Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16970 Brassica napus
Aa31sc163G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2696 Anthoceros agrestis
Actinidia03138 Actinidia chinensis
Actinidia31840 Actinidia chinensis
Actinidia31841 Actinidia chinensis
Ah.06g181400 Amaranthus hybridus
Ah.13g069160 Amaranthus hybridus
Ah.13g069170 Amaranthus hybridus
AL7G27320 Arabidopsis lyrata
Aqoxy7G00234 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FZN7A9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G1I5XM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NE53A1 Arachis hypogaea
AT4G25720 Arabidopsis thaliana
ATR0661G169 Amborella trichopoda
Atru.chr1.354 Acer truncatum
AUR62017096 Chenopodium quinoa
AUR62021119 Chenopodium quinoa
AUR62031423 Chenopodium quinoa
AUR62036407 Chenopodium quinoa
AUR62036451 Chenopodium quinoa
BolC1t02052H Brassica oleracea
BraA01t01653Z Brassica rapa
C01p21250 Brassica napus
CAN.G126.24 Capsicum annuum
CAN.G126.29 Capsicum annuum
CANSAT21G0167 Cannabis sativa
CANSAT21G2173 Cannabis sativa
CARHR233170 Cardamine hirsuta
Carub.0007s1524 Capsella rubella
Ca_23692_v3 Cicer arietinum L.
CBR_g3311 Chara braunii
CBR_g3313 Chara braunii
CBR_g727 Chara braunii
Cc02_g02360 Coffea canephora
CDE11G0547 Ceratophyllum demersum
Ciclev10005858m.g Citrus clementina
Ciclev10006767m.g Citrus clementina
CiPaw.05G262100 Carya illinoinensis
ClCG05G008410 Citrullus lanatus
COL.COLO4_30213 Corchorus olitorius
Cpa.g.sc107.111 Carica papaya
Cre11.g476150 Chlamydomonas reinhardtii
CsaV3_3G017470 Cucumis sativus L.
CSS0032352 Camellia sinensis var. sinensis
DCAR_024607 Daucus carota
Dinv35254 Davidia involucrata
Duzib068G1006 Durio zibethinus
Duzib205G1763 Durio zibethinus
ECA232G4896 Erigeron canadensis
ECA233G3504 Erigeron canadensis
EL10Ac3g05418 Beta vulgaris
EL10Ac4g07580 Beta vulgaris
EL10Ac4g07582 Beta vulgaris
Eucgr.A02736 Eucalyptus grandis
FAN03G1377 Fragaria x ananassa
FAN03G2629 Fragaria x ananassa
FAN06G0456 Fragaria x ananassa
FAN06G4134 Fragaria x ananassa
FAN10G1092 Fragaria x ananassa
FAN10G3700 Fragaria x ananassa
FvH4_7g30250 Fragaria vesca
Glyma.09G131600 Glycine max
Glyma.09G131800 Glycine max
Glyma.09G131900 Glycine max
Glyma.16G178900 Glycine max
Gohir.A08G085600 Gossypium hirsutum
Gohir.A11G012400 Gossypium hirsutum
Gohir.D08G109400 Gossypium hirsutum
Gohir.D11G011600 Gossypium hirsutum
Gorai.004G117100 Gossypium raimondii
Gorai.007G013000 Gossypium raimondii
GSVIVG01028857001 Vitis vinifera
HanXRQChr05g0130171 Helianthus annuus
HanXRQChr12g0381081 Helianthus annuus
Haze_00047 Corylus avellana
HPP92_025400 Vanilla planifolia
HPP92_025401 Vanilla planifolia
HPP92_025470 Vanilla planifolia
Hund04788 Selenicereus undatus
Hund11719 Selenicereus undatus
Lalb_Chr03g0034881 Lupinus albus
Lalb_Chr19g0130641 Lupinus albus
Lalb_Chr19g0130651 Lupinus albus
Lj2g0018940 Lotus japonicus
Lsat_1_v5_gn_9_56621 Lactuca sativa
Manes.06G152500 Manihot esculenta
Manes.06G152600 Manihot esculenta
Mapoly0062s0028 Marchantia polymorpha
Mapoly1114s0001 Marchantia polymorpha
MBI12_g08716_MAGBIO Magnolia biondii
MCO01G501 Micromonas commoda
MD01G1208600 Malus domestica
MD14G1086700 Malus domestica
Medtr0057s0080 Medicago truncatula
Medtr0057s0130 Medicago truncatula
Medtr4g012780 Medicago truncatula
MELO3C006936.2 Cucumis melo
Migut.F00289 Erythranthe guttata
MSTRG.27085 Avicennia marina
MSTRG.8711 Avicennia marina
Nitab4.5_0000084g0450 Nicotiana tabacum
Nitab4.5_0000084g0460 Nicotiana tabacum
Nitab4.5_0008522g0010 Nicotiana tabacum
Nitab4.5_0008522g0030 Nicotiana tabacum
Nn1g01641 Nelumbo nucifera
Oeu061663.1 Olea europaea
Os06g0103700 Oryza sativa ssp. japonica
Peaxi162Scf00444g00021 Petunia axillaris
Peaxi162Scf00444g00244 Petunia axillaris
PGR042G1629 Punica granatum
PGSC0003DMG400009500 Solanum tuberosum
Phvul.004G107900 Phaseolus vulgaris
Phvul.004G108600 Phaseolus vulgaris
Potri.004G073700 Populus trichocarpa
Potri.017G146200 Populus trichocarpa
Pp3c10_5500 Physcomitrium patens
PRCOL_00002776 Prasinoderma coloniale
Prupe.2G301200 Prunus persica
Psat0ss29864g0280 Pisum sativum
PSO478G4818 Papaver somniferum
PSO782G5178 Papaver somniferum
QL09p012777 Quercus lobata
QL09p012782 Quercus lobata
RcHm_v2.0_Chr1g0378381 Rosa chinensis
Rhsim09G0200700 Rhododendron simsii
Sabra04G0048400 Salix brachista
SalBow4G1885 Salvia bowleyana
Sc25g0000700 Simmondsia chinensis
Sed0015096 Sechium edule
SEGI_06548 Sequoiadendron giganteum
SEGI_23205 Sequoiadendron giganteum
SEGI_30519 Sequoiadendron giganteum
SGA_v2.0_scaffold60G21112 Striga asiatica
SHI13754 Sapria himalayana
SMO231G0015 Selaginella moellendorffii
SMO351G0007 Selaginella moellendorffii
Solyc03g007900.3 Solanum lycopersicum
Solyc03g007920.4 Solanum lycopersicum
Sopen03g003850 Solanum pennellii
Sopen03g003870 Solanum pennellii
Sp7g23750 Schrenkiella parvula
Thecc.03G184500 Theobroma cacao
Thhalv10025771m.g Eutrema salsugineum
TPR.G33517 Trifolium pratense
unitig_0.g2469 Utricularia gibba
unitig_52.g17730 Utricularia gibba
vmacro09814 Vaccinium macrocarpon
VMungo0464G1912 Vigna mungo
VMungo0464G2071 Vigna mungo
Zm00001eb268480 Zea mays

User provided reference genes

Program Settings