Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p38060 Brassica napus
A10p30660 Brassica napus
Aa31LG11G6730 Aethionema arabicum
Aa31LG3G4550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2751 Anthoceros agrestis
Actinidia29693 Actinidia chinensis
Actinidia33931 Actinidia chinensis
Ah.16g103410 Amaranthus hybridus
AL3G22760 Arabidopsis lyrata
AL6G15600 Arabidopsis lyrata
Aqoxy4G02603 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3RRJ97 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C37ZT5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E2DHW8 Arachis hypogaea
AT3G11240 Arabidopsis thaliana
AT5G05700 Arabidopsis thaliana
ATR0618G256 Amborella trichopoda
Atru.chr12.19 Acer truncatum
AUR62012235 Chenopodium quinoa
AUR62022867 Chenopodium quinoa
BcaB06g25636 Brassica carinata
BcaC05g29392 Brassica carinata
BcaC06g32278 Brassica carinata
BolC5t34349H Brassica oleracea
BolC9t59876H Brassica oleracea
BraA05t22598Z Brassica rapa
BraA10t45107Z Brassica rapa
C05p56850 Brassica napus
C09p71140 Brassica napus
CAN.G17.11 Capsicum annuum
CANSAT35G0855 Cannabis sativa
CARHR085800 Cardamine hirsuta
CARHR207580 Cardamine hirsuta
Carub.0003s1055 Capsella rubella
Carub.0006s0459 Capsella rubella
Ca_15268_v3 Cicer arietinum L.
CBR_g49483 Chara braunii
Cc02_g06650 Coffea canephora
CDE03G0502 Ceratophyllum demersum
CDE04G1491 Ceratophyllum demersum
Cfa001330 Carpinus fangiana
Cfa022588 Carpinus fangiana
Ciclev10030943m.g Citrus clementina
CiPaw.02G191600 Carya illinoinensis
ClCG11G006230 Citrullus lanatus
COL.COLO4_25696 Corchorus olitorius
Cpa.g.sc19.187 Carica papaya
Cpa.g.sc19.188 Carica papaya
Cpa.g.sc19.189 Carica papaya
Cre13.g580600 Chlamydomonas reinhardtii
CsaV3_6G001760 Cucumis sativus L.
CSS0014761 Camellia sinensis var. sinensis
CSS0028164 Camellia sinensis var. sinensis
DCAR_028567 Daucus carota
Dinv17981 Davidia involucrata
Dinv34395 Davidia involucrata
Duzib114G0112 Durio zibethinus
ECA238G1235 Erigeron canadensis
EL10Ac2g04814 Beta vulgaris
Eucgr.J00226 Eucalyptus grandis
Eucgr.J00227 Eucalyptus grandis
Eucgr.J00228 Eucalyptus grandis
Eucgr.J00230 Eucalyptus grandis
Eucgr.J00232 Eucalyptus grandis
FAN01G3126 Fragaria x ananassa
FAN03G0827 Fragaria x ananassa
FAN06G3796 Fragaria x ananassa
FAN10G0865 Fragaria x ananassa
FvH4_7g24330 Fragaria vesca
Glyma.11G228500 Glycine max
Glyma.18G028600 Glycine max
Gohir.A10G235000 Gossypium hirsutum
Gohir.D10G247400 Gossypium hirsutum
Gorai.011G285800 Gossypium raimondii
GSVIVG01032843001 Vitis vinifera
HanXRQChr06g0172261 Helianthus annuus
HanXRQChr14g0459841 Helianthus annuus
HanXRQChr14g0459851 Helianthus annuus
Haze_17213 Corylus avellana
Haze_17214 Corylus avellana
Hma1.2p1_0446F.1_g154570 Hydrangea macrophylla
HPP92_018033 Vanilla planifolia
HPP92_018034 Vanilla planifolia
Hund13846 Selenicereus undatus
Hund15948 Selenicereus undatus
Lalb_Chr15g0084181 Lupinus albus
Lalb_Chr18g0052631 Lupinus albus
Lj1C953T18 Lonicera japonica
Lj6g0016498 Lotus japonicus
Lsat_1_v5_gn_2_122780 Lactuca sativa
Manes.10G013900 Manihot esculenta
Mapoly0067s0057 Marchantia polymorpha
MBI05_g34496_MAGBIO Magnolia biondii
MCO15G553 Micromonas commoda
MD01G1132500 Malus domestica
MD07G1220300 Malus domestica
Medtr3g070310 Medicago truncatula
MELO3C008290.2 Cucumis melo
Migut.F01373 Erythranthe guttata
Migut.F01374 Erythranthe guttata
MSTRG.213 Avicennia marina
Nitab4.5_0000802g0040 Nicotiana tabacum
Nitab4.5_0005174g0010 Nicotiana tabacum
Nn2g11459 Nelumbo nucifera
Oeu025172.2 Olea europaea
Oeu048694.1 Olea europaea
Os05g0446800 Oryza sativa ssp. japonica
Peaxi162Scf00825g00019 Petunia axillaris
Peaxi162Scf01208g00144 Petunia axillaris
Peaxi162Scf01208g00156 Petunia axillaris
PGR044G2346 Punica granatum
PGSC0003DMG400023817 Solanum tuberosum
Phvul.001G241900 Phaseolus vulgaris
Potri.008G067000 Populus trichocarpa
Potri.010G190100 Populus trichocarpa
Pp3c3_24950 Physcomitrium patens
PRCOL_00002395 Prasinoderma coloniale
Prupe.2G248700 Prunus persica
Psat5g126400 Pisum sativum
PSO339G2357 Papaver somniferum
PSO339G5386 Papaver somniferum
PSO384G4393 Papaver somniferum
QL01p024866 Quercus lobata
RcHm_v2.0_Chr1g0369991 Rosa chinensis
Rhsim03G0142100 Rhododendron simsii
Sabra08G0049200 Salix brachista
Sabra10G0146600 Salix brachista
Sc11g0007180 Simmondsia chinensis
Sed0013753 Sechium edule
SEGI_28443 Sequoiadendron giganteum
SEGI_33236 Sequoiadendron giganteum
SEGI_38081 Sequoiadendron giganteum
SEGI_40640 Sequoiadendron giganteum
SGA_v2.0_scaffold76G25082 Striga asiatica
SHI03466 Sapria himalayana
SMO118G0549 Selaginella moellendorffii
Solyc06g051760.3 Solanum lycopersicum
Sopen06g017720 Solanum pennellii
Sp3g09520 Schrenkiella parvula
Sp6g37190 Schrenkiella parvula
TAR369G0014 Trochodendron aralioides
TAR623G0226 Trochodendron aralioides
THA.LOC104816553 Tarenaya hassleriana
Thecc.10G020600 Theobroma cacao
Thhalv10013820m.g Eutrema salsugineum
TPR.G2507 Trifolium pratense
TWI09G1217 Tripterygium wilfordii
TWI73G0703 Tripterygium wilfordii
unitig_62.g23928 Utricularia gibba
vmacro06977 Vaccinium macrocarpon
VMungo1383G0266 Vigna mungo
Zm00001eb348230 Zea mays

User provided reference genes

Program Settings