Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p39650 Brassica napus
Aa31LG7G8930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4445 Anthoceros agrestis
Actinidia14854 Actinidia chinensis
Actinidia16619 Actinidia chinensis
Actinidia38389 Actinidia chinensis
Ah.02g127110 Amaranthus hybridus
Ah.03g137900 Amaranthus hybridus
AL1G39730 Arabidopsis lyrata
Aqoxy3G00400 Aquilegia oxysepala
Aqoxy3G03914 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ALUS4T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TGNB37 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U9BY3Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WS2Q93 Arachis hypogaea
AT1G25570 Arabidopsis thaliana
ATR0681G142 Amborella trichopoda
Atru.chr11.1348 Acer truncatum
Atru.chr11.1359 Acer truncatum
AUR62002920 Chenopodium quinoa
AUR62035280 Chenopodium quinoa
BcaC05g26437 Brassica carinata
BcaC05g26651 Brassica carinata
BolC5t31216H Brassica oleracea
BraA09t39461Z Brassica rapa
C01p06320 Brassica napus
C05p24870 Brassica napus
CAN.G184.93 Capsicum annuum
CANSAT64G2292 Cannabis sativa
CARHR025880 Cardamine hirsuta
Carub.0001s2491 Capsella rubella
Ca_10516_v3 Cicer arietinum L.
Ca_13606_v3 Cicer arietinum L.
Ca_30241_v3 Cicer arietinum L.
CBR_g10928 Chara braunii
Cc11_g10570 Coffea canephora
CDE02G2209 Ceratophyllum demersum
CDE08G0038 Ceratophyllum demersum
Ciclev10030946m.g Citrus clementina
CiPaw.15G003800 Carya illinoinensis
ClCG03G009870 Citrullus lanatus
COL.COLO4_07870 Corchorus olitorius
Cpa.g.sc1.220 Carica papaya
CsaV3_5G022990 Cucumis sativus L.
CSS0017153 Camellia sinensis var. sinensis
CSS0017460 Camellia sinensis var. sinensis
CSS0033687 Camellia sinensis var. sinensis
DCAR_007225 Daucus carota
Dinv16505 Davidia involucrata
Dinv21129 Davidia involucrata
Duzib248G0826 Durio zibethinus
Duzib251G0194 Durio zibethinus
ECA234G2593 Erigeron canadensis
EL10Ac6g14488 Beta vulgaris
EL10Ac6g14490 Beta vulgaris
Eucgr.B03053 Eucalyptus grandis
Eucgr.B03171 Eucalyptus grandis
Eucgr.G02346 Eucalyptus grandis
FAN12G3459 Fragaria x ananassa
FAN17G0871 Fragaria x ananassa
FAN22G1156 Fragaria x ananassa
FvH4_4g28050 Fragaria vesca
Glyma.01G087700 Glycine max
Glyma.02G099800 Glycine max
Glyma.20G186100 Glycine max
Gohir.A03G096900 Gossypium hirsutum
Gohir.D02G116000 Gossypium hirsutum
Gorai.005G138000 Gossypium raimondii
GSVIVG01011948001 Vitis vinifera
HanXRQChr16g0528921 Helianthus annuus
HanXRQChr17g0568041 Helianthus annuus
Haze_17444 Corylus avellana
Hma1.2p1_0862F.1_g229910 Hydrangea macrophylla
HPP92_021957 Vanilla planifolia
Hund05767 Selenicereus undatus
Hund25101 Selenicereus undatus
Lalb_Chr02g0151751 Lupinus albus
Lalb_Chr04g0254911 Lupinus albus
Lalb_Chr17g0341891 Lupinus albus
Lj2g0005913 Lotus japonicus
Lj5g0010874 Lotus japonicus
Lj6A765T26 Lonicera japonica
Lsat_1_v5_gn_4_19700 Lactuca sativa
Manes.06G071800 Manihot esculenta
Manes.14G097900 Manihot esculenta
Mapoly0013s0069 Marchantia polymorpha
MBI09_g36357_MAGBIO Magnolia biondii
MD13G1046200 Malus domestica
MD16G1047800 Malus domestica
Medtr1g093630 Medicago truncatula
Medtr5g053610 Medicago truncatula
MELO3C002999.2 Cucumis melo
Migut.K01267 Erythranthe guttata
Migut.L01095 Erythranthe guttata
MSTRG.2260 Avicennia marina
MSTRG.7685 Avicennia marina
Nitab4.5_0000672g0010 Nicotiana tabacum
Nitab4.5_0006664g0020 Nicotiana tabacum
Nn3g17747 Nelumbo nucifera
Nn4g23736 Nelumbo nucifera
Oeu022115.1 Olea europaea
Oeu042032.1 Olea europaea
Os01g0140400 Oryza sativa ssp. japonica
Peaxi162Scf00179g00014 Petunia axillaris
Peaxi162Scf00380g00315 Petunia axillaris
PGR102G1789 Punica granatum
PGR119G1146 Punica granatum
PGSC0003DMG400000810 Solanum tuberosum
Phvul.003G027500 Phaseolus vulgaris
Phvul.007G102400 Phaseolus vulgaris
Potri.008G117000 Populus trichocarpa
Potri.010G129300 Populus trichocarpa
Pp3c15_3950 Physcomitrium patens
Pp3c9_5240 Physcomitrium patens
Prupe.1G305700 Prunus persica
Psat2g090120 Pisum sativum
Psat6g176440 Pisum sativum
PSO063G6415 Papaver somniferum
PSO782G1617 Papaver somniferum
QL01p045245 Quercus lobata
RcHm_v2.0_Chr4g0435791 Rosa chinensis
RhsimUnG0136800 Rhododendron simsii
Sabra08G0088700 Salix brachista
Sabra10G0098400 Salix brachista
SalBow8G1407 Salvia bowleyana
Sc11g0003090 Simmondsia chinensis
Sed0014528 Sechium edule
SEGI_01977 Sequoiadendron giganteum
SGA_v2.0_scaffold14G06828 Striga asiatica
SGA_v2.0_scaffold213G42220 Striga asiatica
SMO259G0037 Selaginella moellendorffii
Solyc05g009800.4 Solanum lycopersicum
Sopen05g005630 Solanum pennellii
Sp1g22640 Schrenkiella parvula
TAR622G0736 Trochodendron aralioides
Thecc.02G360700 Theobroma cacao
Thhalv10007065m.g Eutrema salsugineum
TPR.G18693 Trifolium pratense
TPR.G22406 Trifolium pratense
TPR.G25947 Trifolium pratense
TPR.G33405 Trifolium pratense
TWI31G0789 Tripterygium wilfordii
TWI79G0857 Tripterygium wilfordii
unitig_26.g10269 Utricularia gibba
unitig_27.g25239 Utricularia gibba
unitig_699.g19514 Utricularia gibba
unitig_699.g19515 Utricularia gibba
vmacro01367 Vaccinium macrocarpon
VMungo0720G2076 Vigna mungo
VMungo1215G2911 Vigna mungo
Zm00001eb124780 Zea mays

User provided reference genes

Program Settings