Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p47210 Brassica napus
A09p21080 Brassica napus
Aa31LG1G4780 Aethionema arabicum
Aa31LG1G4790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.245 Anthoceros agrestis
Ah.10g037790 Amaranthus hybridus
AL1G20660 Arabidopsis lyrata
AL1G20790 Arabidopsis lyrata
AL1G47560 Arabidopsis lyrata
AL1G47570 Arabidopsis lyrata
Aqoxy4G00649 Aquilegia oxysepala
Aqoxy5G02134 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A28SEL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H9CC2T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J3Q9FM Arachis hypogaea
AT1G10095 Arabidopsis thaliana
ATR0736G161 Amborella trichopoda
Atru.chr2.987 Acer truncatum
AUR62008995 Chenopodium quinoa
AUR62023306 Chenopodium quinoa
BcaB07g30949 Brassica carinata
BcaC04g21837 Brassica carinata
BcaC06g31621 Brassica carinata
BcaC06g34559 Brassica carinata
BolC7t43245H Brassica oleracea
BolC7t43246H Brassica oleracea
BolC9t55571H Brassica oleracea
BolC9t55572H Brassica oleracea
BraA06t27592Z Brassica rapa
BraA09t37709Z Brassica rapa
C07p27180 Brassica napus
C07p27190 Brassica napus
C09p26820 Brassica napus
CAN.G588.60 Capsicum annuum
CANSAT01G0497 Cannabis sativa
CARHR010210 Cardamine hirsuta
CARHR222860 Cardamine hirsuta
Carub.0001s0952 Capsella rubella
Ca_14064_v3 Cicer arietinum L.
CBR_g718 Chara braunii
Cc02_g08800 Coffea canephora
CDE04G0768 Ceratophyllum demersum
CDE04G2937 Ceratophyllum demersum
Cfa006356 Carpinus fangiana
Ciclev10020293m.g Citrus clementina
CiPaw.07G072600 Carya illinoinensis
ClCG11G010620 Citrullus lanatus
COL.COLO4_00075 Corchorus olitorius
Cpa.g.sc162.40 Carica papaya
CsaV3_2G009770 Cucumis sativus L.
CSS0014360 Camellia sinensis var. sinensis
CSS0038343 Camellia sinensis var. sinensis
DCAR_022832 Daucus carota
Dinv00149 Davidia involucrata
Dinv18988 Davidia involucrata
Duzib106G0302 Durio zibethinus
ECA233G3630 Erigeron canadensis
EL10Ac2g04577 Beta vulgaris
Eucgr.H04227 Eucalyptus grandis
FAN02G1272 Fragaria x ananassa
FAN05G4025 Fragaria x ananassa
FAN05G4826 Fragaria x ananassa
FAN09G0282 Fragaria x ananassa
FAN14G2205 Fragaria x ananassa
FAN14G5822 Fragaria x ananassa
FvH4_6g01921 Fragaria vesca
Glyma.03G113500 Glycine max
Glyma.07G113400 Glycine max
Gohir.A08G217400 Gossypium hirsutum
Gohir.D08G234400 Gossypium hirsutum
Gorai.004G249200 Gossypium raimondii
GSVIVG01023502001 Vitis vinifera
HanXRQChr07g0204481 Helianthus annuus
Haze_04422 Corylus avellana
Haze_04423 Corylus avellana
Hma1.2p1_1512F.1_g287895 Hydrangea macrophylla
HPP92_003061 Vanilla planifolia
Hund12147 Selenicereus undatus
Hund13719 Selenicereus undatus
Lalb_Chr03g0040321 Lupinus albus
Lj2A43G39 Lonicera japonica
Lj3g0015193 Lotus japonicus
Lsat_1_v5_gn_6_39820 Lactuca sativa
Lsat_1_v5_gn_8_24860 Lactuca sativa
Manes.08G139500 Manihot esculenta
Mapoly0082s0051 Marchantia polymorpha
MBI07_g16903_MAGBIO Magnolia biondii
MCO01G175 Micromonas commoda
MD04G1230400 Malus domestica
MD12G1248000 Malus domestica
MD12G1248100 Malus domestica
MD12G1248600 Malus domestica
MD12G1248900 Malus domestica
Medtr8g006785 Medicago truncatula
MELO3C008708.2 Cucumis melo
Migut.F00800 Erythranthe guttata
MSTRG.14348 Avicennia marina
Nitab4.5_0005396g0030 Nicotiana tabacum
Nitab4.5_0013387g0040 Nicotiana tabacum
Nn4g26424 Nelumbo nucifera
Oeu012237.1 Olea europaea
Oeu016533.1 Olea europaea
Os01g0684800 Oryza sativa ssp. japonica
Peaxi162Scf00407g00626 Petunia axillaris
PGSC0003DMG401006195 Solanum tuberosum
Phvul.010G051000 Phaseolus vulgaris
Potri.013G047100 Populus trichocarpa
Pp3c11_21460 Physcomitrium patens
Pp3c7_7610 Physcomitrium patens
Prupe.6G350300 Prunus persica
Psat4g225120 Pisum sativum
PSO210G0659 Papaver somniferum
PSO210G1919 Papaver somniferum
QL03p029942 Quercus lobata
QL03p029974 Quercus lobata
QL03p030145 Quercus lobata
QL03p030280 Quercus lobata
QL03p030283 Quercus lobata
QL03p030368 Quercus lobata
QL03p030376 Quercus lobata
QL03p030425 Quercus lobata
RcHm_v2.0_Chr2g0095691 Rosa chinensis
RcHm_v2.0_Chr3g0449661 Rosa chinensis
Rhsim09G0136900 Rhododendron simsii
Sabra13G0043100 Salix brachista
SalBow6G5984 Salvia bowleyana
Sc10g0001190 Simmondsia chinensis
Sed0000191 Sechium edule
SEGI_14565 Sequoiadendron giganteum
SEGI_33500 Sequoiadendron giganteum
SGA_v2.0_scaffold177G39428 Striga asiatica
SGA_v2.0_scaffold26G11247 Striga asiatica
SGA_v2.0_scaffold26G11248 Striga asiatica
SGA_v2.0_scaffold295G47511 Striga asiatica
SMO146G0189 Selaginella moellendorffii
Solyc01g111410.3 Solanum lycopersicum
Sopen01g053470 Solanum pennellii
Sp2g09220 Schrenkiella parvula
TAR362G0358 Trochodendron aralioides
Thecc.05G270700 Theobroma cacao
Thhalv10000880m.g Eutrema salsugineum
TPR.G15846 Trifolium pratense
TPR.G17496 Trifolium pratense
TPR.G19618 Trifolium pratense
TPR.G33137 Trifolium pratense
unitig_46.g18500 Utricularia gibba
unitig_47.g30763 Utricularia gibba
vmacro10367 Vaccinium macrocarpon
VMungo0331G1958 Vigna mungo
Zm00001eb229480 Zea mays

User provided reference genes

Program Settings