Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p34360 Brassica napus
Aa31LG8G7130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2463 Anthoceros agrestis
Actinidia04201 Actinidia chinensis
Actinidia22156 Actinidia chinensis
Ah.14g085620 Amaranthus hybridus
AL3G34040 Arabidopsis lyrata
Aqoxy7G04120 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9N9T88 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PNXW1P Arachis hypogaea
AT3G20320 Arabidopsis thaliana
ATR0559G336 Amborella trichopoda
Atru.chr4.1269 Acer truncatum
AUR62031652 Chenopodium quinoa
AUR62038882 Chenopodium quinoa
BcaB04g20660 Brassica carinata
BolC5t33124H Brassica oleracea
BraA01t03533Z Brassica rapa
C01p43770 Brassica napus
CAN.G809.29 Capsicum annuum
CANSAT78G1637 Cannabis sativa
CARHR095970 Cardamine hirsuta
Carub.0003s2027 Capsella rubella
Ca_04336_v3 Cicer arietinum L.
Ca_06168_v3 Cicer arietinum L.
Ca_06185_v3 Cicer arietinum L.
CBR_g24153 Chara braunii
Cc09_g04780 Coffea canephora
CDE08G1601 Ceratophyllum demersum
Cfa004646 Carpinus fangiana
Ciclev10020598m.g Citrus clementina
CiPaw.01G095700 Carya illinoinensis
CiPaw.06G167000 Carya illinoinensis
ClCG02G003310 Citrullus lanatus
ClCG09G018870 Citrullus lanatus
COL.COLO4_08219 Corchorus olitorius
Cpa.g.c39485 Carica papaya
Cre16.g694400 Chlamydomonas reinhardtii
CsaV3_7G002030 Cucumis sativus L.
DCAR_003742 Daucus carota
DCAR_007772 Daucus carota
Dinv17874 Davidia involucrata
Dinv21066 Davidia involucrata
Duzib151G0469 Durio zibethinus
Duzib212G0454 Durio zibethinus
ECA246G0582 Erigeron canadensis
EL10Ac2g03438 Beta vulgaris
Eucgr.I00215 Eucalyptus grandis
FAN19G2557 Fragaria x ananassa
FAN23G2661 Fragaria x ananassa
FAN26G0200 Fragaria x ananassa
FAN28G2322 Fragaria x ananassa
FvH4_1g23450 Fragaria vesca
Glyma.02G275800 Glycine max
Glyma.13G074600 Glycine max
Glyma.14G040300 Glycine max
Glyma.20G048400 Glycine max
Gohir.A02G114100 Gossypium hirsutum
Gohir.A08G075500 Gossypium hirsutum
Gohir.A10G139900 Gossypium hirsutum
Gohir.D10G126900 Gossypium hirsutum
Gorai.011G139800 Gossypium raimondii
GSVIVG01010853001 Vitis vinifera
HanXRQChr02g0033051 Helianthus annuus
HanXRQChr12g0380031 Helianthus annuus
Haze_01451 Corylus avellana
Haze_10243 Corylus avellana
Hma1.2p1_1220F.1_g268110 Hydrangea macrophylla
Hma1.2p1_1220F.1_g268115 Hydrangea macrophylla
Hma1.2p1_2907F.1_g330140 Hydrangea macrophylla
Hma1.2p1_2907F.1_g330145 Hydrangea macrophylla
HPP92_018143 Vanilla planifolia
Hund03181 Selenicereus undatus
Lalb_Chr04g0249531 Lupinus albus
Lalb_Chr17g0347631 Lupinus albus
Lj1A1151T82 Lonicera japonica
Lj1A1151T83 Lonicera japonica
Lj2A342T117 Lonicera japonica
Lj6g0007258 Lotus japonicus
Lsat_1_v5_gn_3_102740 Lactuca sativa
Manes.04G047300 Manihot esculenta
Mapoly0038s0049 Marchantia polymorpha
MBI14_g20102_MAGBIO Magnolia biondii
MCO07G431 Micromonas commoda
MD04G1045800 Malus domestica
MD13G1257900 Malus domestica
MD13G1258100 Malus domestica
Medtr3g040090 Medicago truncatula
Medtr5g088340 Medicago truncatula
MELO3C015704.2 Cucumis melo
Migut.M02025 Erythranthe guttata
MSTRG.24953 Avicennia marina
Nitab4.5_0000632g0010 Nicotiana tabacum
Nitab4.5_0003902g0080 Nicotiana tabacum
Nn2g10363 Nelumbo nucifera
Oeu010462.1 Olea europaea
Oeu010464.1 Olea europaea
Oeu037772.1 Olea europaea
Os01g0974000 Oryza sativa ssp. japonica
Peaxi162Scf00036g02120 Petunia axillaris
Peaxi162Scf00036g02121 Petunia axillaris
Peaxi162Scf00276g01115 Petunia axillaris
Peaxi162Scf00580g00069 Petunia axillaris
PGSC0003DMG400007324 Solanum tuberosum
Phvul.006G021000 Phaseolus vulgaris
Phvul.008G205800 Phaseolus vulgaris
Potri.007G131700 Populus trichocarpa
Potri.017G026100 Populus trichocarpa
Pp3c12_4060 Physcomitrium patens
Pp3c3_12480 Physcomitrium patens
PRCOL_00002736 Prasinoderma coloniale
Prupe.1G198700 Prunus persica
Psat2g021160 Pisum sativum
Psat5g187680 Pisum sativum
PSO151G0006 Papaver somniferum
PSO339G3553 Papaver somniferum
QL02p069440 Quercus lobata
QL10p051275 Quercus lobata
QL11p031638 Quercus lobata
RcHm_v2.0_Chr2g0118821 Rosa chinensis
Rhsim07G0082300 Rhododendron simsii
Sabra07G0106900 Salix brachista
Sabra07G0118800 Salix brachista
Sabra17G0000800 Salix brachista
Sabra17G0015800 Salix brachista
SalBow5G0693 Salvia bowleyana
Sc07g0004100 Simmondsia chinensis
Sc19g0002800 Simmondsia chinensis
Sed0017575 Sechium edule
SEGI_07155 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07839 Striga asiatica
SHI29120 Sapria himalayana
SMO356G0377 Selaginella moellendorffii
Solyc02g082030.3 Solanum lycopersicum
Sopen02g026670 Solanum pennellii
Sp3g18350 Schrenkiella parvula
TAR369G0031 Trochodendron aralioides
TAR623G0168 Trochodendron aralioides
TAR623G1172 Trochodendron aralioides
THA.LOC104817851 Tarenaya hassleriana
Thecc.04G174100 Theobroma cacao
Thhalv10020922m.g Eutrema salsugineum
TPR.G11324 Trifolium pratense
TWI38G0996 Tripterygium wilfordii
unitig_748.g7486 Utricularia gibba
vmacro12410 Vaccinium macrocarpon
vmacro13897 Vaccinium macrocarpon
VMungo0540G0891 Vigna mungo
VMungo0647G1998 Vigna mungo
Zm00001eb139760 Zea mays
Zm00001eb362140 Zea mays

User provided reference genes

Program Settings