Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p26920 Brassica napus
Aa31LG8G8410 Aethionema arabicum
Actinidia12502 Actinidia chinensis
Actinidia32078 Actinidia chinensis
Ah.15g093450 Amaranthus hybridus
AL3G35970 Arabidopsis lyrata
AL3G35980 Arabidopsis lyrata
AL5G18570 Arabidopsis lyrata
AL7G32320 Arabidopsis lyrata
Aqoxy4G02096 Aquilegia oxysepala
Aqoxy4G02100 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2VZW82 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.62D34N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6T7UPN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.88IZ2I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FTMH30 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I3MG1X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I8ZYWJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IG5XIH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LNA654 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R1IBZY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SUSH0G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TRUR1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VCST4V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XAPR04 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZX5EIN Arachis hypogaea
AT3G21820 Arabidopsis thaliana
ATR0008G001 Amborella trichopoda
ATR0804G013 Amborella trichopoda
Atru.chr6.3148 Acer truncatum
Atru.chr8.690 Acer truncatum
AUR62027361 Chenopodium quinoa
AUR62040522 Chenopodium quinoa
AUR62040523 Chenopodium quinoa
BcaB06g26287 Brassica carinata
BcaC05g28122 Brassica carinata
BolC1t04191H Brassica oleracea
BolC5t32893H Brassica oleracea
BraA05t21572Z Brassica rapa
C01p42360 Brassica napus
C05p41560 Brassica napus
CAN.G921.8 Capsicum annuum
CANSAT64G2761 Cannabis sativa
CARHR097810 Cardamine hirsuta
Carub.0003s2190 Capsella rubella
Cc05_g05050 Coffea canephora
CDE01G0775 Ceratophyllum demersum
Cfa014439 Carpinus fangiana
Ciclev10015025m.g Citrus clementina
CiPaw.03G162900 Carya illinoinensis
ClCG02G008450 Citrullus lanatus
COL.COLO4_12984 Corchorus olitorius
Cpa.g.sc8.235 Carica papaya
Cre01.g041100 Chlamydomonas reinhardtii
CsaV3_2G035180 Cucumis sativus L.
CSS0020073 Camellia sinensis var. sinensis
DCAR_012956 Daucus carota
DCAR_012957 Daucus carota
Dinv39687 Davidia involucrata
Duzib052G0092 Durio zibethinus
ECA238G0562 Erigeron canadensis
EL10Ac7g17313 Beta vulgaris
Eucgr.K00818 Eucalyptus grandis
Eucgr.K00819 Eucalyptus grandis
Eucgr.K00821 Eucalyptus grandis
Eucgr.K00822 Eucalyptus grandis
Eucgr.K00824 Eucalyptus grandis
Eucgr.K00839 Eucalyptus grandis
Eucgr.K00860 Eucalyptus grandis
FAN02G0497 Fragaria x ananassa
FAN05G1073 Fragaria x ananassa
FAN09G1075 Fragaria x ananassa
FAN14G5299 Fragaria x ananassa
FvH4_6g43540 Fragaria vesca
Glyma.12G195700 Glycine max
Glyma.13G037950 Glycine max
Glyma.13G306800 Glycine max
Gohir.A01G013300 Gossypium hirsutum
Gohir.D01G014600 Gossypium hirsutum
Gorai.002G016300 Gossypium raimondii
GSVIVG01030624001 Vitis vinifera
HanXRQChr02g0039391 Helianthus annuus
HanXRQChr10g0297501 Helianthus annuus
Haze_12897 Corylus avellana
HPP92_009391 Vanilla planifolia
HPP92_009396 Vanilla planifolia
Hund01107 Selenicereus undatus
Lalb_Chr24g0393071 Lupinus albus
Lj3g0012140 Lotus japonicus
Lj8A122T61 Lonicera japonica
Manes.13G073100 Manihot esculenta
Mapoly0057s0093 Marchantia polymorpha
MBI01_g06556_MAGBIO Magnolia biondii
MBI01_g08957_MAGBIO Magnolia biondii
MBI18_g07895_MAGBIO Magnolia biondii
MBI18_g10800_MAGBIO Magnolia biondii
MBI18_g17390_MAGBIO Magnolia biondii
MBI18_g19140_MAGBIO Magnolia biondii
MBI18_g23508_MAGBIO Magnolia biondii
MBI18_g41217_MAGBIO Magnolia biondii
MBI18_g41692_MAGBIO Magnolia biondii
MCO06G294 Micromonas commoda
MCO15G351 Micromonas commoda
MD09G1105100 Malus domestica
Medtr2g088820 Medicago truncatula
MELO3C019236.2 Cucumis melo
Migut.M00395 Erythranthe guttata
Nitab4.5_0001176g0150 Nicotiana tabacum
Nitab4.5_0001176g0160 Nicotiana tabacum
Nitab4.5_0005894g0040 Nicotiana tabacum
Nn1g03668 Nelumbo nucifera
Oeu041941.2 Olea europaea
Os04g0629100 Oryza sativa ssp. japonica
Peaxi162Scf00007g01229 Petunia axillaris
PGR142G2396 Punica granatum
PGSC0003DMG400026174 Solanum tuberosum
Phvul.005G113700 Phaseolus vulgaris
Potri.017G038700 Populus trichocarpa
Pp3c13_21910 Physcomitrium patens
PRCOL_00001357 Prasinoderma coloniale
Prupe.3G220400 Prunus persica
Psat0s4720g0040 Pisum sativum
Psat5g265280 Pisum sativum
Psat6g077080 Pisum sativum
Psat6g077120 Pisum sativum
PSO541G2722 Papaver somniferum
QL08p033823 Quercus lobata
RcHm_v2.0_Chr2g0160071 Rosa chinensis
Rhsim06G0158100 Rhododendron simsii
Sabra17G0025700 Salix brachista
SalBow7G4184 Salvia bowleyana
Sc12g0002380 Simmondsia chinensis
Sed0014701 Sechium edule
SEGI_20287 Sequoiadendron giganteum
SEGI_29039 Sequoiadendron giganteum
SGA_v2.0_scaffold70G23419 Striga asiatica
SMO167G0005 Selaginella moellendorffii
SMO347G0022 Selaginella moellendorffii
Solyc07g052570.4 Solanum lycopersicum
Sopen07g026180 Solanum pennellii
Sp3g19820 Schrenkiella parvula
TAR624G1196 Trochodendron aralioides
THA.LOC104821752 Tarenaya hassleriana
Thecc.02G162300 Theobroma cacao
Thhalv10020639m.g Eutrema salsugineum
TPR.G4158 Trifolium pratense
TWI18G0733 Tripterygium wilfordii
unitig_26.g9659 Utricularia gibba
vmacro12227 Vaccinium macrocarpon
VMungo1080G1248 Vigna mungo
Zm00001eb069580 Zea mays

User provided reference genes

Program Settings