Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p10100 Brassica napus
A09p36530 Brassica napus
Aa31LG6G5670 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis
Actinidia07691 Actinidia chinensis
Actinidia39569 Actinidia chinensis
AL1G43880 Arabidopsis lyrata
Aqoxy3G00593 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea
AT1G29990 Arabidopsis thaliana
ATR0743G157 Amborella trichopoda
Atru.chr10.1243 Acer truncatum
AUR62030207 Chenopodium quinoa
AUR62039776 Chenopodium quinoa
BcaB03g13847 Brassica carinata
BcaB07g32600 Brassica carinata
BcaC05g27010 Brassica carinata
BcaC06g35482 Brassica carinata
BolC5t31593H Brassica oleracea
BolC7t42045H Brassica oleracea
BraA07t28803Z Brassica rapa
BraA09t39174Z Brassica rapa
C05p28750 Brassica napus
C07p15580 Brassica napus
CAN.G134.136 Capsicum annuum
CAN.G134.137 Capsicum annuum
CAN.G3523.1 Capsicum annuum
CANSAT35G1260 Cannabis sativa
CARHR029400 Cardamine hirsuta
Carub.0001s2824 Capsella rubella
CBR_g48714 Chara braunii
Cc02_g37190 Coffea canephora
CDE02G0055 Ceratophyllum demersum
CDE02G2003 Ceratophyllum demersum
CDE09G0791 Ceratophyllum demersum
Cfa000953 Carpinus fangiana
Cfa022129 Carpinus fangiana
Ciclev10017164m.g Citrus clementina
CiPaw.09G124400 Carya illinoinensis
CiPaw.10G092400 Carya illinoinensis
ClCG03G007080 Citrullus lanatus
COL.COLO4_31081 Corchorus olitorius
Cre12.g502750 Chlamydomonas reinhardtii
CsaV3_1G032650 Cucumis sativus L.
CSS0020008 Camellia sinensis var. sinensis
CSS0046404 Camellia sinensis var. sinensis
Dinv30737 Davidia involucrata
Dinv32261 Davidia involucrata
Duzib192G0549 Durio zibethinus
Duzib235G0692 Durio zibethinus
ECA233G0220 Erigeron canadensis
EL10Ac8g19712 Beta vulgaris
Eucgr.E02397 Eucalyptus grandis
FAN11G3072 Fragaria x ananassa
FAN16G0953 Fragaria x ananassa
FAN21G2809 Fragaria x ananassa
FAN25G0101 Fragaria x ananassa
FvH4_3g05660 Fragaria vesca
Glyma.08G046600 Glycine max
Glyma.12G006600 Glycine max
Gohir.A05G148700 Gossypium hirsutum
Gohir.A10G040300 Gossypium hirsutum
Gohir.D01G100600 Gossypium hirsutum
Gohir.D01G149300 Gossypium hirsutum
Gohir.D05G151300 Gossypium hirsutum
Gohir.D10G041200 Gossypium hirsutum
Gorai.002G125400 Gossypium raimondii
Gorai.002G185400 Gossypium raimondii
Gorai.009G155300 Gossypium raimondii
Gorai.011G043400 Gossypium raimondii
GSVIVG01021444001 Vitis vinifera
HanXRQChr01g0020611 Helianthus annuus
HanXRQChr11g0340951 Helianthus annuus
Haze_05586 Corylus avellana
Haze_05599 Corylus avellana
HPP92_006252 Vanilla planifolia
Hund21531 Selenicereus undatus
Lalb_Chr05g0222161 Lupinus albus
Lj4g0009583 Lotus japonicus
Lj5g0010316 Lotus japonicus
Lsat_1_v5_gn_1_91801 Lactuca sativa
Lsat_1_v5_gn_5_30841 Lactuca sativa
Manes.09G021201 Manihot esculenta
Manes.11G058500 Manihot esculenta
Mapoly0006s0079 Marchantia polymorpha
MBI07_g26358_MAGBIO Magnolia biondii
MCO01G210 Micromonas commoda
MD05G1284500 Malus domestica
MD10G1262900 Malus domestica
Medtr3g462870 Medicago truncatula
Medtr5g055650 Medicago truncatula
MELO3C002717.2 Cucumis melo
Migut.M00914 Erythranthe guttata
MSTRG.16239 Avicennia marina
MSTRG.7483 Avicennia marina
Nitab4.5_0000348g0240 Nicotiana tabacum
Nitab4.5_0010327g0020 Nicotiana tabacum
Nn4g24866 Nelumbo nucifera
Oeu034156.1 Olea europaea
Oeu052376.1 Olea europaea
Os02g0246300 Oryza sativa ssp. japonica
Peaxi162Scf01211g00142 Petunia axillaris
PGR042G1500 Punica granatum
PGSC0003DMG400009647 Solanum tuberosum
Phvul.002G321900 Phaseolus vulgaris
Phvul.009G128800 Phaseolus vulgaris
Potri.004G131900 Populus trichocarpa
Pp3c22_1770 Physcomitrium patens
PRCOL_00000028 Prasinoderma coloniale
Prupe.3G104900 Prunus persica
Prupe.4G079900 Prunus persica
Psat2g084800 Pisum sativum
PSO339G4484 Papaver somniferum
PSO384G3576 Papaver somniferum
QL05p058391 Quercus lobata
QL06p022817 Quercus lobata
RcHm_v2.0_Chr5g0013981 Rosa chinensis
Rhsim13G0211800 Rhododendron simsii
Sabra04G0085700 Salix brachista
SalBow8G3614 Salvia bowleyana
Sc17g0004940 Simmondsia chinensis
Sed0005528 Sechium edule
Sed0006544 Sechium edule
SEGI_19850 Sequoiadendron giganteum
SEGI_33388 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00167 Striga asiatica
SGA_v2.0_scaffold333G48998 Striga asiatica
SMO367G0874 Selaginella moellendorffii
Solyc08g016420.3 Solanum lycopersicum
Sopen08g006800 Solanum pennellii
Sp1g25870 Schrenkiella parvula
TAR626G0896 Trochodendron aralioides
THA.LOC104812669 Tarenaya hassleriana
THA.LOC104814295 Tarenaya hassleriana
Thecc.06G151500 Theobroma cacao
Thhalv10009093m.g Eutrema salsugineum
TPR.G13287 Trifolium pratense
TWI38G0351 Tripterygium wilfordii
TWI38G1166 Tripterygium wilfordii
unitig_32.g11442 Utricularia gibba
vmacro04021 Vaccinium macrocarpon
VMungo0251G3606 Vigna mungo
Zm00001eb139040 Zea mays
Zm00001eb225310 Zea mays
Zm00001eb238610 Zea mays
Zm00001eb258640 Zea mays
Zm00001eb269380 Zea mays

User provided reference genes

Program Settings