Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia18045 Actinidia chinensis
Actinidia20522 Actinidia chinensis
Ah.01g008190 Amaranthus hybridus
Ah.01g023180 Amaranthus hybridus
Ah.02g129130 Amaranthus hybridus
Aqoxy5G01114 Aquilegia oxysepala
Aqoxy6G02027 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5E9YX9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FXE6P8 Arachis hypogaea
ATR0661G123 Amborella trichopoda
Atru.chr3.902 Acer truncatum
Atru.chr5.3386 Acer truncatum
AUR62010017 Chenopodium quinoa
AUR62013007 Chenopodium quinoa
AUR62026229 Chenopodium quinoa
CAN.G588.95 Capsicum annuum
CANSAT01G2246 Cannabis sativa
CANSAT25G2378 Cannabis sativa
Ca_03300_v3 Cicer arietinum L.
Cc09_g10250 Coffea canephora
CDE02G2797 Ceratophyllum demersum
CDE09G0394 Ceratophyllum demersum
Cfa005281 Carpinus fangiana
Cfa007026 Carpinus fangiana
Ciclev10027576m.g Citrus clementina
Ciclev10030360m.g Citrus clementina
CiPaw.05G084600 Carya illinoinensis
ClCG02G012060 Citrullus lanatus
COL.COLO4_17370 Corchorus olitorius
COL.COLO4_22490 Corchorus olitorius
Cpa.g.sc20.106 Carica papaya
Cpa.g.sc6.308 Carica papaya
CsaV3_2G016220 Cucumis sativus L.
CSS0012841 Camellia sinensis var. sinensis
CSS0018003 Camellia sinensis var. sinensis
DCAR_022959 Daucus carota
Dinv14122 Davidia involucrata
Dinv40142 Davidia involucrata
Dinv41922 Davidia involucrata
Duzib132G1235 Durio zibethinus
Duzib147G1555 Durio zibethinus
Duzib248G0030 Durio zibethinus
Duzib264G0964 Durio zibethinus
ECA232G0149 Erigeron canadensis
ECA234G3651 Erigeron canadensis
EL10Ac6g13329 Beta vulgaris
EL10Ac9g21346 Beta vulgaris
Eucgr.I01453 Eucalyptus grandis
FAN15G2981 Fragaria x ananassa
FAN19G2503 Fragaria x ananassa
FAN20G0044 Fragaria x ananassa
FAN23G2355 Fragaria x ananassa
FAN24G1070 Fragaria x ananassa
FAN26G0730 Fragaria x ananassa
FAN27G1175 Fragaria x ananassa
FAN28G1417 Fragaria x ananassa
FvH4_1g11140 Fragaria vesca
FvH4_2g15580 Fragaria vesca
Glyma.10G283000 Glycine max
Glyma.20G106700 Glycine max
Gohir.A01G170100 Gossypium hirsutum
Gohir.A02G173900 Gossypium hirsutum
Gohir.D01G161200 Gossypium hirsutum
Gohir.D03G005900 Gossypium hirsutum
Gorai.002G199800 Gossypium raimondii
Gorai.003G006300 Gossypium raimondii
GSVIVG01005188001 Vitis vinifera
GSVIVG01006889001 Vitis vinifera
GSVIVG01023992001 Vitis vinifera
HanXRQChr09g0257241 Helianthus annuus
HanXRQChr10g0300811 Helianthus annuus
Haze_02112 Corylus avellana
Haze_03708 Corylus avellana
Hma1.2p1_0163F.1_g072630 Hydrangea macrophylla
Hma1.2p1_0561F.1_g178970 Hydrangea macrophylla
HPP92_020729 Vanilla planifolia
Hund06447 Selenicereus undatus
Hund14172 Selenicereus undatus
Lalb_Chr21g0307031 Lupinus albus
Lj2A484T43 Lonicera japonica
Lj5g0010360 Lotus japonicus
Lj9A397G33 Lonicera japonica
Lj9C400T3 Lonicera japonica
Lsat_1_v5_gn_4_144401 Lactuca sativa
Lsat_1_v5_gn_4_71841 Lactuca sativa
Manes.01G150500 Manihot esculenta
Manes.02G109900 Manihot esculenta
Manes.04G071400 Manihot esculenta
Manes.11G097401 Manihot esculenta
MBI05_g00176_MAGBIO Magnolia biondii
MD02G1014200 Malus domestica
MD02G1124000 Malus domestica
MD05G1124400 Malus domestica
MD10G1127200 Malus domestica
Medtr1g112850 Medicago truncatula
MELO3C020830.2 Cucumis melo
Migut.B00063 Erythranthe guttata
MSTRG.16926 Avicennia marina
MSTRG.19980 Avicennia marina
Nitab4.5_0003698g0070 Nicotiana tabacum
Nitab4.5_0004864g0010 Nicotiana tabacum
Nn5g30832 Nelumbo nucifera
Nn6g31926 Nelumbo nucifera
Oeu015556.1 Olea europaea
Oeu029648.1 Olea europaea
Os09g0542500 Oryza sativa ssp. japonica
Peaxi162Scf00362g00535 Petunia axillaris
PGR142G3087 Punica granatum
PGSC0003DMG400018042 Solanum tuberosum
Phvul.007G018200 Phaseolus vulgaris
Potri.004G177200 Populus trichocarpa
Potri.005G108400 Populus trichocarpa
Potri.009G137500 Populus trichocarpa
Prupe.5G138800 Prunus persica
Prupe.7G172100 Prunus persica
Prupe.7G174400 Prunus persica
Prupe.7G174500 Prunus persica
Prupe.8G168100 Prunus persica
Psat6g232560 Pisum sativum
PSO170G5898 Papaver somniferum
PSO210G5945 Papaver somniferum
QL06p051967 Quercus lobata
QL11p051500 Quercus lobata
RcHm_v2.0_Chr2g0098421 Rosa chinensis
RcHm_v2.0_Chr6g0278761 Rosa chinensis
Rhsim11G0193200 Rhododendron simsii
Sabra04G0119100 Salix brachista
Sabra05G0088800 Salix brachista
Sabra09G0106700 Salix brachista
SalBow1G8296 Salvia bowleyana
Sc03g0003760 Simmondsia chinensis
Sc18g0006370 Simmondsia chinensis
Sed0002256 Sechium edule
Sed0017619 Sechium edule
SEGI_17897 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20351 Striga asiatica
Solyc01g111740.3 Solanum lycopersicum
Sopen01g053780 Solanum pennellii
TAR233G0001 Trochodendron aralioides
TAR381G1494 Trochodendron aralioides
TAR381G1633 Trochodendron aralioides
THA.LOC104804321 Tarenaya hassleriana
Thecc.01G012000 Theobroma cacao
Thecc.02G056200 Theobroma cacao
TPR.G2450 Trifolium pratense
TPR.G2472 Trifolium pratense
TPR.G2490 Trifolium pratense
TWI31G0618 Tripterygium wilfordii
TWI75G0421 Tripterygium wilfordii
unitig_0.g814 Utricularia gibba
vmacro02286 Vaccinium macrocarpon
VMungo0720G1528 Vigna mungo
Zm00001eb331740 Zea mays

User provided reference genes

Program Settings