI04_g14933_MAGBIO Magnolia biondii
MD09G1207900 Malus domestica
MD17G1189000 Malus domestica
Medtr2g101480 Medicago truncatula
MELO3C012983.2 Cucumis melo
Migut.D01009 Erythranthe guttata
Migut.I00930 Erythranthe guttata
MSTRG.22656 Avicennia marina
MSTRG.9470 Avicennia marina
Nitab4.5_0000351g0010 Nicotiana tabacum
Nitab4.5_0006985g0040 Nicotiana tabacum
Nitab4.5_0009963g0010 Nicotiana tabacum
Nitab4.5_0011578g0010 Nicotiana tabacum
Nn2g11656 Nelumbo nucifera
Nn3g18134 Nelumbo nucifera
Oeu050619.1 Olea europaea
Os01g0496900 Oryza sativa ssp. japonica
Peaxi162Scf00015g00135 Petunia axillaris
Peaxi162Scf00207g01238 Petunia axillaris
PGR102G2014 Punica granatum
PGSC0003DMG400002632 Solanum tuberosum
PGSC0003DMG400007734 Solanum tuberosum
Phvul.005G169700 Phaseolus vulgaris
Potri.001G186200 Populus trichocarpa
Potri.003G051200 Populus trichocarpa
Pp3c17_20690 Physcomitrium patens
Prupe.3G064100 Prunus persica
Psat5g297320 Pisum sativum
PSO566G0328 Papaver somniferum
PSO782G2876 Papaver somniferum
QL05p021321 Quercus lobata
QL11p016400 Quercus lobata
RcHm_v2.0_Chr2g0139361 Rosa chinensis
Rhsim08G0225100 Rhododendron simsii
Sabra01G0153900 Salix brachista
Sabra03G0027900 Salix brachista
SalBow2G2497 Salvia bowleyana
SalBow7G2677 Salvia bowleyana
Sc12g0009530 Simmondsia chinensis
Sc12g0009700 Simmondsia chinensis
Sed0009248 Sechium edule
Sed0024237 Sechium edule
SEGI_20570 Sequoiadendron giganteum
SEGI_33813 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02014 Striga asiatica
SGA_v2.0_scaffold5G02541 Striga asiatica
SGA_v2.0_scaffold69G23355 Striga asiatica
SHI25904 Sapria himalayana
SMO077G0005 Selaginella moellendorffii
SMO114G0076 Selaginella moellendorffii
SMO147G0400 Selaginella moellendorffii
SMO358G0106 Selaginella moellendorffii
Solyc03g120490.3 Solanum lycopersicum
Solyc07g014600.2 Solanum lycopersicum
Sopen03g039370 Solanum pennellii
Sp3g14570 Schrenkiella parvula
TAR383G0102 Trochodendron aralioides
THA.LOC104815523 Tarenaya hassleriana
THA.LOC104817975 Tarenaya hassleriana
Thecc.06G095100 Theobroma cacao
Thhalv10020703m.g Eutrema salsugineum
TPR.G37217 Trifolium pratense
TWI12G0154 Tripterygium wilfordii
TWI75G1313 Tripterygium wilfordii
TWI75G1773 Tripterygium wilfordii
unitig_899.g14773 Utricularia gibba
vmacro18875 Vaccinium macrocarpon
VMungo1080G0622 Vigna mungo
Zm00001eb270670 Zea mays

User provided reference genes

Program Settings