Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p09070 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis
Actinidia06509 Actinidia chinensis
Actinidia19623 Actinidia chinensis
Ah.03g139860 Amaranthus hybridus
Ah.05g171370 Amaranthus hybridus
AL8G43110 Arabidopsis lyrata
Aqoxy6G00847 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea
AT5G65520 Arabidopsis thaliana
ATR0767G042 Amborella trichopoda
Atru.chr13.996 Acer truncatum
AUR62003673 Chenopodium quinoa
AUR62017983 Chenopodium quinoa
BcaB04g20019 Brassica carinata
BcaC04g23260 Brassica carinata
BolC9t53956H Brassica oleracea
BraA09t36559Z Brassica rapa
C06p39250 Brassica napus
C09p10560 Brassica napus
CAN.G252.11 Capsicum annuum
CAN.G475.10 Capsicum annuum
CANSAT01G3166 Cannabis sativa
CANSAT25G1975 Cannabis sativa
CARHR279500 Cardamine hirsuta
Carub.0008s2638 Capsella rubella
Ca_16010_v3 Cicer arietinum L.
Ca_22619_v3 Cicer arietinum L.
Cc07_g14000 Coffea canephora
Cc10_g08430 Coffea canephora
CDE02G1147 Ceratophyllum demersum
CDE04G0511 Ceratophyllum demersum
Cfa006874 Carpinus fangiana
Cfa013807 Carpinus fangiana
Ciclev10002461m.g Citrus clementina
CiPaw.07G046500 Carya illinoinensis
CiPaw.08G056600 Carya illinoinensis
ClCG08G011630 Citrullus lanatus
COL.COLO4_27367 Corchorus olitorius
COL.COLO4_35262 Corchorus olitorius
Cpa.g.sc21.29 Carica papaya
CsaV3_2G030200 Cucumis sativus L.
CSS0033796 Camellia sinensis var. sinensis
CSS0043130 Camellia sinensis var. sinensis
DCAR_003444 Daucus carota
DCAR_009556 Daucus carota
DCAR_009557 Daucus carota
Dinv13591 Davidia involucrata
Duzib041G0289 Durio zibethinus
Duzib093G0339 Durio zibethinus
Duzib264G0833 Durio zibethinus
ECA247G1048 Erigeron canadensis
EL10Ac1g00504 Beta vulgaris
EL10Ac2g03122 Beta vulgaris
EL10Ac6g15193 Beta vulgaris
Eucgr.F00428 Eucalyptus grandis
FAN28G2101 Fragaria x ananassa
FvH4_1g19520 Fragaria vesca
FvH4_5g34561 Fragaria vesca
Glyma.04G095900 Glycine max
Glyma.06G097600 Glycine max
Glyma.08G278900 Glycine max
Glyma.14G182600 Glycine max
Gohir.A05G219000 Gossypium hirsutum
Gohir.A11G050200 Gossypium hirsutum
Gohir.D05G221700 Gossypium hirsutum
Gohir.D11G053600 Gossypium hirsutum
Gorai.007G058400 Gossypium raimondii
Gorai.009G228900 Gossypium raimondii
HanXRQChr02g0046211 Helianthus annuus
HanXRQChr09g0250941 Helianthus annuus
HanXRQChr15g0485271 Helianthus annuus
Haze_03885 Corylus avellana
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla
HPP92_003649 Vanilla planifolia
Lalb_Chr04g0252771 Lupinus albus
Lalb_Chr08g0242581 Lupinus albus
Lj1g0017346 Lotus japonicus
Lj4C87T6 Lonicera japonica
Lj4g0004938 Lotus japonicus
Lju188C4T4 Lonicera japonica
Lsat_1_v5_gn_8_20321 Lactuca sativa
Manes.05G189800 Manihot esculenta
Manes.13G100500 Manihot esculenta
Mapoly0104s0024 Marchantia polymorpha
MBI16_g31265_MAGBIO Magnolia biondii
MD08G1200200 Malus domestica
MD15G1310800 Malus domestica
MD15G1387400 Malus domestica
Medtr3g100100 Medicago truncatula
Medtr8g068400 Medicago truncatula
MELO3C011082.2 Cucumis melo
Migut.K00806 Erythranthe guttata
Migut.N02848 Erythranthe guttata
MSTRG.24425 Avicennia marina
Nitab4.5_0010932g0010 Nicotiana tabacum
Nitab4.5_0011537g0010 Nicotiana tabacum
Nn5g29856 Nelumbo nucifera
Oeu054771.1 Olea europaea
Os02g0204000 Oryza sativa ssp. japonica
Peaxi162Scf00085g00235 Petunia axillaris
Peaxi162Scf00454g10013 Petunia axillaris
PGR042G2328 Punica granatum
PGSC0003DMG400016127 Solanum tuberosum
PGSC0003DMG401009338 Solanum tuberosum
Phvul.003G288400 Phaseolus vulgaris
Phvul.009G035900 Phaseolus vulgaris
Potri.002G111300 Populus trichocarpa
Prupe.1G533800 Prunus persica
Prupe.6G203100 Prunus persica
Psat4g116960 Pisum sativum
Psat5g049360 Pisum sativum
Psat6g017240 Pisum sativum
PSO541G6255 Papaver somniferum
QL06p035918 Quercus lobata
QL09p018000 Quercus lobata
RcHm_v2.0_Chr2g0111021 Rosa chinensis
RcHm_v2.0_Chr7g0235251 Rosa chinensis
Rhsim07G0212500 Rhododendron simsii
Rhsim10G0173500 Rhododendron simsii
Sabra02G0087800 Salix brachista
SalBow5G0620 Salvia bowleyana
SalBow5G1021 Salvia bowleyana
Sc16g0000570 Simmondsia chinensis
Sc26g0002870 Simmondsia chinensis
Sc26g0002990 Simmondsia chinensis
Sc26g0003620 Simmondsia chinensis
Sed0006831 Sechium edule
SEGI_01557 Sequoiadendron giganteum
SEGI_08621 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17227 Striga asiatica
SGA_v2.0_scaffold48G17844 Striga asiatica
Solyc04g076470.1 Solanum lycopersicum
Solyc11g010720.1 Solanum lycopersicum
Sopen04g030220 Solanum pennellii
Sopen11g005530 Solanum pennellii
Sp2g28620 Schrenkiella parvula
TAR376G0132 Trochodendron aralioides
TAR628G0215 Trochodendron aralioides
THA.LOC104801678 Tarenaya hassleriana
Thecc.01G089300 Theobroma cacao
Thecc.08G072400 Theobroma cacao
Thhalv10005489m.g Eutrema salsugineum
TPR.G6370 Trifolium pratense
TWI12G1102 Tripterygium wilfordii
TWI74G0279 Tripterygium wilfordii
vmacro04645 Vaccinium macrocarpon
VMungo0647G0422 Vigna mungo
VMungo1309G0581 Vigna mungo
VMungo1309G1710 Vigna mungo
Zm00001eb235460 Zea mays

User provided reference genes

Program Settings