Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p11060 Brassica napus
A04p21550 Brassica napus
A07p18980 Brassica napus
A10p17850 Brassica napus
Aa31LG5G7800 Aethionema arabicum
Ah.01g002910 Amaranthus hybridus
Ah.01g014340 Amaranthus hybridus
AL4G21610 Arabidopsis lyrata
AL8G37240 Arabidopsis lyrata
Aqoxy1G01237 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5L1A31 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C3ZM5V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X5FS8C Arachis hypogaea
AT2G28410 Arabidopsis thaliana
AT5G60650 Arabidopsis thaliana
ATR0048G010 Amborella trichopoda
Atru.chr3.3629 Acer truncatum
AUR62024979 Chenopodium quinoa
AUR62039639 Chenopodium quinoa
BcaB01g04667 Brassica carinata
BcaB06g28212 Brassica carinata
BcaB08g36363 Brassica carinata
BcaC02g08173 Brassica carinata
BcaC04g19726 Brassica carinata
BolC3t13741H Brassica oleracea
BolC4t23791H Brassica oleracea
BolC4t27283H Brassica oleracea
BolC9t58211H Brassica oleracea
BraA03t10420Z Brassica rapa
BraA04t17719Z Brassica rapa
BraA07t29603Z Brassica rapa
BraA10t43864Z Brassica rapa
C03p12750 Brassica napus
C04p22970 Brassica napus
C04p57650 Brassica napus
C09p53380 Brassica napus
CAN.G1001.28 Capsicum annuum
CANSAT54G0421 Cannabis sativa
CARHR121360 Cardamine hirsuta
CARHR274330 Cardamine hirsuta
Carub.0004s0935 Capsella rubella
Carub.0008s2133 Capsella rubella
Ca_01413_v3 Cicer arietinum L.
Ca_19255_v3 Cicer arietinum L.
Cc01_g11120 Coffea canephora
Cfa011317 Carpinus fangiana
Ciclev10029550m.g Citrus clementina
CiPaw.13G113100 Carya illinoinensis
CiPaw.14G080700 Carya illinoinensis
Cpa.g.sc216.7 Carica papaya
CsaV3_1G033730 Cucumis sativus L.
CSS0032457 Camellia sinensis var. sinensis
DCAR_018811 Daucus carota
Duzib150G0774 Durio zibethinus
Duzib168G0076 Durio zibethinus
Duzib170G0319 Durio zibethinus
ECA238G1730 Erigeron canadensis
ECA248G1213 Erigeron canadensis
EL10Ac9g22516 Beta vulgaris
Eucgr.B02498 Eucalyptus grandis
FAN11G0683 Fragaria x ananassa
FAN16G2914 Fragaria x ananassa
FAN21G3175 Fragaria x ananassa
FAN25G2087 Fragaria x ananassa
FvH4_3g32270 Fragaria vesca
Glyma.11G146600 Glycine max
Glyma.12G067500 Glycine max
Glyma.12G172600 Glycine max
Glyma.13G326000 Glycine max
Gohir.A03G033900 Gossypium hirsutum
Gohir.A05G103100 Gossypium hirsutum
Gohir.A08G197900 Gossypium hirsutum
Gohir.D03G134400 Gossypium hirsutum
Gohir.D05G102800 Gossypium hirsutum
Gohir.D08G215300 Gossypium hirsutum
Gorai.003G141500 Gossypium raimondii
Gorai.004G228900 Gossypium raimondii
Gorai.009G107100 Gossypium raimondii
HanXRQChr01g0016901 Helianthus annuus
Haze_23825 Corylus avellana
Hma1.2p1_0055F.1_g031560 Hydrangea macrophylla
Hma1.2p1_0058F.1_g032530 Hydrangea macrophylla
Hma1.2p1_0434F.1_g152190 Hydrangea macrophylla
Hma1.2p1_2468F.1_g322665 Hydrangea macrophylla
Lalb_Chr14g0374671 Lupinus albus
Lalb_Chr19g0137271 Lupinus albus
Lj3g0009869 Lotus japonicus
Lj3g0014252 Lotus japonicus
Lsat_1_v5_gn_1_65300 Lactuca sativa
Manes.04G021300 Manihot esculenta
Manes.11G145200 Manihot esculenta
MBI07_g19310_MAGBIO Magnolia biondii
MBI10_g13404_MAGBIO Magnolia biondii
MD03G1117800 Malus domestica
MD11G1136100 Malus domestica
Medtr2g094210 Medicago truncatula
Medtr4g059310 Medicago truncatula
MELO3C020692.2 Cucumis melo
Migut.N02604 Erythranthe guttata
MSTRG.17803 Avicennia marina
Nitab4.5_0000106g0140 Nicotiana tabacum
Nitab4.5_0000196g0120 Nicotiana tabacum
Nitab4.5_0000650g0250 Nicotiana tabacum
Nitab4.5_0012712g0010 Nicotiana tabacum
Nn2g10793 Nelumbo nucifera
Oeu001270.1 Olea europaea
Oeu002871.1 Olea europaea
Oeu030182.1 Olea europaea
Oeu059090.1 Olea europaea
Peaxi162Scf00101g00083 Petunia axillaris
Peaxi162Scf00270g00082 Petunia axillaris
PGR102G3095 Punica granatum
PGSC0003DMG400008077 Solanum tuberosum
Phvul.005G135400 Phaseolus vulgaris
Phvul.011G079200 Phaseolus vulgaris
Potri.004G211000 Populus trichocarpa
Potri.009G013800 Populus trichocarpa
Prupe.6G101500 Prunus persica
Psat5g279440 Pisum sativum
Psat7g225080 Pisum sativum
PSO063G1604 Papaver somniferum
PSO339G2100 Papaver somniferum
QL01p022229 Quercus lobata
RcHm_v2.0_Chr5g0059071 Rosa chinensis
Rhsim01G0216400 Rhododendron simsii
Rhsim01G0216600 Rhododendron simsii
RhsimUnG0058600 Rhododendron simsii
Sabra04G0142500 Salix brachista
Sabra09G0007800 Salix brachista
SalBow3G1069 Salvia bowleyana
SalBow3G4069 Salvia bowleyana
Sc15g0002200 Simmondsia chinensis
Sed0003209 Sechium edule
Sed0004216 Sechium edule
SEGI_10613 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00890 Striga asiatica
Solyc11g069420.2 Solanum lycopersicum
Sopen11g028140 Solanum pennellii
Sp4g11230 Schrenkiella parvula
Sp6g22220 Schrenkiella parvula
TAR629G0455 Trochodendron aralioides
THA.LOC104800607 Tarenaya hassleriana
THA.LOC104810857 Tarenaya hassleriana
Thecc.09G340800 Theobroma cacao
Thhalv10014945m.g Eutrema salsugineum
Thhalv10017443m.g Eutrema salsugineum
TPR.G11537 Trifolium pratense
TPR.G15560 Trifolium pratense
TWI31G0058 Tripterygium wilfordii
TWI79G1513 Tripterygium wilfordii
unitig_21.g20302 Utricularia gibba
VMungo0403G0001 Vigna mungo
VMungo1080G1182 Vigna mungo

User provided reference genes

Program Settings