Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p21160 Brassica napus
A09p28680 Brassica napus
Aa31LG9G11590 Aethionema arabicum
Aa31LG9G60 Aethionema arabicum
Actinidia22231 Actinidia chinensis
AL3G51430 Arabidopsis lyrata
AL6G44500 Arabidopsis lyrata
Aqoxy5G04359 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PE90UA Arachis hypogaea
AT2G18196 Arabidopsis thaliana
AT4G10465 Arabidopsis thaliana
ATR0579G030 Amborella trichopoda
Atru.chr9.1830 Acer truncatum
AUR62007086 Chenopodium quinoa
AUR62019949 Chenopodium quinoa
BcaB01g01477 Brassica carinata
BcaB02g07861 Brassica carinata
BcaC04g21039 Brassica carinata
BcaC08g44591 Brassica carinata
BolC9t56477H Brassica oleracea
BraA07t29802Z Brassica rapa
C06p12650 Brassica napus
C06p20620 Brassica napus
C09p36410 Brassica napus
CAN.G1427.7 Capsicum annuum
CAN.G390.33 Capsicum annuum
CANSAT21G0292 Cannabis sativa
CARHR212460 Cardamine hirsuta
CARHR213490 Cardamine hirsuta
CARHR256180 Cardamine hirsuta
Carub.0006s2915 Capsella rubella
Carub.0008s0837 Capsella rubella
Ca_09960_v3 Cicer arietinum L.
Cc08_g17060 Coffea canephora
CDE02G3827 Ceratophyllum demersum
CDE04G0543 Ceratophyllum demersum
CDE04G2794 Ceratophyllum demersum
Cfa011886 Carpinus fangiana
Ciclev10022498m.g Citrus clementina
CiPaw.11G108600 Carya illinoinensis
CiPaw.12G074400 Carya illinoinensis
ClCG01G001310 Citrullus lanatus
COL.COLO4_10846 Corchorus olitorius
Cpa.g.sc37.110 Carica papaya
CsaV3_5G001440 Cucumis sativus L.
CSS0011979 Camellia sinensis var. sinensis
CSS0032304 Camellia sinensis var. sinensis
DCAR_006573 Daucus carota
Dinv18782 Davidia involucrata
Duzib068G0734 Durio zibethinus
Duzib205G0444 Durio zibethinus
ECA246G3260 Erigeron canadensis
EL10Ac5g12392 Beta vulgaris
Eucgr.E01094 Eucalyptus grandis
FAN04G2412 Fragaria x ananassa
FAN08G1867 Fragaria x ananassa
FAN13G3243 Fragaria x ananassa
FAN18G1562 Fragaria x ananassa
FvH4_5g10380 Fragaria vesca
Glyma.10G171800 Glycine max
Glyma.20G218500 Glycine max
Gohir.A02G095101 Gossypium hirsutum
Gohir.A08G108700 Gossypium hirsutum
Gohir.A09G187400 Gossypium hirsutum
Gohir.A12G242800 Gossypium hirsutum
Gohir.D03G088350 Gossypium hirsutum
Gohir.D08G121400 Gossypium hirsutum
Gohir.D09G182200 Gossypium hirsutum
Gohir.D12G243800 Gossypium hirsutum
Gorai.003G073500 Gossypium raimondii
Gorai.004G128100 Gossypium raimondii
Gorai.006G204300 Gossypium raimondii
Gorai.008G261300 Gossypium raimondii
GSVIVG01019700001 Vitis vinifera
HanXRQChr14g0462111 Helianthus annuus
HanXRQChr17g0534061 Helianthus annuus
Haze_09218 Corylus avellana
Hma1.2p1_0198F.1_g085225 Hydrangea macrophylla
Hma1.2p1_0456F.1_g156840 Hydrangea macrophylla
HPP92_022293 Vanilla planifolia
Lalb_Chr06g0168551 Lupinus albus
Lj2A150T33 Lonicera japonica
Lj5g0023862 Lotus japonicus
Lsat_1_v5_gn_3_13421 Lactuca sativa
Manes.01G000341 Manihot esculenta
Manes.02G000100 Manihot esculenta
Mapoly0063s0004 Marchantia polymorpha
Mapoly0177s0005 Marchantia polymorpha
MBI04_g07881_MAGBIO Magnolia biondii
MD06G1124600 Malus domestica
MD14G1141600 Malus domestica
Medtr1g078090 Medicago truncatula
MELO3C005805.2 Cucumis melo
Migut.A01061 Erythranthe guttata
Migut.E00716 Erythranthe guttata
Migut.O00934 Erythranthe guttata
MSTRG.13691 Avicennia marina
MSTRG.2039 Avicennia marina
MSTRG.24881 Avicennia marina
Nitab4.5_0000450g0070 Nicotiana tabacum
Nitab4.5_0005099g0040 Nicotiana tabacum
Nitab4.5_0006317g0040 Nicotiana tabacum
Nn1g05265 Nelumbo nucifera
Nn3g18768 Nelumbo nucifera
Oeu022024.1 Olea europaea
Os03g0120400 Oryza sativa ssp. japonica
Os10g0537400 Oryza sativa ssp. japonica
Peaxi162Scf00117g00211 Petunia axillaris
PGR042G3739 Punica granatum
PGSC0003DMG400005000 Solanum tuberosum
PGSC0003DMG400030875 Solanum tuberosum
PGSC0003DMG402030861 Solanum tuberosum
Phvul.007G117600 Phaseolus vulgaris
Potri.001G452400 Populus trichocarpa
Potri.011G149500 Populus trichocarpa
Pp3c16_19750 Physcomitrium patens
Pp3c25_11150 Physcomitrium patens
Pp3c25_14480 Physcomitrium patens
Pp3c5_25220 Physcomitrium patens
Pp3c6_1990 Physcomitrium patens
Pp3c6_4360 Physcomitrium patens
Prupe.5G135200 Prunus persica
Psat6g051760 Pisum sativum
PSO063G5114 Papaver somniferum
PSO782G0994 Papaver somniferum
QL02p027086 Quercus lobata
RcHm_v2.0_Chr7g0187841 Rosa chinensis
Rhsim02G0254800 Rhododendron simsii
Sabra16G0305600 Salix brachista
Sc22g0000100 Simmondsia chinensis
Sc22g0004650 Simmondsia chinensis
Sed0003133 Sechium edule
SEGI_12469 Sequoiadendron giganteum
SGA_v2.0_scaffold99G29532 Striga asiatica
Sopen08g024520 Solanum pennellii
Sopen12g024310 Solanum pennellii
Sp6g07000 Schrenkiella parvula
Sp7g00010 Schrenkiella parvula
TAR374G1577 Trochodendron aralioides
TAR629G3343 Trochodendron aralioides
THA.LOC104809291 Tarenaya hassleriana
THA.LOC104815464 Tarenaya hassleriana
Thecc.03G215500 Theobroma cacao
Thhalv10027957m.g Eutrema salsugineum
Thhalv10029456m.g Eutrema salsugineum
TPR.G10796 Trifolium pratense
TWI15G1113 Tripterygium wilfordii
TWI81G0277 Tripterygium wilfordii
unitig_62.g23262 Utricularia gibba
vmacro11476 Vaccinium macrocarpon
VMungo0720G1679 Vigna mungo
Zm00001eb001530 Zea mays
Zm00001eb022110 Zea mays

User provided reference genes

Program Settings