Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p35840 Brassica napus
A09p06310 Brassica napus
Aa31LG11G4300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3173 Anthoceros agrestis
Actinidia14132 Actinidia chinensis
Actinidia23108 Actinidia chinensis
AL6G36710 Arabidopsis lyrata
Aqoxy7G03382 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1BAV2G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CUZL6Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D8NHAG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D9UBCD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HEPM80 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N4WP0Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RJ1WNK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y76JQK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YE5PM3 Arachis hypogaea
AT5G25080 Arabidopsis thaliana
ATR0580G220 Amborella trichopoda
Atru.chr7.2559 Acer truncatum
AUR62024801 Chenopodium quinoa
AUR62032420 Chenopodium quinoa
BcaB04g19808 Brassica carinata
BcaC04g23570 Brassica carinata
BcaNung02298 Brassica carinata
BcaNung03198 Brassica carinata
BcaNung06718 Brassica carinata
BolC7t44804H Brassica oleracea
BolC9t53616H Brassica oleracea
BraA06t26509Z Brassica rapa
BraA09t36276Z Brassica rapa
C07p42740 Brassica napus
C09p07000 Brassica napus
CAN.G333.3 Capsicum annuum
CANSAT25G3039 Cannabis sativa
CANSAT35G0701 Cannabis sativa
CARHR188420 Cardamine hirsuta
Carub.0006s2291 Capsella rubella
Ca_13064_v3 Cicer arietinum L.
Ca_15781_v3 Cicer arietinum L.
CBR_g8579 Chara braunii
Cc08_g07200 Coffea canephora
CDE02G3876 Ceratophyllum demersum
Cfa013047 Carpinus fangiana
Cfa024124 Carpinus fangiana
Ciclev10009140m.g Citrus clementina
CiPaw.08G005800 Carya illinoinensis
ClCG05G016220 Citrullus lanatus
COL.COLO4_18955 Corchorus olitorius
Cpa.g.sc148.17 Carica papaya
CsaV3_4G036490 Cucumis sativus L.
CSS0020729 Camellia sinensis var. sinensis
CSS0021373 Camellia sinensis var. sinensis
CSS0041988 Camellia sinensis var. sinensis
DCAR_022862 Daucus carota
Dinv08182 Davidia involucrata
Dinv13413 Davidia involucrata
Duzib168G1619 Durio zibethinus
ECA240G1139 Erigeron canadensis
EL10Ac2g02494 Beta vulgaris
Eucgr.C02606 Eucalyptus grandis
Eucgr.L02918 Eucalyptus grandis
FAN20G2958 Fragaria x ananassa
FAN27G0477 Fragaria x ananassa
FvH4_2g41170 Fragaria vesca
Glyma.06G061100 Glycine max
Glyma.14G101700 Glycine max
Gohir.A05G060000 Gossypium hirsutum
Gohir.D05G062200 Gossypium hirsutum
Gorai.009G063300 Gossypium raimondii
GSVIVG01035974001 Vitis vinifera
HanXRQChr13g0411011 Helianthus annuus
Haze_21408 Corylus avellana
Hma1.2p1_0389F.1_g142470 Hydrangea macrophylla
HPP92_017174 Vanilla planifolia
Hund02986 Selenicereus undatus
Lalb_Chr11g0063501 Lupinus albus
Lalb_Chr24g0401961 Lupinus albus
Lj1g0022737 Lotus japonicus
Lj5g0013304 Lotus japonicus
Lj7A735T34 Lonicera japonica
Lsat_1_v5_gn_5_49760 Lactuca sativa
Manes.03G008100 Manihot esculenta
Manes.16G130200 Manihot esculenta
Mapoly0130s0032 Marchantia polymorpha
MBI14_g09103_MAGBIO Magnolia biondii
MCO11G643 Micromonas commoda
MD08G1055900 Malus domestica
Medtr1g014130 Medicago truncatula
Medtr3g105925 Medicago truncatula
MELO3C016954.2 Cucumis melo
Migut.A00358 Erythranthe guttata
MSTRG.25830 Avicennia marina
Nitab4.5_0000617g0080 Nicotiana tabacum
Nitab4.5_0010613g0010 Nicotiana tabacum
Nn2g12411 Nelumbo nucifera
Oeu001621.3 Olea europaea
Oeu009650.1 Olea europaea
Oeu042654.1 Olea europaea
Os08g0270200 Oryza sativa ssp. japonica
Peaxi162Scf00006g00249 Petunia axillaris
Peaxi162Scf01038g00137 Petunia axillaris
PGR044G1902 Punica granatum
PGSC0003DMG401028727 Solanum tuberosum
Phvul.001G041300 Phaseolus vulgaris
Phvul.009G086600 Phaseolus vulgaris
Potri.006G264700 Populus trichocarpa
Potri.018G018100 Populus trichocarpa
Pp3c2_14120 Physcomitrium patens
Prupe.1G394400 Prunus persica
Psat5g033480 Pisum sativum
Psat6g026000 Pisum sativum
PSO339G1021 Papaver somniferum
PSO384G2235 Papaver somniferum
QL02p018802 Quercus lobata
RcHm_v2.0_Chr6g0299361 Rosa chinensis
Rhsim07G0165700 Rhododendron simsii
Sabra06G0206800 Salix brachista
Sabra18G0021000 Salix brachista
SalBow4G3208 Salvia bowleyana
Sc09g0010680 Simmondsia chinensis
Sed0002840 Sechium edule
Sed0015580 Sechium edule
SEGI_18119 Sequoiadendron giganteum
SGA_v2.0_scaffold147G36341 Striga asiatica
SHI21074 Sapria himalayana
SMO140G0030 Selaginella moellendorffii
SMO356G0121 Selaginella moellendorffii
Solyc07g008750.4 Solanum lycopersicum
Sopen01g020190 Solanum pennellii
Sopen01g040360 Solanum pennellii
Sopen07g004690 Solanum pennellii
Sopen07g026310 Solanum pennellii
Sopen07g029020 Solanum pennellii
Sp2g22450 Schrenkiella parvula
TAR625G0162 Trochodendron aralioides
TAR625G0311 Trochodendron aralioides
THA.LOC104814986 Tarenaya hassleriana
Thecc.09G015200 Theobroma cacao
Thhalv10004902m.g Eutrema salsugineum
TPR.G1887 Trifolium pratense
TPR.G38911 Trifolium pratense
TWI32G1317 Tripterygium wilfordii
TWI34G0615 Tripterygium wilfordii
unitig_26.g9784 Utricularia gibba
unitig_749.g13819 Utricularia gibba
vmacro05151 Vaccinium macrocarpon
VMungo0647G1387 Vigna mungo
VMungo1309G1055 Vigna mungo
Zm00001eb177850 Zea mays
Zm00001eb353150 Zea mays

User provided reference genes

Program Settings