Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p18490 Brassica napus
A06p01130 Brassica napus
A09p55300 Brassica napus
Aa31sc1038G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2006 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3857 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis
Actinidia35229 Actinidia chinensis
AL1G61600 Arabidopsis lyrata
Aqoxy4G00544 Aquilegia oxysepala
Aqoxy7G02743 Aquilegia oxysepala
Aqoxy7G02744 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea
AT1G53200 Arabidopsis thaliana
ATR0165G025 Amborella trichopoda
Atru.chr2.138 Acer truncatum
Atru.chr2.139 Acer truncatum
Atru.chr2.140 Acer truncatum
AUR62019511 Chenopodium quinoa
AUR62026744 Chenopodium quinoa
AUR62036128 Chenopodium quinoa
BcaB02g10938 Brassica carinata
BcaB07g33349 Brassica carinata
BcaC08g43511 Brassica carinata
BcaC08g44060 Brassica carinata
BolC6t35976H Brassica oleracea
BolC6t36637H Brassica oleracea
BraA05t20741Z Brassica rapa
BraA06t23340Z Brassica rapa
BraA09t38198Z Brassica rapa
C06p08970 Brassica napus
C06p08980 Brassica napus
C06p14590 Brassica napus
CAN.G349.2 Capsicum annuum
CAN.G349.3 Capsicum annuum
CAN.G765.5 Capsicum annuum
CARHR043430 Cardamine hirsuta
Carub.0001s4239 Capsella rubella
Ca_04025_v3 Cicer arietinum L.
Ca_15018_v3 Cicer arietinum L.
CBR_g16861 Chara braunii
Cc05_g11520 Coffea canephora
CDE10G0946 Ceratophyllum demersum
Cfa019615 Carpinus fangiana
Ciclev10019192m.g Citrus clementina
CiPaw.08G115600 Carya illinoinensis
CiPaw.11G165700 Carya illinoinensis
ClCG07G009890 Citrullus lanatus
Cpa.g.sc131.81 Carica papaya
CsaV3_4G008440 Cucumis sativus L.
CSS0012812 Camellia sinensis var. sinensis
CSS0025192 Camellia sinensis var. sinensis
DCAR_021007 Daucus carota
DCAR_031588 Daucus carota
DCAR_032123 Daucus carota
Dinv20222 Davidia involucrata
Duzib268G0207 Durio zibethinus
ECA234G3172 Erigeron canadensis
EL10Ac4g08285 Beta vulgaris
Eucgr.F03287 Eucalyptus grandis
FAN11G0804 Fragaria x ananassa
FAN25G1696 Fragaria x ananassa
FvH4_3g19060 Fragaria vesca
Glyma.12G227600 Glycine max
Glyma.13G009900 Glycine max
Glyma.13G272600 Glycine max
Gohir.A04G036900 Gossypium hirsutum
Gohir.D05G347266 Gossypium hirsutum
Gorai.009G374700 Gossypium raimondii
GSVIVG01014249001 Vitis vinifera
HanXRQChr10g0302381 Helianthus annuus
Haze_09370 Corylus avellana
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla
HPP92_010831 Vanilla planifolia
HPP92_010833 Vanilla planifolia
HPP92_010834 Vanilla planifolia
Hund13862 Selenicereus undatus
Lalb_Chr25g0286141 Lupinus albus
Lj1C835G2 Lonicera japonica
Lj1g0026777 Lotus japonicus
Lj3g0014260 Lotus japonicus
Lsat_1_v5_gn_5_128660 Lactuca sativa
Lsat_1_v5_gn_9_46420 Lactuca sativa
Manes.15G090500 Manihot esculenta
Mapoly0139s0008 Marchantia polymorpha
MBI02_g30879_MAGBIO Magnolia biondii
MBI02_g30880_MAGBIO Magnolia biondii
MD03G1237200 Malus domestica
MD10G1064700 Malus domestica
Medtr2g078390 Medicago truncatula
MELO3C016086.2 Cucumis melo
Migut.H01969 Erythranthe guttata
MSTRG.12883 Avicennia marina
Nitab4.5_0003077g0040 Nicotiana tabacum
Nitab4.5_0007508g0020 Nicotiana tabacum
Nn1g06340 Nelumbo nucifera
Oeu018912.1 Olea europaea
Oeu018948.1 Olea europaea
Oeu024378.1 Olea europaea
Oeu027285.1 Olea europaea
Oeu029262.1 Olea europaea
Oeu038157.2 Olea europaea
Oeu052598.1 Olea europaea
Oeu061325.2 Olea europaea
Oeu061997.2 Olea europaea
Os06g0244100 Oryza sativa ssp. japonica
Peaxi162Scf00000g02614 Petunia axillaris
PGR031G2553 Punica granatum
Phvul.005G067200 Phaseolus vulgaris
Phvul.005G068700 Phaseolus vulgaris
Potri.012G106300 Populus trichocarpa
Pp3c12_9280 Physcomitrium patens
Prupe.4G172200 Prunus persica
Psat5g240000 Pisum sativum
PSO210G0781 Papaver somniferum
PSO832G1805 Papaver somniferum
QL11p026708 Quercus lobata
RcHm_v2.0_Chr5g0031851 Rosa chinensis
RcHm_v2.0_Chr6g0312691 Rosa chinensis
Rhsim04G0023600 Rhododendron simsii
Sabra12G0078800 Salix brachista
SalBow7G4166 Salvia bowleyana
SalBow7G4326 Salvia bowleyana
Sc03g0010280 Simmondsia chinensis
Sed0025158 Sechium edule
SEGI_17777 Sequoiadendron giganteum
SGA_v2.0_scaffold70G23704 Striga asiatica
SHI27676 Sapria himalayana
SHI27677 Sapria himalayana
Solyc12g014090.2 Solanum lycopersicum
Sopen12g005870 Solanum pennellii
Sp1g39780 Schrenkiella parvula
TAR627G0485 Trochodendron aralioides
THA.LOC104798752 Tarenaya hassleriana
Thecc.07G101400 Theobroma cacao
Thecc.07G101600 Theobroma cacao
Thecc.07G102000 Theobroma cacao
Thecc.07G102200 Theobroma cacao
Thecc.07G102300 Theobroma cacao
Thhalv10011326m.g Eutrema salsugineum
Thhalv10028227m.g Eutrema salsugineum
TPR.G29644 Trifolium pratense
TWI31G0686 Tripterygium wilfordii
TWI38G0787 Tripterygium wilfordii
unitig_26.g10042 Utricularia gibba
unitig_26.g10043 Utricularia gibba
vmacro09509 Vaccinium macrocarpon
VMungo0540G0880 Vigna mungo
VMungo1080G1831 Vigna mungo
Zm00001eb280030 Zea mays

User provided reference genes

Program Settings