Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00240 Brassica napus
A08p23810 Brassica napus
Aa31LG6G16140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.356 Anthoceros agrestis
Actinidia00549 Actinidia chinensis
Actinidia33624 Actinidia chinensis
Ah.01g019120 Amaranthus hybridus
AL7G11060 Arabidopsis lyrata
Aqoxy6G01195 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0UP1AG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IE0TZZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P63ZP0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VA1NMQ Arachis hypogaea
AT4G39120 Arabidopsis thaliana
ATR1158G041 Amborella trichopoda
Atru.chr5.3082 Acer truncatum
AUR62011286 Chenopodium quinoa
AUR62016772 Chenopodium quinoa
AUR62024760 Chenopodium quinoa
AUR62038677 Chenopodium quinoa
AUR62040957 Chenopodium quinoa
BcaB03g12244 Brassica carinata
BcaC01g00283 Brassica carinata
BolC1t00041H Brassica oleracea
BolC3t20019H Brassica oleracea
BraA01t00031Z Brassica rapa
BraA08t34333Z Brassica rapa
C01p00350 Brassica napus
C03p77610 Brassica napus
CAN.G1544.7 Capsicum annuum
CANSAT11G2513 Cannabis sativa
CARHR247630 Cardamine hirsuta
Carub.0007s0100 Capsella rubella
Ca_28938_v3 Cicer arietinum L.
CBR_g50245 Chara braunii
Cc02_g17240 Coffea canephora
Cc02_g17250 Coffea canephora
Cc02_g17260 Coffea canephora
CDE07G1572 Ceratophyllum demersum
Cfa002201 Carpinus fangiana
Cfa005049 Carpinus fangiana
Cfa005051 Carpinus fangiana
Cfa005052 Carpinus fangiana
Ciclev10028779m.g Citrus clementina
CiPaw.06G132800 Carya illinoinensis
ClCG11G004130 Citrullus lanatus
Cpa.g.sc106.2 Carica papaya
Cre17.g723550 Chlamydomonas reinhardtii
CsaV3_2G015040 Cucumis sativus L.
CSS0042553 Camellia sinensis var. sinensis
CSS0047334 Camellia sinensis var. sinensis
CSS0049052 Camellia sinensis var. sinensis
DCAR_023012 Daucus carota
DCAR_030585 Daucus carota
Dinv23488 Davidia involucrata
Dinv42038 Davidia involucrata
Duzib052G1174 Durio zibethinus
ECA240G1659 Erigeron canadensis
EL10Ac4g09012 Beta vulgaris
EL10Ac9g21691 Beta vulgaris
Eucgr.G01697 Eucalyptus grandis
FAN15G0894 Fragaria x ananassa
FAN24G2181 Fragaria x ananassa
FvH4_2g09630 Fragaria vesca
Glyma.04G009800 Glycine max
Glyma.06G009800 Glycine max
Gohir.A03G196800 Gossypium hirsutum
Gohir.D02G218100 Gossypium hirsutum
Gorai.005G246000 Gossypium raimondii
GSVIVG01023826001 Vitis vinifera
HanXRQChr03g0069331 Helianthus annuus
Haze_02333 Corylus avellana
Haze_27473 Corylus avellana
HPP92_022533 Vanilla planifolia
Hund00240 Selenicereus undatus
Lalb_Chr08g0246691 Lupinus albus
Lj1g0012947 Lotus japonicus
Lj5A193T104 Lonicera japonica
Lj9A377G93 Lonicera japonica
Lsat_1_v5_gn_9_107961 Lactuca sativa
Manes.04G087050 Manihot esculenta
Mapoly0009s0236 Marchantia polymorpha
MBI10_g00756_MAGBIO Magnolia biondii
MCO05G057 Micromonas commoda
MD05G1061200 Malus domestica
MD10G1068900 Malus domestica
Medtr3g117220 Medicago truncatula
MELO3C023324.2 Cucumis melo
Migut.B00208 Erythranthe guttata
Nitab4.5_0000632g0120 Nicotiana tabacum
Nitab4.5_0002361g0020 Nicotiana tabacum
Nitab4.5_0003234g0080 Nicotiana tabacum
Nitab4.5_0003611g0070 Nicotiana tabacum
Nitab4.5_0005441g0050 Nicotiana tabacum
Nitab4.5_0005796g0050 Nicotiana tabacum
Nitab4.5_0015623g0010 Nicotiana tabacum
Nn1g05957 Nelumbo nucifera
Nn5g28946 Nelumbo nucifera
Nn5g29707 Nelumbo nucifera
Oeu020727.1 Olea europaea
Oeu046144.1 Olea europaea
Os07g0191000 Oryza sativa ssp. japonica
Os09g0322900 Oryza sativa ssp. japonica
Peaxi162Scf00016g00435 Petunia axillaris
Peaxi162Scf01049g00011 Petunia axillaris
Peaxi162Scf01112g00011 Petunia axillaris
PGR042G3536 Punica granatum
PGSC0003DMG400022510 Solanum tuberosum
PGSC0003DMG400030950 Solanum tuberosum
Phvul.009G005100 Phaseolus vulgaris
Potri.009G120600 Populus trichocarpa
Pp3c11_19670 Physcomitrium patens
Pp3c14_5280 Physcomitrium patens
Pp3c7_6620 Physcomitrium patens
PRCOL_00005559 Prasinoderma coloniale
Prupe.8G090900 Prunus persica
Psat5g005400 Pisum sativum
PSO339G6113 Papaver somniferum
QL11p045210 Quercus lobata
RcHm_v2.0_Chr6g0265981 Rosa chinensis
Rhsim11G0180400 Rhododendron simsii
Sabra09G0092900 Salix brachista
SalBow6G3984 Salvia bowleyana
Sc08g0000660 Simmondsia chinensis
Sed0009940 Sechium edule
SEGI_40809 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13194 Striga asiatica
SHI05562 Sapria himalayana
SMO356G0699 Selaginella moellendorffii
Solyc01g097780.1 Solanum lycopersicum
Solyc01g109930.4 Solanum lycopersicum
Sopen01g041380 Solanum pennellii
Sopen01g052120 Solanum pennellii
Sp7g36700 Schrenkiella parvula
TAR628G0683 Trochodendron aralioides
TAR628G0727 Trochodendron aralioides
THA.LOC104807751 Tarenaya hassleriana
Thecc.02G080400 Theobroma cacao
Thhalv10025644m.g Eutrema salsugineum
TPR.G32188 Trifolium pratense
TWI31G1285 Tripterygium wilfordii
TWI34G1838 Tripterygium wilfordii
TWI75G0248 Tripterygium wilfordii
TWI77G0152 Tripterygium wilfordii
TWI77G0224 Tripterygium wilfordii
TWI77G0506 Tripterygium wilfordii
TWI77G0992 Tripterygium wilfordii
unitig_37.g12822 Utricularia gibba
vmacro02078 Vaccinium macrocarpon
vmacro17459 Vaccinium macrocarpon
VMungo1309G2240 Vigna mungo
Zm00001eb333360 Zea mays

User provided reference genes

Program Settings