Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p03360 Brassica napus
A06p03590 Brassica napus
A08p03320 Brassica napus
Aa31LG10G4020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis
Actinidia11176 Actinidia chinensis
Actinidia24396 Actinidia chinensis
Ah.01g012240 Amaranthus hybridus
AL1G57750 Arabidopsis lyrata
Aqoxy7G00425 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea
AT1G50120 Arabidopsis thaliana
ATR0605G273 Amborella trichopoda
Atru.chr10.1157 Acer truncatum
AUR62015228 Chenopodium quinoa
AUR62017692 Chenopodium quinoa
BcaB04g17271 Brassica carinata
BcaB07g33467 Brassica carinata
BcaB07g33468 Brassica carinata
BcaC08g43196 Brassica carinata
BolC3t21263H Brassica oleracea
BolC6t35627H Brassica oleracea
BraA06t23544Z Brassica rapa
BraA06t23566Z Brassica rapa
BraA08t32365Z Brassica rapa
C03p89490 Brassica napus
C06p05010 Brassica napus
C06p05100 Brassica napus
CAN.G2.11 Capsicum annuum
CANSAT25G2547 Cannabis sativa
CARHR040180 Cardamine hirsuta
Carub.0001s3927 Capsella rubella
Ca_23147_v3 Cicer arietinum L.
CBR_g8998 Chara braunii
Cc00_g04630 Coffea canephora
CDE02G2175 Ceratophyllum demersum
CDE08G0826 Ceratophyllum demersum
Cfa022165 Carpinus fangiana
Cfa022169 Carpinus fangiana
Ciclev10031151m.g Citrus clementina
CiPaw.14G015900 Carya illinoinensis
ClCG10G008350 Citrullus lanatus
ClCG10G008360 Citrullus lanatus
ClCG10G008380 Citrullus lanatus
Cpa.g.sc0.161 Carica papaya
Cpa.g.sc0.162 Carica papaya
Cre06.g258400 Chlamydomonas reinhardtii
CsaV3_4G009100 Cucumis sativus L.
CSS0021756 Camellia sinensis var. sinensis
DCAR_011423 Daucus carota
Dinv41785 Davidia involucrata
Duzib052G0538 Durio zibethinus
Duzib132G0874 Durio zibethinus
Duzib248G1520 Durio zibethinus
ECA246G0539 Erigeron canadensis
EL10Ac9g22943 Beta vulgaris
Eucgr.J00860 Eucalyptus grandis
FAN01G2992 Fragaria x ananassa
FAN03G0634 Fragaria x ananassa
FAN06G1075 Fragaria x ananassa
FAN10G2749 Fragaria x ananassa
FAN10G3814 Fragaria x ananassa
FAN11G1323 Fragaria x ananassa
FvH4_7g08600 Fragaria vesca
Glyma.03G102500 Glycine max
Glyma.07G121300 Glycine max
Gohir.A04G107700 Gossypium hirsutum
Gohir.A12G134100 Gossypium hirsutum
Gohir.D04G147500 Gossypium hirsutum
Gohir.D12G137700 Gossypium hirsutum
Gorai.008G149200 Gossypium raimondii
Gorai.012G133500 Gossypium raimondii
GSVIVG01012041001 Vitis vinifera
HanXRQChr12g0379741 Helianthus annuus
Haze_02919 Corylus avellana
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla
HPP92_002998 Vanilla planifolia
Hund24369 Selenicereus undatus
Lalb_Chr13g0290871 Lupinus albus
Lj3g0010315 Lotus japonicus
Lj7A481G48 Lonicera japonica
Lsat_1_v5_gn_5_37660 Lactuca sativa
Lsat_1_v5_gn_6_57201 Lactuca sativa
Manes.04G103500 Manihot esculenta
Manes.11G065400 Manihot esculenta
Mapoly0026s0045 Marchantia polymorpha
MBI01_g01364_MAGBIO Magnolia biondii
MCO07G406 Micromonas commoda
MD02G1226800 Malus domestica
MD07G1086800 Malus domestica
Medtr8g009530 Medicago truncatula
MELO3C018973.2 Cucumis melo
Migut.N03351 Erythranthe guttata
Nitab4.5_0000167g0100 Nicotiana tabacum
Nitab4.5_0004158g0010 Nicotiana tabacum
Nitab4.5_0004158g0020 Nicotiana tabacum
Nn3g16289 Nelumbo nucifera
Nn4g22147 Nelumbo nucifera
Oeu029992.1 Olea europaea
Oeu029993.1 Olea europaea
Oeu029994.1 Olea europaea
Oeu037755.1 Olea europaea
Os06g0618600 Oryza sativa ssp. japonica
Peaxi162Scf01013g00124 Petunia axillaris
PGSC0003DMG401027620 Solanum tuberosum
PGSC0003DMG402027620 Solanum tuberosum
Phvul.010G040700 Phaseolus vulgaris
Potri.007G071000 Populus trichocarpa
Pp3c20_6950 Physcomitrium patens
Pp3c23_19720 Physcomitrium patens
Prupe.2G113700 Prunus persica
Psat4g218760 Pisum sativum
PSO063G1783 Papaver somniferum
PSO339G1936 Papaver somniferum
PSO832G3127 Papaver somniferum
QL04p025799 Quercus lobata
RcHm_v2.0_Chr1g0343571 Rosa chinensis
Rhsim01G0150500 Rhododendron simsii
Rhsim04G0129400 Rhododendron simsii
Rhsim04G0129600 Rhododendron simsii
Rhsim06G0125400 Rhododendron simsii
Rhsim06G0125500 Rhododendron simsii
Rhsim06G0125600 Rhododendron simsii
Rhsim06G0125800 Rhododendron simsii
Sabra07G0059700 Salix brachista
SalBow7G4790 Salvia bowleyana
Sc11g0003400 Simmondsia chinensis
Sed0015165 Sechium edule
Sed0017461 Sechium edule
Sed0023875 Sechium edule
SEGI_15833 Sequoiadendron giganteum
SEGI_26710 Sequoiadendron giganteum
SEGI_29421 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10556 Striga asiatica
SHI31088 Sapria himalayana
SMO367G1304 Selaginella moellendorffii
Solyc11g019960.2 Solanum lycopersicum
Sopen11g010070 Solanum pennellii
Sp1g37000 Schrenkiella parvula
TAR369G0463 Trochodendron aralioides
THA.LOC104815215 Tarenaya hassleriana
Thecc.02G160600 Theobroma cacao
Thhalv10011376m.g Eutrema salsugineum
TPR.G17362 Trifolium pratense
TWI53G0531 Tripterygium wilfordii
TWI74G0160 Tripterygium wilfordii
unitig_44.g31559 Utricularia gibba
unitig_578.g16281 Utricularia gibba
unitig_578.g16282 Utricularia gibba
vmacro12414 Vaccinium macrocarpon
VMungo0331G0285 Vigna mungo
Zm00001eb066810 Zea mays

User provided reference genes

Program Settings