Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36770 Brassica napus
A03p40250 Brassica napus
A05p21090 Brassica napus
A05p32270 Brassica napus
A08p04790 Brassica napus
Aa31LG10G5430 Aethionema arabicum
Aa31LG8G4450 Aethionema arabicum
AL1G54940 Arabidopsis lyrata
AL3G30650 Arabidopsis lyrata
Aqoxy2G02458 Aquilegia oxysepala
Aqoxy5G02845 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E7NGHZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V5CRDX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WNQ9XL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XTK2NM Arachis hypogaea
AT1G48330 Arabidopsis thaliana
AT3G17580 Arabidopsis thaliana
ATR0796G174 Amborella trichopoda
Atru.chr4.3187 Acer truncatum
AUR62002531 Chenopodium quinoa
BcaB04g17438 Brassica carinata
BcaB04g18952 Brassica carinata
BcaB04g20835 Brassica carinata
BcaB06g25835 Brassica carinata
BcaB07g33764 Brassica carinata
BcaC01g03751 Brassica carinata
BcaC05g27577 Brassica carinata
BcaC05g28773 Brassica carinata
BcaC07g37143 Brassica carinata
BcaC08g43030 Brassica carinata
BcaC09g48714 Brassica carinata
BolC3t17174H Brassica oleracea
BolC5t32277H Brassica oleracea
BolC5t33617H Brassica oleracea
BolC6t35412H Brassica oleracea
BraA01t03738Z Brassica rapa
BraA03t13178Z Brassica rapa
BraA05t21012Z Brassica rapa
BraA05t22056Z Brassica rapa
BraA06t23656Z Brassica rapa
BraA08t32509Z Brassica rapa
C03p48950 Brassica napus
C05p35610 Brassica napus
C05p48800 Brassica napus
C06p02830 Brassica napus
C08p05160 Brassica napus
CAN.G305.33 Capsicum annuum
CANSAT25G3847 Cannabis sativa
CANSAT78G0586 Cannabis sativa
CARHR037950 Cardamine hirsuta
CARHR092890 Cardamine hirsuta
Carub.0001s3746 Capsella rubella
Carub.0003s1729 Capsella rubella
Ca_02320_v3 Cicer arietinum L.
Cc03_g00010 Coffea canephora
CDE02G4689 Ceratophyllum demersum
CDE08G0719 Ceratophyllum demersum
Cfa015752 Carpinus fangiana
Ciclev10007149m.g Citrus clementina
CiPaw.01G127200 Carya illinoinensis
ClCG05G006950 Citrullus lanatus
COL.COLO4_25048 Corchorus olitorius
Cpa.g.sc146.7 Carica papaya
CsaV3_3G015620 Cucumis sativus L.
DCAR_002559 Daucus carota
DCAR_023420 Daucus carota
DCAR_026926 Daucus carota
DCAR_030417 Daucus carota
Dinv24730 Davidia involucrata
Duzib151G1168 Durio zibethinus
EL10Ac3g06222 Beta vulgaris
Eucgr.B02200 Eucalyptus grandis
Eucgr.H01515 Eucalyptus grandis
Eucgr.H04140 Eucalyptus grandis
FAN07G2633 Fragaria x ananassa
FAN12G2725 Fragaria x ananassa
FAN17G1578 Fragaria x ananassa
FvH4_4g21760 Fragaria vesca
Glyma.09G077700 Glycine max
Glyma.13G117300 Glycine max
Glyma.15G185200 Glycine max
Glyma.17G042600 Glycine max
Gohir.A01G036400 Gossypium hirsutum
Gohir.D01G023700 Gossypium hirsutum
Gorai.002G032200 Gossypium raimondii
GSVIVG01017708001 Vitis vinifera
Haze_00750 Corylus avellana
HPP92_010590 Vanilla planifolia
Hund12264 Selenicereus undatus
Lalb_Chr07g0181551 Lupinus albus
Lalb_Chr08g0232961 Lupinus albus
Lalb_Chr11g0073761 Lupinus albus
Lalb_Chr12g0200501 Lupinus albus
Lalb_Chr13g0299061 Lupinus albus
Lalb_Chr23g0276121 Lupinus albus
Lj2g0017510 Lotus japonicus
Lj4g0003186 Lotus japonicus
Lj6g0012255 Lotus japonicus
Manes.03G213500 Manihot esculenta
MBI18_g40079_MAGBIO Magnolia biondii
MBI18_g46513_MAGBIO Magnolia biondii
MD13G1137200 Malus domestica
MD16G1133100 Malus domestica
Medtr2g044940 Medicago truncatula
Medtr4g124250 Medicago truncatula
Migut.J01631 Erythranthe guttata
Nitab4.5_0000745g0110 Nicotiana tabacum
Nitab4.5_0000978g0020 Nicotiana tabacum
Nitab4.5_0001769g0110 Nicotiana tabacum
Nitab4.5_0003998g0090 Nicotiana tabacum
Nn4g25286 Nelumbo nucifera
Oeu002212.1 Olea europaea
Oeu022716.1 Olea europaea
Os01g0288200 Oryza sativa ssp. japonica
Peaxi162Scf00323g00924 Petunia axillaris
PGR004G2302 Punica granatum
PGR031G2777 Punica granatum
PGSC0003DMG400004597 Solanum tuberosum
PGSC0003DMG400027147 Solanum tuberosum
Phvul.003G124400 Phaseolus vulgaris
Phvul.009G221600 Phaseolus vulgaris
Potri.010G004000 Populus trichocarpa
Prupe.1G208000 Prunus persica
Psat1g016600 Pisum sativum
Psat4g020640 Pisum sativum
PSO761G0543 Papaver somniferum
QL06p014718 Quercus lobata
RcHm_v2.0_Chr4g0427991 Rosa chinensis
Sabra10G0003400 Salix brachista
SalBow6G6449 Salvia bowleyana
Sed0022538 Sechium edule
Sed0023994 Sechium edule
Solyc05g053180.3 Solanum lycopersicum
Solyc12g098880.2 Solanum lycopersicum
Sopen05g031690 Solanum pennellii
Sopen12g033630 Solanum pennellii
Sp1g35290 Schrenkiella parvula
Sp3g15710 Schrenkiella parvula
TAR362G1300 Trochodendron aralioides
TAR365G0774 Trochodendron aralioides
THA.LOC104821815 Tarenaya hassleriana
Thecc.04G314800 Theobroma cacao
Thhalv10011909m.g Eutrema salsugineum
Thhalv10022414m.g Eutrema salsugineum
TPR.G12580 Trifolium pratense
TPR.G29237 Trifolium pratense
unitig_21.g20684 Utricularia gibba
unitig_744.g24175 Utricularia gibba
unitig_746.g26894 Utricularia gibba
Zm00001eb129600 Zea mays
Zm00001eb332330 Zea mays
Zm00001eb354550 Zea mays

User provided reference genes

Program Settings