Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p43170 Brassica napus
A09p24370 Brassica napus
Actinidia12312 Actinidia chinensis
Actinidia12313 Actinidia chinensis
Actinidia19925 Actinidia chinensis
Actinidia19926 Actinidia chinensis
Actinidia31952 Actinidia chinensis
Ah.02g129280 Amaranthus hybridus
Ah.03g134570 Amaranthus hybridus
AL5G13080 Arabidopsis lyrata
Aqoxy3G03547 Aquilegia oxysepala
AT2G03360 Arabidopsis thaliana
AT2G03370 Arabidopsis thaliana
ATR0950G010 Amborella trichopoda
Atru.chr11.1695 Acer truncatum
Atru.chr11.1697 Acer truncatum
Atru.chr11.1699 Acer truncatum
AUR62005869 Chenopodium quinoa
AUR62005871 Chenopodium quinoa
AUR62032861 Chenopodium quinoa
AUR62032863 Chenopodium quinoa
BcaB07g30673 Brassica carinata
BcaB07g30676 Brassica carinata
BcaC04g21491 Brassica carinata
BcaC06g31186 Brassica carinata
BcaC06g34002 Brassica carinata
BolC7t43897H Brassica oleracea
BolC9t55976H Brassica oleracea
BraA06t27205Z Brassica rapa
BraA09t38030Z Brassica rapa
C07p33830 Brassica napus
C09p31200 Brassica napus
CAN.G1340.16 Capsicum annuum
CANSAT80G0946 Cannabis sativa
CARHR145710 Cardamine hirsuta
Carub.0005s0234 Capsella rubella
Cfa008913 Carpinus fangiana
Ciclev10033317m.g Citrus clementina
Ciclev10033490m.g Citrus clementina
CiPaw.05G128300 Carya illinoinensis
COL.COLO4_27939 Corchorus olitorius
COL.COLO4_27940 Corchorus olitorius
Cpa.g.sc1.81 Carica papaya
CSS0000807 Camellia sinensis var. sinensis
CSS0009550 Camellia sinensis var. sinensis
CSS0019610 Camellia sinensis var. sinensis
CSS0021004 Camellia sinensis var. sinensis
CSS0045640 Camellia sinensis var. sinensis
CSS0045940 Camellia sinensis var. sinensis
CSS0048104 Camellia sinensis var. sinensis
Dinv16699 Davidia involucrata
Dinv34110 Davidia involucrata
Duzib251G0817 Durio zibethinus
EL10Ac6g13285 Beta vulgaris
EL10Ac6g13286 Beta vulgaris
EL10Ac6g13288 Beta vulgaris
Eucgr.B03184 Eucalyptus grandis
Eucgr.G02466 Eucalyptus grandis
FAN07G0999 Fragaria x ananassa
FAN07G1970 Fragaria x ananassa
FAN12G1078 Fragaria x ananassa
FAN12G3328 Fragaria x ananassa
FAN17G0789 Fragaria x ananassa
FAN17G1595 Fragaria x ananassa
FAN17G2855 Fragaria x ananassa
FAN22G2320 Fragaria x ananassa
FvH4_4g30540 Fragaria vesca
FvH4_4g30550 Fragaria vesca
FvH4_4g30551 Fragaria vesca
Glyma.02G113200 Glycine max
Gohir.A03G102800 Gossypium hirsutum
Gohir.A13G079700 Gossypium hirsutum
Gohir.D13G079400 Gossypium hirsutum
Gorai.005G143500 Gossypium raimondii
Gorai.013G090800 Gossypium raimondii
GSVIVG01010089001 Vitis vinifera
Haze_11938 Corylus avellana
Haze_11939 Corylus avellana
Hma1.2p1_0354F.1_g133670 Hydrangea macrophylla
Hund25511 Selenicereus undatus
Lj2g0015813 Lotus japonicus
Manes.05G107300 Manihot esculenta
Manes.05G107400 Manihot esculenta
MBI19_g42107_MAGBIO Magnolia biondii
MD00G1177600 Malus domestica
MD00G1177700 Malus domestica
MD13G1066400 Malus domestica
MD13G1066500 Malus domestica
MD16G1065500 Malus domestica
MD16G1065600 Malus domestica
Medtr5g043220 Medicago truncatula
Medtr5g043230 Medicago truncatula
Nitab4.5_0000334g0210 Nicotiana tabacum
Nn4g23318 Nelumbo nucifera
Peaxi162Scf00364g00118 Petunia axillaris
PGR016G0002 Punica granatum
PGR102G1918 Punica granatum
PGR119G0730 Punica granatum
PGSC0003DMG400028330 Solanum tuberosum
Potri.008G092700 Populus trichocarpa
Potri.010G162100 Populus trichocarpa
Potri.010G162200 Populus trichocarpa
Prupe.1G281500 Prunus persica
Prupe.1G281600 Prunus persica
Psat0s2685g0040 Pisum sativum
Psat0s287g0080 Pisum sativum
PSO017G4147 Papaver somniferum
PSO349G0213 Papaver somniferum
PSO591G0111 Papaver somniferum
PSO591G0345 Papaver somniferum
PSO832G2820 Papaver somniferum
QL03p070072 Quercus lobata
QL03p070084 Quercus lobata
QL03p070229 Quercus lobata
QL03p070264 Quercus lobata
QL03p070321 Quercus lobata
QL03p070332 Quercus lobata
QL03p070703 Quercus lobata
RcHm_v2.0_Chr4g0438911 Rosa chinensis
RcHm_v2.0_Chr4g0438921 Rosa chinensis
RcHm_v2.0_Chr4g0438931 Rosa chinensis
Rhsim12G0077100 Rhododendron simsii
Rhsim12G0077200 Rhododendron simsii
Rhsim12G0133700 Rhododendron simsii
Rhsim12G0133800 Rhododendron simsii
Rhsim12G0133900 Rhododendron simsii
Sabra08G0069500 Salix brachista
Sabra10G0123200 Salix brachista
Sabra10G0123300 Salix brachista
Sc04g0007780 Simmondsia chinensis
Sc11g0002240 Simmondsia chinensis
Sc14g0008030 Simmondsia chinensis
Sc14g0008040 Simmondsia chinensis
Solyc05g012660.3 Solanum lycopersicum
Sopen05g007490 Solanum pennellii
Sp2g14290 Schrenkiella parvula
TAR622G0193 Trochodendron aralioides
TAR622G0702 Trochodendron aralioides
THA.LOC104805945 Tarenaya hassleriana
Thecc.02G336900 Theobroma cacao
Thecc.02G337000 Theobroma cacao
Thhalv10005346m.g Eutrema salsugineum
TPR.G22409 Trifolium pratense
TWI14G0675 Tripterygium wilfordii
TWI75G0088 Tripterygium wilfordii
vmacro01334 Vaccinium macrocarpon
vmacro01336 Vaccinium macrocarpon
vmacro16359 Vaccinium macrocarpon
vmacro16360 Vaccinium macrocarpon
VMungo1215G1976 Vigna mungo
VMungo1215G2375 Vigna mungo

User provided reference genes

Program Settings