Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11140 Brassica napus
Aa31LG3G9220 Aethionema arabicum
Aa31LG5G23580 Aethionema arabicum
Aa31sc29G60 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis
Actinidia08617 Actinidia chinensis
Actinidia31860 Actinidia chinensis
Actinidia34187 Actinidia chinensis
Ah.07g206090 Amaranthus hybridus
AL8G28010 Arabidopsis lyrata
Aqoxy5G04108 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea
AT5G53310 Arabidopsis thaliana
ATR1132G055 Amborella trichopoda
Atru.chr1.284 Acer truncatum
AUR62021051 Chenopodium quinoa
AUR62031482 Chenopodium quinoa
BcaB05g22031 Brassica carinata
BcaB08g35692 Brassica carinata
BcaC03g14431 Brassica carinata
BcaC04g20470 Brassica carinata
BolC2t07987H Brassica oleracea
BolC9t57186H Brassica oleracea
BraA02t06177Z Brassica rapa
C02p18470 Brassica napus
C09p43150 Brassica napus
CAN.G108.18 Capsicum annuum
CAN.G204.5 Capsicum annuum
CANSAT21G0873 Cannabis sativa
CARHR266350 Cardamine hirsuta
Carub.0008s1349 Capsella rubella
Ca_16670_v3 Cicer arietinum L.
CBR_g39340 Chara braunii
Cc02_g01980 Coffea canephora
CDE04G0161 Ceratophyllum demersum
Cfa016354 Carpinus fangiana
Ciclev10005800m.g Citrus clementina
CiPaw.06G006800 Carya illinoinensis
ClCG01G000640 Citrullus lanatus
COL.COLO4_04803 Corchorus olitorius
Cpa.g.sc3.41 Carica papaya
CsaV3_5G000730 Cucumis sativus L.
CSS0002011 Camellia sinensis var. sinensis
CSS0007759 Camellia sinensis var. sinensis
CSS0008262 Camellia sinensis var. sinensis
CSS0011379 Camellia sinensis var. sinensis
CSS0022164 Camellia sinensis var. sinensis
CSS0025713 Camellia sinensis var. sinensis
DCAR_008996 Daucus carota
DCAR_010636 Daucus carota
DCAR_014528 Daucus carota
Dinv28347 Davidia involucrata
Dinv35301 Davidia involucrata
Duzib068G0205 Durio zibethinus
Duzib084G1367 Durio zibethinus
Duzib205G0398 Durio zibethinus
ECA233G3864 Erigeron canadensis
EL10Ac3g05356 Beta vulgaris
Eucgr.A02670 Eucalyptus grandis
FAN01G0333 Fragaria x ananassa
FAN03G1348 Fragaria x ananassa
FAN06G2108 Fragaria x ananassa
FAN06G4897 Fragaria x ananassa
FAN10G0469 Fragaria x ananassa
FAN10G0476 Fragaria x ananassa
FvH4_7g30910 Fragaria vesca
Glyma.04G238900 Glycine max
Glyma.06G124800 Glycine max
Glyma.13G040600 Glycine max
Gohir.A09G183400 Gossypium hirsutum
Gohir.A12G252400 Gossypium hirsutum
Gohir.D09G178100 Gossypium hirsutum
Gohir.D12G253100 Gossypium hirsutum
Gorai.006G200200 Gossypium raimondii
Gorai.008G271400 Gossypium raimondii
GSVIVG01028728001 Vitis vinifera
HanXRQChr13g0392981 Helianthus annuus
Haze_00103 Corylus avellana
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla
HPP92_024433 Vanilla planifolia
Hund27721 Selenicereus undatus
Hund27734 Selenicereus undatus
Lalb_Chr04g0263671 Lupinus albus
Lalb_Chr08g0240671 Lupinus albus
Lalb_Chr23g0271431 Lupinus albus
Lj1g0003063 Lotus japonicus
Lj1g0018821 Lotus japonicus
Lj1P1012T60 Lonicera japonica
Lj3A912T42 Lonicera japonica
Lsat_1_v5_gn_8_6120 Lactuca sativa
Manes.06G156200 Manihot esculenta
Manes.14G019200 Manihot esculenta
Mapoly0143s0028 Marchantia polymorpha
MBI07_g20438_MAGBIO Magnolia biondii
MCO05G504 Micromonas commoda
MD01G1214200 Malus domestica
MD07G1283800 Malus domestica
Medtr3g090670 Medicago truncatula
MELO3C005865.2 Cucumis melo
Migut.F01058 Erythranthe guttata
MSTRG.65 Avicennia marina
Nitab4.5_0000472g0200 Nicotiana tabacum
Nitab4.5_0001331g0180 Nicotiana tabacum
Nitab4.5_0002176g0030 Nicotiana tabacum
Nn2g13651 Nelumbo nucifera
Oeu037114.1 Olea europaea
Os01g0621700 Oryza sativa ssp. japonica
Peaxi162Scf00618g00525 Petunia axillaris
Peaxi162Scf00904g00460 Petunia axillaris
PGR042G1790 Punica granatum
PGR083G1298 Punica granatum
PGSC0003DMG400009097 Solanum tuberosum
PGSC0003DMG400028892 Solanum tuberosum
Phvul.009G135700 Phaseolus vulgaris
Potri.012G033100 Populus trichocarpa
Potri.015G023400 Populus trichocarpa
Pp3c8_900 Physcomitrium patens
Prupe.2G306200 Prunus persica
Psat0s97g0080 Pisum sativum
QL09p011186 Quercus lobata
RcHm_v2.0_Chr1g0379991 Rosa chinensis
Rhsim03G0197700 Rhododendron simsii
Sabra12G0022300 Salix brachista
SalBow2G2244 Salvia bowleyana
Sc19g0001090 Simmondsia chinensis
Sed0002242 Sechium edule
SEGI_09652 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05268 Striga asiatica
SHI54648 Sapria himalayana
SHI54754 Sapria himalayana
SMO361G0401 Selaginella moellendorffii
Solyc03g007480.3 Solanum lycopersicum
Solyc06g051820.4 Solanum lycopersicum
Sopen03g003430 Solanum pennellii
Sopen06g017830 Solanum pennellii
Sp6g15460 Schrenkiella parvula
TAR629G2953 Trochodendron aralioides
TAR636G2931 Trochodendron aralioides
THA.LOC104800283 Tarenaya hassleriana
Thecc.03G191700 Theobroma cacao
Thhalv10014692m.g Eutrema salsugineum
TPR.G33862 Trifolium pratense
TWI23G0483 Tripterygium wilfordii
TWI39G0355 Tripterygium wilfordii
unitig_747.g21853 Utricularia gibba
vmacro06582 Vaccinium macrocarpon
VMungo1309G3087 Vigna mungo
Zm00001eb432120 Zea mays

User provided reference genes

Program Settings