Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p13460 Brassica napus
Aa31LG5G4970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3457 Anthoceros agrestis
Actinidia23522 Actinidia chinensis
Actinidia40139 Actinidia chinensis
Ah.13g071590 Amaranthus hybridus
AL4G27420 Arabidopsis lyrata
Aqoxy5G00448 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1MJ7K6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FCT4V3 Arachis hypogaea
AT2G32040 Arabidopsis thaliana
ATR0697G258 Amborella trichopoda
Atru.chr4.2445 Acer truncatum
AUR62033674 Chenopodium quinoa
AUR62034714 Chenopodium quinoa
BcaB02g10442 Brassica carinata
BolC4t23305H Brassica oleracea
BraA05t20282Z Brassica rapa
C04p17580 Brassica napus
CAN.G1094.10 Capsicum annuum
CAN.G231.6 Capsicum annuum
CANSAT78G1282 Cannabis sativa
CARHR125850 Cardamine hirsuta
Carub.0004s1339 Capsella rubella
Ca_10871_v3 Cicer arietinum L.
CBR_g48170 Chara braunii
CBR_g55014 Chara braunii
Cc03_g03950 Coffea canephora
CDE05G2148 Ceratophyllum demersum
CDE10G0341 Ceratophyllum demersum
Cfa015666 Carpinus fangiana
Ciclev10004656m.g Citrus clementina
CiPaw.01G167800 Carya illinoinensis
CiPaw.02G098300 Carya illinoinensis
CiPaw.02G098400 Carya illinoinensis
ClCG06G006290 Citrullus lanatus
COL.COLO4_21494 Corchorus olitorius
Cpa.g.sc1119.2 Carica papaya
Cre01.g007737 Chlamydomonas reinhardtii
Cre14.g615900 Chlamydomonas reinhardtii
CsaV3_3G013160 Cucumis sativus L.
CsaV3_7G022430 Cucumis sativus L.
CSS0048363 Camellia sinensis var. sinensis
DCAR_027227 Daucus carota
Dinv44547 Davidia involucrata
Duzib151G0438 Durio zibethinus
ECA233G1572 Erigeron canadensis
EL10Ac3g06491 Beta vulgaris
Eucgr.B01079 Eucalyptus grandis
Eucgr.L00392 Eucalyptus grandis
FAN07G1746 Fragaria x ananassa
FAN12G2146 Fragaria x ananassa
FAN12G4091 Fragaria x ananassa
FAN17G0582 Fragaria x ananassa
FvH4_4g16240 Fragaria vesca
Glyma.10G247100 Glycine max
Glyma.20G147000 Glycine max
Gohir.A09G216700 Gossypium hirsutum
Gohir.A10G118200 Gossypium hirsutum
Gohir.D09G219100 Gossypium hirsutum
Gohir.D10G148500 Gossypium hirsutum
Gorai.006G240100 Gossypium raimondii
Gorai.011G165800 Gossypium raimondii
GSVIVG01017999001 Vitis vinifera
HanXRQChr09g0248161 Helianthus annuus
Haze_00881 Corylus avellana
Hma1.2p1_0602F.1_g187450 Hydrangea macrophylla
HPP92_017654 Vanilla planifolia
Hund12114 Selenicereus undatus
Lalb_Chr06g0160661 Lupinus albus
Lj3A732T76 Lonicera japonica
Lj5g0014892 Lotus japonicus
Lj6C606T6 Lonicera japonica
Lsat_1_v5_gn_7_68861 Lactuca sativa
Manes.15G030000 Manihot esculenta
Mapoly0029s0011 Marchantia polymorpha
MCO07G546 Micromonas commoda
MD13G1195200 Malus domestica
MD13G1195300 Malus domestica
MD16G1195900 Malus domestica
Medtr1g103530 Medicago truncatula
Medtr1g103540 Medicago truncatula
MELO3C006523.2 Cucumis melo
MELO3C012658.2 Cucumis melo
Migut.G00349 Erythranthe guttata
Migut.N00194 Erythranthe guttata
MSTRG.21862 Avicennia marina
MSTRG.4038 Avicennia marina
MSTRG.9975 Avicennia marina
Nitab4.5_0000321g0160 Nicotiana tabacum
Nitab4.5_0000853g0070 Nicotiana tabacum
Nitab4.5_0004135g0040 Nicotiana tabacum
Nitab4.5_0006783g0050 Nicotiana tabacum
Nn1g02356 Nelumbo nucifera
Nn6g34093 Nelumbo nucifera
Oeu061171.2 Olea europaea
Os03g0795000 Oryza sativa ssp. japonica
Os07g0172900 Oryza sativa ssp. japonica
Peaxi162Scf00092g00516 Petunia axillaris
Peaxi162Scf00192g01212 Petunia axillaris
PGR142G1147 Punica granatum
PGSC0003DMG401016307 Solanum tuberosum
PGSC0003DMG401032252 Solanum tuberosum
PGSC0003DMG402016307 Solanum tuberosum
Phvul.007G058300 Phaseolus vulgaris
Potri.010G085900 Populus trichocarpa
Pp3c10_2680 Physcomitrium patens
Pp3c19_4580 Physcomitrium patens
Pp3c22_1880 Physcomitrium patens
PRCOL_00006204 Prasinoderma coloniale
Prupe.1G015900 Prunus persica
Psat6g206760 Pisum sativum
PSO210G1823 Papaver somniferum
QL06p002038 Quercus lobata
RcHm_v2.0_Chr4g0415811 Rosa chinensis
Rhsim02G0026100 Rhododendron simsii
Sabra10G0057800 Salix brachista
SalBow2G1062 Salvia bowleyana
SalBow3G1906 Salvia bowleyana
Sc13g0004500 Simmondsia chinensis
Sc13g0006040 Simmondsia chinensis
Sed0000965 Sechium edule
Sed0012364 Sechium edule
Sed0026432 Sechium edule
SEGI_40549 Sequoiadendron giganteum
SGA_v2.0_scaffold139G35352 Striga asiatica
SGA_v2.0_scaffold151G36729 Striga asiatica
SGA_v2.0_scaffold165G38278 Striga asiatica
SHI00465 Sapria himalayana
SMO117G0132 Selaginella moellendorffii
Solyc06g054100.2 Solanum lycopersicum
Solyc06g054110.3 Solanum lycopersicum
Solyc06g054120.2 Solanum lycopersicum
Solyc09g082200.2 Solanum lycopersicum
Sopen06g019270 Solanum pennellii
Sopen09g031080 Solanum pennellii
Sp4g14460 Schrenkiella parvula
TAR365G0489 Trochodendron aralioides
TAR636G3273 Trochodendron aralioides
THA.LOC104800958 Tarenaya hassleriana
THA.LOC104816051 Tarenaya hassleriana
Thecc.04G234100 Theobroma cacao
Thhalv10016461m.g Eutrema salsugineum
TPR.G5459 Trifolium pratense
TWI09G1476 Tripterygium wilfordii
unitig_749.g14079 Utricularia gibba
vmacro15351 Vaccinium macrocarpon
VMungo0720G0424 Vigna mungo
Zm00001eb016520 Zea mays
Zm00001eb060580 Zea mays
Zm00001eb117050 Zea mays
Zm00001eb301040 Zea mays

User provided reference genes

Program Settings