Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21960 Brassica napus
A10p30980 Brassica napus
Aa31LG9G1850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2059 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.939 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.953 Anthoceros agrestis
Actinidia33833 Actinidia chinensis
Ah.08g217650 Amaranthus hybridus
AL7G39910 Arabidopsis lyrata
Aqoxy6G00391 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5NM8YJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E4N141 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WDPT5N Arachis hypogaea
AT4G15570 Arabidopsis thaliana
ATR0584G205 Amborella trichopoda
Atru.chr6.975 Acer truncatum
AUR62002160 Chenopodium quinoa
AUR62015550 Chenopodium quinoa
BcaC06g32230 Brassica carinata
BcaC09g50255 Brassica carinata
BcaNung00260 Brassica carinata
BolC1t02675H Brassica oleracea
BolC9t59912H Brassica oleracea
BraA01t02102Z Brassica rapa
BraA10t45143Z Brassica rapa
C01p27320 Brassica napus
C09p71490 Brassica napus
CAN.G1702.2 Capsicum annuum
CANSAT01G0244 Cannabis sativa
CARHR290000 Cardamine hirsuta
Carub.0007s2624 Capsella rubella
CBR_g54447 Chara braunii
CBR_g54450 Chara braunii
Cc02_g22110 Coffea canephora
CDE04G0462 Ceratophyllum demersum
Cfa005533 Carpinus fangiana
Ciclev10000289m.g Citrus clementina
CiPaw.05G041600 Carya illinoinensis
ClCG04G000310 Citrullus lanatus
COL.COLO4_17905 Corchorus olitorius
Cpa.g.sc301.1 Carica papaya
Cpa.g.sc301.3 Carica papaya
Cre06.g263800 Chlamydomonas reinhardtii
CsaV3_6G051830 Cucumis sativus L.
CSS0038654 Camellia sinensis var. sinensis
DCAR_029227 Daucus carota
DCAR_029228 Daucus carota
DCAR_029231 Daucus carota
DCAR_029233 Daucus carota
DCAR_029234 Daucus carota
Dinv19342 Davidia involucrata
Duzib132G1041 Durio zibethinus
ECA236G2078 Erigeron canadensis
ECA240G0543 Erigeron canadensis
EL10Ac3g04985 Beta vulgaris
Eucgr.E02742 Eucalyptus grandis
FAN07G2807 Fragaria x ananassa
FAN17G2674 Fragaria x ananassa
FAN21G1893 Fragaria x ananassa
FAN22G0235 Fragaria x ananassa
FAN25G3269 Fragaria x ananassa
FvH4_3g12391 Fragaria vesca
FvH4_4g11281 Fragaria vesca
Glyma.05G122467 Glycine max
Glyma.08G077500 Glycine max
Gohir.A03G210500 Gossypium hirsutum
Gohir.D02G232100 Gossypium hirsutum
Gorai.005G259800 Gossypium raimondii
GSVIVG01014677001 Vitis vinifera
GSVIVG01014679001 Vitis vinifera
HanXRQChr11g0337501 Helianthus annuus
Haze_01643 Corylus avellana
Haze_01647 Corylus avellana
Hma1.2p1_1712F.1_g298830 Hydrangea macrophylla
HPP92_019359 Vanilla planifolia
HPP92_019360 Vanilla planifolia
Hund08241 Selenicereus undatus
Lalb_Chr07g0189271 Lupinus albus
Lj1A922G72 Lonicera japonica
Lj4g0023932 Lotus japonicus
Lsat_1_v5_gn_7_79440 Lactuca sativa
Manes.09G064900 Manihot esculenta
Mapoly0048s0059 Marchantia polymorpha
Mapoly0138s0046 Marchantia polymorpha
MBI05_g33207_MAGBIO Magnolia biondii
MCO09G518 Micromonas commoda
MCO13G028 Micromonas commoda
MCO14G060 Micromonas commoda
MD15G1032400 Malus domestica
MD15G1420100 Malus domestica
MD15G1420400 Malus domestica
Medtr1g052700 Medicago truncatula
Medtr5g053930 Medicago truncatula
MELO3C023175.2 Cucumis melo
Migut.B01093 Erythranthe guttata
MSTRG.16550 Avicennia marina
Nitab4.5_0000249g0330 Nicotiana tabacum
Nitab4.5_0009570g0040 Nicotiana tabacum
Nn6g35175 Nelumbo nucifera
Oeu000646.1 Olea europaea
Oeu000647.1 Olea europaea
Os03g0440200 Oryza sativa ssp. japonica
Os04g0424200 Oryza sativa ssp. japonica
Os06g0309400 Oryza sativa ssp. japonica
Os06g0310200 Oryza sativa ssp. japonica
Peaxi162Scf01290g00247 Petunia axillaris
PGR142G0377 Punica granatum
PGSC0003DMG400019688 Solanum tuberosum
PGSC0003DMG401029775 Solanum tuberosum
PGSC0003DMG402029775 Solanum tuberosum
Phvul.002G203001 Phaseolus vulgaris
Phvul.008G162900 Phaseolus vulgaris
Potri.017G056700 Populus trichocarpa
Pp3c10_11160 Physcomitrium patens
Pp3c25_3370 Physcomitrium patens
Pp3c6_5360 Physcomitrium patens
Pp3c6_7590 Physcomitrium patens
Prupe.1G566100 Prunus persica
Psat6g089240 Pisum sativum
PSO541G1917 Papaver somniferum
PSO675G5913 Papaver somniferum
RcHm_v2.0_Chr4g0407481 Rosa chinensis
Rhsim05G0184900 Rhododendron simsii
Sabra17G0048400 Salix brachista
Sabra17G0050100 Salix brachista
Sc08g0003990 Simmondsia chinensis
Sed0014594 Sechium edule
SEGI_08266 Sequoiadendron giganteum
SEGI_09831 Sequoiadendron giganteum
SEGI_17323 Sequoiadendron giganteum
SEGI_25554 Sequoiadendron giganteum
SEGI_32871 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31907 Striga asiatica
SHI16849 Sapria himalayana
SHI16851 Sapria himalayana
SMO174G0214 Selaginella moellendorffii
Solyc01g104640.3 Solanum lycopersicum
Sopen01g047150 Solanum pennellii
Sp7g13870 Schrenkiella parvula
TAR381G0525 Trochodendron aralioides
TAR381G1388 Trochodendron aralioides
THA.LOC104820240 Tarenaya hassleriana
Thecc.02G042000 Theobroma cacao
Thhalv10024423m.g Eutrema salsugineum
TPR.G29922 Trifolium pratense
TWI63G0932 Tripterygium wilfordii
unitig_27.g24936 Utricularia gibba
vmacro19905 Vaccinium macrocarpon
VMungo0251G1433 Vigna mungo
VMungo1383G1427 Vigna mungo
Zm00001eb214930 Zea mays

User provided reference genes

Program Settings