Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p21090 Brassica napus
A07p18350 Brassica napus
Aa31LG5G8260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2259 Anthoceros agrestis
Actinidia35468 Actinidia chinensis
AL4G22570 Arabidopsis lyrata
Aqoxy2G01124 Aquilegia oxysepala
Aqoxy4G02760 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.Q13MWU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q2H7V9 Arachis hypogaea
AT2G27730 Arabidopsis thaliana
ATR0609G030 Amborella trichopoda
Atru.chr3.3218 Acer truncatum
AUR62009749 Chenopodium quinoa
AUR62036196 Chenopodium quinoa
BcaB02g10110 Brassica carinata
BcaB06g28164 Brassica carinata
BcaC02g08235 Brassica carinata
BcaC02g10898 Brassica carinata
BcaC02g10901 Brassica carinata
BolC4t23886H Brassica oleracea
BolC4t27225H Brassica oleracea
BraA04t17678Z Brassica rapa
BraA07t29551Z Brassica rapa
C04p23930 Brassica napus
C04p56900 Brassica napus
CAN.G1524.5 Capsicum annuum
CANSAT54G1198 Cannabis sativa
CARHR120400 Cardamine hirsuta
Carub.0004s0847 Capsella rubella
Ca_19413_v3 Cicer arietinum L.
CBR_g38024 Chara braunii
Cc01_g09040 Coffea canephora
CDE04G1608 Ceratophyllum demersum
Cfa010007 Carpinus fangiana
Ciclev10029605m.g Citrus clementina
CiPaw.14G099500 Carya illinoinensis
ClCG01G011970 Citrullus lanatus
Cpa.g.sc32.36 Carica papaya
Cpa.g.sc32.38 Carica papaya
CsaV3_1G014900 Cucumis sativus L.
CSS0038235 Camellia sinensis var. sinensis
DCAR_010342 Daucus carota
DCAR_030570 Daucus carota
Dinv22836 Davidia involucrata
Dinv42546 Davidia involucrata
Duzib168G1921 Durio zibethinus
Duzib170G0221 Durio zibethinus
ECA233G4139 Erigeron canadensis
ECA238G4733 Erigeron canadensis
EL10Ac7g15830 Beta vulgaris
Eucgr.B03844 Eucalyptus grandis
FAN04G2654 Fragaria x ananassa
FAN11G2484 Fragaria x ananassa
FAN13G2036 Fragaria x ananassa
FAN21G3762 Fragaria x ananassa
FAN25G2937 Fragaria x ananassa
FvH4_3g25100 Fragaria vesca
FvH4_5g26820 Fragaria vesca
Glyma.11G182300 Glycine max
Glyma.12G090500 Glycine max
Gohir.A05G080000 Gossypium hirsutum
Gohir.A08G005600 Gossypium hirsutum
Gohir.A09G096200 Gossypium hirsutum
Gohir.D05G082900 Gossypium hirsutum
Gohir.D08G015900 Gossypium hirsutum
Gohir.D09G095900 Gossypium hirsutum
Gorai.004G010200 Gossypium raimondii
Gorai.006G112600 Gossypium raimondii
Gorai.009G084700 Gossypium raimondii
GSVIVG01036114001 Vitis vinifera
HanXRQChr11g0324151 Helianthus annuus
HanXRQChr13g0397481 Helianthus annuus
Hma1.2p1_0413F.1_g147325 Hydrangea macrophylla
Hma1.2p1_0587F.1_g184260 Hydrangea macrophylla
Hma1.2p1_0587F.1_g184270 Hydrangea macrophylla
Hma1.2p1_3516F.1_g336514 Hydrangea macrophylla
HPP92_003218 Vanilla planifolia
HPP92_003219 Vanilla planifolia
Hund18761 Selenicereus undatus
Lalb_Chr01g0004881 Lupinus albus
Lalb_Chr03g0028151 Lupinus albus
Lj3g0027260 Lotus japonicus
Lsat_1_v5_gn_2_59421 Lactuca sativa
Lsat_1_v5_gn_6_38900 Lactuca sativa
Manes.04G003100 Manihot esculenta
Mapoly0044s0081 Marchantia polymorpha
MBI05_g05303_MAGBIO Magnolia biondii
MD03G1147400 Malus domestica
MD11G1166100 Malus domestica
Medtr4g052910 Medicago truncatula
MELO3C004698.2 Cucumis melo
Migut.N02487 Erythranthe guttata
MSTRG.12371 Avicennia marina
MSTRG.17705 Avicennia marina
Nitab4.5_0000227g0280 Nicotiana tabacum
Nitab4.5_0000755g0070 Nicotiana tabacum
Nitab4.5_0002914g0100 Nicotiana tabacum
Nitab4.5_0012586g0010 Nicotiana tabacum
Nn2g14177 Nelumbo nucifera
Nn6g34871 Nelumbo nucifera
Oeu031471.1 Olea europaea
Oeu035567.1 Olea europaea
Os08g0559000 Oryza sativa ssp. japonica
Os09g0568900 Oryza sativa ssp. japonica
Peaxi162Scf00040g00023 Petunia axillaris
Peaxi162Scf00757g00422 Petunia axillaris
PGR102G3359 Punica granatum
PGSC0003DMG400026356 Solanum tuberosum
Phvul.011G095100 Phaseolus vulgaris
Potri.004G201700 Populus trichocarpa
Potri.009G163100 Populus trichocarpa
Pp3c14_2790 Physcomitrium patens
Pp3c1_22500 Physcomitrium patens
Prupe.6G131900 Prunus persica
Psat7g187720 Pisum sativum
PSO339G2388 Papaver somniferum
PSO339G6001 Papaver somniferum
PSO384G4162 Papaver somniferum
PSO801G0293 Papaver somniferum
QL01p012137 Quercus lobata
RcHm_v2.0_Chr5g0045641 Rosa chinensis
RcHm_v2.0_Chr5g0046361 Rosa chinensis
Rhsim13G0112500 Rhododendron simsii
Sabra04G0136300 Salix brachista
Sabra09G0127300 Salix brachista
SalBow3G2207 Salvia bowleyana
Sc06g0008770 Simmondsia chinensis
Sed0020870 Sechium edule
SEGI_07969 Sequoiadendron giganteum
SGA_v2.0_scaffold177G39414 Striga asiatica
SGA_v2.0_scaffold295G47520 Striga asiatica
Solyc11g068510.2 Solanum lycopersicum
Sopen11g027220 Solanum pennellii
Sp4g10520 Schrenkiella parvula
TAR633G0561 Trochodendron aralioides
TAR636G0935 Trochodendron aralioides
THA.LOC104800543 Tarenaya hassleriana
Thecc.09G281300 Theobroma cacao
Thhalv10017451m.g Eutrema salsugineum
TPR.G17236 Trifolium pratense
TWI31G0143 Tripterygium wilfordii
unitig_27.g25034 Utricularia gibba
vmacro03322 Vaccinium macrocarpon
vmacro14353 Vaccinium macrocarpon
VMungo1127G1656 Vigna mungo
Zm00001eb151060 Zea mays
Zm00001eb343400 Zea mays
Zm00001eb369670 Zea mays
Zm00001eb416000 Zea mays

User provided reference genes

Program Settings