Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p42360 Brassica napus
A09p25090 Brassica napus
Aa31LG2G6400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2844 Anthoceros agrestis
Actinidia14894 Actinidia chinensis
Actinidia14895 Actinidia chinensis
Actinidia16656 Actinidia chinensis
Ah.02g127920 Amaranthus hybridus
Ah.03g137610 Amaranthus hybridus
AL5G14580 Arabidopsis lyrata
Aqoxy3G00293 Aquilegia oxysepala
Aqoxy5G02814 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8WFG9Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B0KB7I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BGN30W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QJ0JEK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V6GCEW Arachis hypogaea
AT3G25920 Arabidopsis thaliana
ATR0171G026 Amborella trichopoda
Atru.chr11.97 Acer truncatum
Atru.chr2.2517 Acer truncatum
AUR62002860 Chenopodium quinoa
AUR62035212 Chenopodium quinoa
BcaB07g30626 Brassica carinata
BcaC04g21408 Brassica carinata
BcaC06g31103 Brassica carinata
BcaC06g33937 Brassica carinata
BolC7t44030H Brassica oleracea
BolC9t56063H Brassica oleracea
BraA06t27151Z Brassica rapa
BraA09t38096Z Brassica rapa
C07p34980 Brassica napus
C09p32130 Brassica napus
CAN.G610.79 Capsicum annuum
CANSAT01G0623 Cannabis sativa
CARHR146910 Cardamine hirsuta
Carub.0005s0378 Capsella rubella
Ca_11170_v3 Cicer arietinum L.
CBR_g6324 Chara braunii
Cc11_g10100 Coffea canephora
CDE05G0568 Ceratophyllum demersum
CDE05G1514 Ceratophyllum demersum
Cfa018591 Carpinus fangiana
Ciclev10016274m.g Citrus clementina
CiPaw.16G065200 Carya illinoinensis
ClCG05G022660 Citrullus lanatus
COL.COLO4_29942 Corchorus olitorius
COL.COLO4_29943 Corchorus olitorius
Cpa.g.sc1.34 Carica papaya
Cre14.g612450 Chlamydomonas reinhardtii
CsaV3_5G034380 Cucumis sativus L.
CSS0041255 Camellia sinensis var. sinensis
DCAR_023656 Daucus carota
DCAR_026734 Daucus carota
Dinv21082 Davidia involucrata
Duzib248G0790 Durio zibethinus
ECA246G4195 Erigeron canadensis
EL10Ac6g14394 Beta vulgaris
Eucgr.G02317 Eucalyptus grandis
FAN07G1541 Fragaria x ananassa
FAN12G1206 Fragaria x ananassa
FAN12G1874 Fragaria x ananassa
FAN22G1660 Fragaria x ananassa
FvH4_4g27310 Fragaria vesca
Glyma.20G116100 Glycine max
Gohir.A03G147200 Gossypium hirsutum
Gohir.A11G325900 Gossypium hirsutum
Gohir.D02G170133 Gossypium hirsutum
Gohir.D02G170233 Gossypium hirsutum
Gohir.D02G170400 Gossypium hirsutum
Gohir.D11G344800 Gossypium hirsutum
Gorai.005G190700 Gossypium raimondii
Gorai.005G191400 Gossypium raimondii
Gorai.007G375200 Gossypium raimondii
GSVIVG01011891001 Vitis vinifera
HanXRQChr15g0476311 Helianthus annuus
HanXRQChr17g0552301 Helianthus annuus
Haze_17489 Corylus avellana
Hma1.2p1_0061F.1_g033840 Hydrangea macrophylla
Hma1.2p1_0061F.1_g033850 Hydrangea macrophylla
Hma1.2p1_0798F.1_g219870 Hydrangea macrophylla
HPP92_009407 Vanilla planifolia
HPP92_009433 Vanilla planifolia
Hund25060 Selenicereus undatus
Lalb_Chr02g0145941 Lupinus albus
Lalb_Chr21g0308901 Lupinus albus
Lj3C1014G6 Lonicera japonica
Lj5g0002032 Lotus japonicus
Lsat_1_v5_gn_3_59080 Lactuca sativa
Manes.14G102900 Manihot esculenta
Mapoly0065s0007 Marchantia polymorpha
MBI19_g21031_MAGBIO Magnolia biondii
MCO09G351 Micromonas commoda
MD13G1041400 Malus domestica
MD16G1042300 Malus domestica
Medtr1g110750 Medicago truncatula
MELO3C012254.2 Cucumis melo
Migut.E00345 Erythranthe guttata
MSTRG.843 Avicennia marina
Nitab4.5_0000057g0250 Nicotiana tabacum
Nitab4.5_0000791g0110 Nicotiana tabacum
Nitab4.5_0003373g0010 Nicotiana tabacum
Nn2g14253 Nelumbo nucifera
Nn3g17852 Nelumbo nucifera
Nn4g23851 Nelumbo nucifera
Nn4g24161 Nelumbo nucifera
Oeu003182.1 Olea europaea
Oeu056572.1 Olea europaea
Os03g0219900 Oryza sativa ssp. japonica
Peaxi162Scf00382g00825 Petunia axillaris
PGR119G1215 Punica granatum
PGSC0003DMG400014544 Solanum tuberosum
Phvul.007G027600 Phaseolus vulgaris
Potri.008G121100 Populus trichocarpa
Potri.010G124301 Populus trichocarpa
Pp3c20_9200 Physcomitrium patens
Pp3c23_7670 Physcomitrium patens
Pp3c24_11450 Physcomitrium patens
Pp3c8_18220 Physcomitrium patens
PRCOL_00000889 Prasinoderma coloniale
Prupe.1G311800 Prunus persica
Psat6g225000 Pisum sativum
PSO675G3483 Papaver somniferum
PSO717G0038 Papaver somniferum
QL01p042268 Quercus lobata
RcHm_v2.0_Chr4g0435111 Rosa chinensis
Rhsim09G0107700 Rhododendron simsii
Sabra08G0091800 Salix brachista
Sabra10G0094300 Salix brachista
Sc11g0003470 Simmondsia chinensis
Sc11g0004060 Simmondsia chinensis
Sed0020611 Sechium edule
SEGI_01542 Sequoiadendron giganteum
SGA_v2.0_scaffold170G38770 Striga asiatica
SMO203G0084 Selaginella moellendorffii
Solyc05g009370.4 Solanum lycopersicum
Sopen05g005170 Solanum pennellii
Sp2g15160 Schrenkiella parvula
TAR371G1076 Trochodendron aralioides
TAR629G2706 Trochodendron aralioides
THA.LOC104825698 Tarenaya hassleriana
Thecc.02G229900 Theobroma cacao
Thhalv10004759m.g Eutrema salsugineum
TPR.G862 Trifolium pratense
TWI31G0637 Tripterygium wilfordii
TWI79G0635 Tripterygium wilfordii
unitig_22.g5574 Utricularia gibba
unitig_24.g30582 Utricularia gibba
vmacro10560 Vaccinium macrocarpon
VMungo0720G0616 Vigna mungo
Zm00001eb008910 Zea mays

User provided reference genes

Program Settings