Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p48120 Brassica napus
Aa31LG4G19200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.490 Anthoceros agrestis
Actinidia23006 Actinidia chinensis
AL5G31520 Arabidopsis lyrata
Aqoxy5G01497 Aquilegia oxysepala
Aqoxy6G02390 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3TM7ML Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3WL649 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N6BS4T Arachis hypogaea
AT3G51100 Arabidopsis thaliana
Atru.chr5.3135 Acer truncatum
BcaC06g33056 Brassica carinata
BolC7t45132H Brassica oleracea
BraA03t13919Z Brassica rapa
C07p46160 Brassica napus
CANSAT11G1780 Cannabis sativa
CARHR160680 Cardamine hirsuta
CARHR160690 Cardamine hirsuta
Carub.0005s1750 Capsella rubella
Ca_19707_v3 Cicer arietinum L.
CBR_g12214 Chara braunii
CBR_g17049 Chara braunii
Cc07_g10380 Coffea canephora
Cfa005097 Carpinus fangiana
Cfa006938 Carpinus fangiana
Ciclev10029261m.g Citrus clementina
CiPaw.06G128900 Carya illinoinensis
CiPaw.07G055800 Carya illinoinensis
ClCG11G003920 Citrullus lanatus
Cpa.g.sc6.211 Carica papaya
CsaV3_2G015260 Cucumis sativus L.
CSS0007563 Camellia sinensis var. sinensis
CSS0013177 Camellia sinensis var. sinensis
DCAR_025988 Daucus carota
Dinv23461 Davidia involucrata
Dinv33599 Davidia involucrata
Dinv40055 Davidia involucrata
Duzib132G0442 Durio zibethinus
EL10As8g23856 Beta vulgaris
Eucgr.G01724 Eucalyptus grandis
FAN15G2093 Fragaria x ananassa
FAN20G3124 Fragaria x ananassa
FAN23G2664 Fragaria x ananassa
FAN24G0484 Fragaria x ananassa
FAN26G2191 Fragaria x ananassa
FAN28G0278 Fragaria x ananassa
FvH4_1g12190 Fragaria vesca
FvH4_2g10310 Fragaria vesca
Glyma.01G006900 Glycine max
Glyma.11G111600 Glycine max
Gohir.A03G198800 Gossypium hirsutum
Gohir.A11G178100 Gossypium hirsutum
Gohir.D02G220200 Gossypium hirsutum
Gohir.D11G185900 Gossypium hirsutum
Gorai.005G248100 Gossypium raimondii
Gorai.007G197500 Gossypium raimondii
GSVIVG01024183001 Vitis vinifera
HanXRQChr13g0414781 Helianthus annuus
HanXRQChr14g0441601 Helianthus annuus
Haze_03811 Corylus avellana
Hma1.2p1_0266F.1_g106940 Hydrangea macrophylla
HPP92_022282 Vanilla planifolia
HPP92_028379 Vanilla planifolia
Hund14027 Selenicereus undatus
Lalb_Chr01g0002161 Lupinus albus
Lalb_Chr19g0138931 Lupinus albus
Lj3g0002354 Lotus japonicus
Lj3g0003276 Lotus japonicus
Lj4A214G24 Lonicera japonica
Lsat_1_v5_gn_2_78361 Lactuca sativa
Lsat_1_v5_gn_8_149240 Lactuca sativa
Manes.01G142600 Manihot esculenta
Manes.02G100900 Manihot esculenta
Mapoly0074s0044 Marchantia polymorpha
MBI14_g19731_MAGBIO Magnolia biondii
MBI14_g19736_MAGBIO Magnolia biondii
MBI14_g19737_MAGBIO Magnolia biondii
MD02G1135800 Malus domestica
MD10G1064100 Malus domestica
MD15G1249400 Malus domestica
Medtr4g032740 Medicago truncatula
Medtr4g065440 Medicago truncatula
MELO3C023351.2 Cucumis melo
Migut.H02483 Erythranthe guttata
Migut.L00036 Erythranthe guttata
MSTRG.23282 Avicennia marina
Nitab4.5_0000753g0030 Nicotiana tabacum
Nitab4.5_0010830g0030 Nicotiana tabacum
Oeu021945.1 Olea europaea
Oeu037732.1 Olea europaea
Os06g0713900 Oryza sativa ssp. japonica
Os09g0530700 Oryza sativa ssp. japonica
Peaxi162Scf00010g00610 Petunia axillaris
PGR042G1893 Punica granatum
PGSC0003DMG401022539 Solanum tuberosum
PGSC0003DMG402003620 Solanum tuberosum
Phvul.011G039500 Phaseolus vulgaris
Potri.005G117400 Populus trichocarpa
Potri.007G016200 Populus trichocarpa
Pp3c14_16330 Physcomitrium patens
Pp3c1_40190 Physcomitrium patens
Pp3c26_11470 Physcomitrium patens
Pp3c3_3130 Physcomitrium patens
Prupe.7G164800 Prunus persica
Prupe.8G085800 Prunus persica
Psat7g226160 Pisum sativum
PSO170G3698 Papaver somniferum
PSO210G7387 Papaver somniferum
PSO541G2534 Papaver somniferum
PSO675G0307 Papaver somniferum
PSO675G4981 Papaver somniferum
QL03p008887 Quercus lobata
QL06p034007 Quercus lobata
QL11p046076 Quercus lobata
RcHm_v2.0_Chr2g0099951 Rosa chinensis
RcHm_v2.0_Chr6g0267511 Rosa chinensis
Rhsim08G0035500 Rhododendron simsii
Rhsim10G0214300 Rhododendron simsii
Sabra05G0096400 Salix brachista
Sabra07G0013400 Salix brachista
SalBow8G0407 Salvia bowleyana
Sc03g0003410 Simmondsia chinensis
Sed0002010 Sechium edule
Sed0017058 Sechium edule
SEGI_21342 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01246 Striga asiatica
SGA_v2.0_scaffold51G18782 Striga asiatica
SMO004G0024 Selaginella moellendorffii
SMO361G0705 Selaginella moellendorffii
Solyc02g084550.3 Solanum lycopersicum
Solyc03g033650.3 Solanum lycopersicum
Sopen02g029220 Solanum pennellii
Sopen03g006440 Solanum pennellii
Sp5g11110 Schrenkiella parvula
TAR381G0232 Trochodendron aralioides
TAR625G1395 Trochodendron aralioides
THA.LOC104821318 Tarenaya hassleriana
THA.LOC104826761 Tarenaya hassleriana
Thecc.01G023500 Theobroma cacao
Thecc.01G023700 Theobroma cacao
Thecc.02G076200 Theobroma cacao
Thhalv10010713m.g Eutrema salsugineum
TPR.G34176 Trifolium pratense
TWI75G0115 Tripterygium wilfordii
TWI79G0125 Tripterygium wilfordii
unitig_0.g2167 Utricularia gibba
vmacro21904 Vaccinium macrocarpon
vmacro22095 Vaccinium macrocarpon
VMungo1127G0458 Vigna mungo
Zm00001eb103400 Zea mays
Zm00001eb227920 Zea mays
Zm00001eb319500 Zea mays

User provided reference genes

Program Settings