Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30240 Brassica napus
A03p66910 Brassica napus
A09p16770 Brassica napus
Aa31LG5G18150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.220 Anthoceros agrestis
Actinidia18816 Actinidia chinensis
Ah.00g000900 Amaranthus hybridus
Ah.11g041380 Amaranthus hybridus
AL2G14790 Arabidopsis lyrata
Aqoxy4G02271 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.66SDN0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.86F2TK Arachis hypogaea
AT1G61520 Arabidopsis thaliana
ATR0751G072 Amborella trichopoda
Atru.chr7.2486 Acer truncatum
AUR62036844 Chenopodium quinoa
AUR62040811 Chenopodium quinoa
BcaB04g20336 Brassica carinata
BcaB07g31277 Brassica carinata
BcaC02g10573 Brassica carinata
BcaC04g22329 Brassica carinata
BcaC06g31846 Brassica carinata
BolC1t03805H Brassica oleracea
BolC4t24267H Brassica oleracea
BolC9t54959H Brassica oleracea
BraA01t02788Z Brassica rapa
BraA01t03159Z Brassica rapa
BraA09t37314Z Brassica rapa
C01p38380 Brassica napus
C04p27340 Brassica napus
C09p20530 Brassica napus
CAN.G904.8 Capsicum annuum
CANSAT54G1187 Cannabis sativa
CARHR050920 Cardamine hirsuta
Carub.0002s0371 Capsella rubella
Ca_06489_v3 Cicer arietinum L.
Cc05_g09930 Coffea canephora
CDE03G0077 Ceratophyllum demersum
CDE06G2288 Ceratophyllum demersum
Cfa008711 Carpinus fangiana
Ciclev10002129m.g Citrus clementina
CiPaw.04G198400 Carya illinoinensis
ClCG03G012070 Citrullus lanatus
COL.COLO4_24668 Corchorus olitorius
Cpa.g.sc8.5 Carica papaya
Cre11.g467573 Chlamydomonas reinhardtii
CsaV3_1G043710 Cucumis sativus L.
CSS0016271 Camellia sinensis var. sinensis
CSS0018005 Camellia sinensis var. sinensis
Dinv26632 Davidia involucrata
Duzib133G0670 Durio zibethinus
Duzib138G0424 Durio zibethinus
ECA236G4519 Erigeron canadensis
ECA240G4804 Erigeron canadensis
EL10Ac1g01941 Beta vulgaris
Eucgr.K01362 Eucalyptus grandis
FAN02G1550 Fragaria x ananassa
FAN05G0079 Fragaria x ananassa
FAN09G0576 Fragaria x ananassa
FAN14G2474 Fragaria x ananassa
FvH4_6g40150 Fragaria vesca
Glyma.02G309500 Glycine max
Glyma.14G003400 Glycine max
Gohir.A04G060200 Gossypium hirsutum
Gohir.A11G146500 Gossypium hirsutum
Gohir.D11G152600 Gossypium hirsutum
Gorai.007G163200 Gossypium raimondii
GSVIVG01019377001 Vitis vinifera
HanXRQChr11g0329811 Helianthus annuus
HanXRQChr15g0492411 Helianthus annuus
Haze_12562 Corylus avellana
HPP92_007488 Vanilla planifolia
Hund01775 Selenicereus undatus
Lalb_Chr17g0349341 Lupinus albus
Lj1g0028151 Lotus japonicus
Lj1P804T32 Lonicera japonica
Lsat_1_v5_gn_7_99221 Lactuca sativa
Lsat_1_v5_gn_9_103341 Lactuca sativa
Manes.13G058600 Manihot esculenta
Mapoly0066s0050 Marchantia polymorpha
MBI14_g10249_MAGBIO Magnolia biondii
MBI14_g12741_MAGBIO Magnolia biondii
MBI15_g35997_MAGBIO Magnolia biondii
MCO09G630 Micromonas commoda
MD09G1134800 Malus domestica
MD17G1123800 Malus domestica
Medtr5g098770 Medicago truncatula
Medtr5g098780 Medicago truncatula
Medtr5g098785 Medicago truncatula
MELO3C015076.2 Cucumis melo
Migut.H02086 Erythranthe guttata
MSTRG.15022 Avicennia marina
Nitab4.5_0000505g0080 Nicotiana tabacum
Nitab4.5_0000639g0230 Nicotiana tabacum
Nitab4.5_0000923g0200 Nicotiana tabacum
Nitab4.5_0002209g0120 Nicotiana tabacum
Nn1g07621 Nelumbo nucifera
Oeu001314.2 Olea europaea
Oeu020032.1 Olea europaea
Os02g0197600 Oryza sativa ssp. japonica
Peaxi162Scf00000g00601 Petunia axillaris
Peaxi162Scf00035g02214 Petunia axillaris
Peaxi162Scf00111g00521 Petunia axillaris
PGR044G1423 Punica granatum
PGSC0003DMG400007787 Solanum tuberosum
PGSC0003DMG400021287 Solanum tuberosum
Phvul.008G289700 Phaseolus vulgaris
Potri.014G172400 Populus trichocarpa
Pp3c16_16040 Physcomitrium patens
Pp3c27_7010 Physcomitrium patens
Pp3c27_7020 Physcomitrium patens
Pp3c6_22090 Physcomitrium patens
PRCOL_00003242 Prasinoderma coloniale
Prupe.3G191900 Prunus persica
Psat2g001880 Pisum sativum
PSO063G6234 Papaver somniferum
PSO782G2350 Papaver somniferum
QL04p065502 Quercus lobata
RcHm_v2.0_Chr2g0155141 Rosa chinensis
Rhsim04G0032000 Rhododendron simsii
Sabra14G0132000 Salix brachista
SalBow6G0531 Salvia bowleyana
SalBow8G3705 Salvia bowleyana
Sc15g0007360 Simmondsia chinensis
Sed0000961 Sechium edule
Sed0016983 Sechium edule
SEGI_01576 Sequoiadendron giganteum
SEGI_24757 Sequoiadendron giganteum
SGA_v2.0_scaffold70G23593 Striga asiatica
SMO348G0006 Selaginella moellendorffii
Solyc10g007690.3 Solanum lycopersicum
Solyc12g011280.2 Solanum lycopersicum
Sopen10g003600 Solanum pennellii
Sopen12g006610 Solanum pennellii
Sp2g03060 Schrenkiella parvula
TAR627G0450 Trochodendron aralioides
TAR629G1173 Trochodendron aralioides
THA.LOC104819019 Tarenaya hassleriana
THA.LOC104822450 Tarenaya hassleriana
Thecc.01G203200 Theobroma cacao
Thhalv10023636m.g Eutrema salsugineum
TPR.G22113 Trifolium pratense
TPR.G35887 Trifolium pratense
TWI36G0015 Tripterygium wilfordii
TWI36G0025 Tripterygium wilfordii
unitig_62.g23094 Utricularia gibba
unitig_85.g27398 Utricularia gibba
unitig_85.g27399 Utricularia gibba
vmacro09452 Vaccinium macrocarpon
VMungo0647G2022 Vigna mungo

User provided reference genes

Program Settings