Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p09020 Brassica napus
A10p20890 Brassica napus
Aa31LG11G10950 Aethionema arabicum
Actinidia00051 Actinidia chinensis
Ah.13g074440 Amaranthus hybridus
AL3G17330 Arabidopsis lyrata
AL6G29950 Arabidopsis lyrata
AL962U10020 Arabidopsis lyrata
Aqoxy237s001 Aquilegia oxysepala
Aqoxy2G03092 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.60DV95 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.68PBWJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I36EUT Arachis hypogaea
AT5G18670 Arabidopsis thaliana
ATR0706G226 Amborella trichopoda
Atru.chr4.2752 Acer truncatum
AUR62014139 Chenopodium quinoa
AUR62041243 Chenopodium quinoa
BcaB01g05257 Brassica carinata
BcaC04g18656 Brassica carinata
BcaC07g40101 Brassica carinata
BolC3t13532H Brassica oleracea
BolC9t58648H Brassica oleracea
BraA03t10226Z Brassica rapa
BraA10t44154Z Brassica rapa
C03p10500 Brassica napus
C09p57790 Brassica napus
CAN.G223.10 Capsicum annuum
CANSAT78G2211 Cannabis sativa
CARHR080910 Cardamine hirsuta
CARHR194330 Cardamine hirsuta
Carub.0006s1697 Capsella rubella
Ca_00575_v3 Cicer arietinum L.
Cc03_g02380 Coffea canephora
CDE01G0466 Ceratophyllum demersum
CDE05G0945 Ceratophyllum demersum
CDE05G3429 Ceratophyllum demersum
CDE11G0555 Ceratophyllum demersum
CDE12G0716 Ceratophyllum demersum
Cfa015494 Carpinus fangiana
Cfa015495 Carpinus fangiana
Ciclev10004689m.g Citrus clementina
CiPaw.01G153400 Carya illinoinensis
ClCG06G005390 Citrullus lanatus
COL.COLO4_13931 Corchorus olitorius
Cpa.g.sc16.112 Carica papaya
Cre06.g270350 Chlamydomonas reinhardtii
CsaV3_6G005730 Cucumis sativus L.
CSS0006318 Camellia sinensis var. sinensis
CSS0040095 Camellia sinensis var. sinensis
DCAR_024613 Daucus carota
Dinv38327 Davidia involucrata
Dinv44427 Davidia involucrata
Duzib052G0769 Durio zibethinus
Duzib151G0511 Durio zibethinus
EL10Ac3g06555 Beta vulgaris
Eucgr.H03767 Eucalyptus grandis
FAN07G0337 Fragaria x ananassa
FAN12G2473 Fragaria x ananassa
FAN12G3224 Fragaria x ananassa
FAN17G2506 Fragaria x ananassa
FAN22G2151 Fragaria x ananassa
FvH4_4g17180 Fragaria vesca
Glyma.13G215000 Glycine max
Glyma.15G098100 Glycine max
Gohir.A02G046300 Gossypium hirsutum
Gohir.A10G101605 Gossypium hirsutum
Gohir.D02G052000 Gossypium hirsutum
Gohir.D10G166400 Gossypium hirsutum
Gorai.005G057300 Gossypium raimondii
Gorai.011G185700 Gossypium raimondii
GSVIVG01017808001 Vitis vinifera
HanXRQChr03g0080071 Helianthus annuus
HanXRQChr03g0080091 Helianthus annuus
HanXRQChr03g0080101 Helianthus annuus
Haze_01059 Corylus avellana
Hma1.2p1_0823F.1_g224600 Hydrangea macrophylla
HPP92_013694 Vanilla planifolia
Hund24912 Selenicereus undatus
Hund24913 Selenicereus undatus
Lalb_Chr18g0055731 Lupinus albus
Lalb_Chr20g0118131 Lupinus albus
Lj6A669G30 Lonicera japonica
LjContig00389g0014251 Lotus japonicus
Lsat_1_v5_gn_5_50601 Lactuca sativa
Lsat_1_v5_gn_5_50720 Lactuca sativa
Manes.03G191000 Manihot esculenta
MBI18_g29028_MAGBIO Magnolia biondii
MBI18_g42097_MAGBIO Magnolia biondii
MD13G1174000 Malus domestica
MD16G1175300 Malus domestica
Medtr2g020240 Medicago truncatula
MELO3C021362.2 Cucumis melo
Migut.G00212 Erythranthe guttata
Migut.O00834 Erythranthe guttata
MSTRG.10053 Avicennia marina
Nitab4.5_0000191g0030 Nicotiana tabacum
Nitab4.5_0000784g0030 Nicotiana tabacum
Nn1g07627 Nelumbo nucifera
Nn1g09875 Nelumbo nucifera
Nn3g21297 Nelumbo nucifera
Nn4g26029 Nelumbo nucifera
Nn6g35128 Nelumbo nucifera
Nn7g36907 Nelumbo nucifera
Nn7g36908 Nelumbo nucifera
Oeu007862.1 Olea europaea
Oeu062885.1 Olea europaea
Os03g0351300 Oryza sativa ssp. japonica
Os07g0667100 Oryza sativa ssp. japonica
Peaxi162Scf00386g00222 Petunia axillaris
PGR015G0006 Punica granatum
PGR104G0002 Punica granatum
PGSC0003DMG400010664 Solanum tuberosum
Phvul.006G161200 Phaseolus vulgaris
Potri.008G204200 Populus trichocarpa
Prupe.1G142400 Prunus persica
Psat1g187120 Pisum sativum
PSO170G0635 Papaver somniferum
PSO210G4605 Papaver somniferum
QL06p007345 Quercus lobata
RcHm_v2.0_Chr4g0420971 Rosa chinensis
Rhsim02G0013700 Rhododendron simsii
Sabra08G0157500 Salix brachista
SalBow2G2518 Salvia bowleyana
SalBow5G1198 Salvia bowleyana
SalBow5G2195 Salvia bowleyana
Sc13g0003610 Simmondsia chinensis
Sc19g0004940 Simmondsia chinensis
Sed0000536 Sechium edule
SEGI_02091 Sequoiadendron giganteum
SGA_v2.0_scaffold142G35699 Striga asiatica
Solyc01g067660.3 Solanum lycopersicum
Sopen01g029610 Solanum pennellii
Sp6g25670 Schrenkiella parvula
TAR365G0265 Trochodendron aralioides
THA.LOC104827120 Tarenaya hassleriana
Thecc.04G277400 Theobroma cacao
Thhalv10013215m.g Eutrema salsugineum
TPR.G1496 Trifolium pratense
TPR.G22897 Trifolium pratense
TWI73G0089 Tripterygium wilfordii
unitig_32.g11750 Utricularia gibba
unitig_748.g8576 Utricularia gibba
vmacro15257 Vaccinium macrocarpon
vmacro22596 Vaccinium macrocarpon
VMungo0540G0329 Vigna mungo
Zm00001eb016870 Zea mays
Zm00001eb016880 Zea mays
Zm00001eb016920 Zea mays
Zm00001eb330060 Zea mays
Zm00001eb394710 Zea mays
Zm00001eb394740 Zea mays

User provided reference genes

Program Settings