Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p24330 Brassica napus
A09p24340 Brassica napus
Aa31LG2G7220 Aethionema arabicum
Actinidia04866 Actinidia chinensis
Ah.02g113780 Amaranthus hybridus
AL5G13000 Arabidopsis lyrata
Aqoxy3G03491 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3IH7MW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7B8RN4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G0M71R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G7V7VG Arachis hypogaea
AT2G03310 Arabidopsis thaliana
ATR0730G100 Amborella trichopoda
Atru.chr11.1719 Acer truncatum
BcaB07g30675 Brassica carinata
BcaC04g21493 Brassica carinata
BolC9t55974H Brassica oleracea
BraA09t38028Z Brassica rapa
C09p31170 Brassica napus
CAN.G479.59 Capsicum annuum
CANSAT54G2635 Cannabis sativa
CANSAT80G1936 Cannabis sativa
CARHR145660 Cardamine hirsuta
Carub.0005s0227 Capsella rubella
Ca_23884_v3 Cicer arietinum L.
Cc00_g25850 Coffea canephora
Cc11_g12580 Coffea canephora
Cfa019277 Carpinus fangiana
Ciclev10022335m.g Citrus clementina
Ciclev10032785m.g Citrus clementina
CiPaw.06G088700 Carya illinoinensis
ClCG04G012080 Citrullus lanatus
ClCG09G021960 Citrullus lanatus
COL.COLO4_27972 Corchorus olitorius
COL.COLO4_36949 Corchorus olitorius
Cpa.g.c38098 Carica papaya
Cpa.g.sc13.297 Carica papaya
CsaV3_1G005690 Cucumis sativus L.
CsaV3_5G025130 Cucumis sativus L.
CSS0001536 Camellia sinensis var. sinensis
CSS0024821 Camellia sinensis var. sinensis
CSS0039450 Camellia sinensis var. sinensis
DCAR_006605 Daucus carota
DCAR_016580 Daucus carota
DCAR_026037 Daucus carota
Dinv10658 Davidia involucrata
Dinv34096 Davidia involucrata
Dinv38746 Davidia involucrata
Duzib084G1416 Durio zibethinus
Duzib251G0477 Durio zibethinus
ECA246G3383 Erigeron canadensis
Eucgr.A00557 Eucalyptus grandis
Eucgr.B03194 Eucalyptus grandis
FAN08G2699 Fragaria x ananassa
FAN13G2099 Fragaria x ananassa
FAN18G3211 Fragaria x ananassa
FvH4_5g14530 Fragaria vesca
Glyma.05G024700 Glycine max
Glyma.17G102500 Glycine max
Glyma.20G031200 Glycine max
Gohir.A03G102500 Gossypium hirsutum
Gohir.A11G032000 Gossypium hirsutum
Gohir.A12G163200 Gossypium hirsutum
Gohir.A12G179000 Gossypium hirsutum
Gohir.D02G127400 Gossypium hirsutum
Gohir.D11G035400 Gossypium hirsutum
Gohir.D12G166200 Gossypium hirsutum
Gohir.D12G181600 Gossypium hirsutum
Gorai.005G143000 Gossypium raimondii
Gorai.007G038200 Gossypium raimondii
Gorai.008G179000 Gossypium raimondii
Gorai.008G194900 Gossypium raimondii
GSVIVG01007962001 Vitis vinifera
GSVIVG01019947001 Vitis vinifera
HanXRQChr08g0210661 Helianthus annuus
Haze_07652 Corylus avellana
Haze_11958 Corylus avellana
Hund02625 Selenicereus undatus
Hund09825 Selenicereus undatus
Hund25207 Selenicereus undatus
Lalb_Chr09g0329161 Lupinus albus
Lalb_Chr12g0196981 Lupinus albus
Lj4g0010683 Lotus japonicus
Lj4g0019858 Lotus japonicus
Lj9A467T87 Lonicera japonica
Lsat_1_v5_gn_1_14361 Lactuca sativa
Lsat_1_v5_gn_8_49101 Lactuca sativa
Manes.05G106200 Manihot esculenta
MD06G1197700 Malus domestica
MD14G1205100 Malus domestica
Medtr4g082330 Medicago truncatula
Medtr4g108990 Medicago truncatula
MELO3C002000.2 Cucumis melo
MELO3C002975.2 Cucumis melo
Migut.D01759 Erythranthe guttata
Migut.L01243 Erythranthe guttata
MSTRG.11371 Avicennia marina
Nitab4.5_0001211g0150 Nicotiana tabacum
Nitab4.5_0005900g0030 Nicotiana tabacum
Nn3g17332 Nelumbo nucifera
Nn4g23279 Nelumbo nucifera
Oeu047275.1 Olea europaea
Oeu052457.1 Olea europaea
Peaxi162Scf00187g01112 Petunia axillaris
Peaxi162Scf00274g00335 Petunia axillaris
Peaxi162Scf00408g00521 Petunia axillaris
PGR044G0243 Punica granatum
PGR102G2341 Punica granatum
PGSC0003DMG400002821 Solanum tuberosum
PGSC0003DMG400024562 Solanum tuberosum
Phvul.002G169000 Phaseolus vulgaris
Phvul.003G188100 Phaseolus vulgaris
Potri.017G079000 Populus trichocarpa
Prupe.5G198500 Prunus persica
Psat4g049480 Pisum sativum
Psat7g135800 Pisum sativum
QL03p069741 Quercus lobata
QL03p069756 Quercus lobata
QL10p017723 Quercus lobata
RcHm_v2.0_Chr7g0182121 Rosa chinensis
Rhsim08G0152100 Rhododendron simsii
Rhsim12G0078700 Rhododendron simsii
Sabra17G0070100 Salix brachista
SalBow5G3698 Salvia bowleyana
Sc12g0006540 Simmondsia chinensis
Sed0006867 Sechium edule
Sed0012343 Sechium edule
SGA_v2.0_scaffold16G07732 Striga asiatica
SGA_v2.0_scaffold313G48329 Striga asiatica
Solyc03g115730.3 Solanum lycopersicum
Solyc04g005555.1 Solanum lycopersicum
Sopen03g034710 Solanum pennellii
Sopen04g001590 Solanum pennellii
Sp2g14250 Schrenkiella parvula
TAR006G0004 Trochodendron aralioides
TAR622G0621 Trochodendron aralioides
TAR622G1347 Trochodendron aralioides
THA.LOC104805944 Tarenaya hassleriana
Thecc.02G339500 Theobroma cacao
Thecc.03G094300 Theobroma cacao
Thhalv10004995m.g Eutrema salsugineum
Thhalv10005531m.g Eutrema salsugineum
TPR.G2001 Trifolium pratense
TPR.G34048 Trifolium pratense
TWI56G0627 Tripterygium wilfordii
unitig_26.g9652 Utricularia gibba
vmacro01343 Vaccinium macrocarpon
vmacro17570 Vaccinium macrocarpon
VMungo0251G1037 Vigna mungo
VMungo1215G3129 Vigna mungo

User provided reference genes

Program Settings