Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p32050 Brassica napus
A05p02780 Brassica napus
Aa31LG10G12610 Aethionema arabicum
Aa31LG1G24060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1495 Anthoceros agrestis
Ah.13g076070 Amaranthus hybridus
AL4G40570 Arabidopsis lyrata
Aqoxy2G00062 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1ZE97X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GN7FJD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HF75RM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JW2HXV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L5I9G2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MK9Y65 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4Y9B5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YRY7W4 Arachis hypogaea
AT2G42210 Arabidopsis thaliana
AT3G57900 Arabidopsis thaliana
ATR0605G135 Amborella trichopoda
Atru.chr8.1050 Acer truncatum
AUR62012065 Chenopodium quinoa
AUR62024326 Chenopodium quinoa
BcaB06g29229 Brassica carinata
BcaC02g07257 Brassica carinata
BcaC02g12469 Brassica carinata
BcaC03g17937 Brassica carinata
BcaC04g22765 Brassica carinata
BcaNung04402 Brassica carinata
BolC4t21974H Brassica oleracea
BolC4t28455H Brassica oleracea
BraA04t18662Z Brassica rapa
BraA05t19270Z Brassica rapa
C02p59940 Brassica napus
C04p03370 Brassica napus
C04p16200 Brassica napus
C04p16220 Brassica napus
C04p69570 Brassica napus
C09p44920 Brassica napus
CAN.G1161.21 Capsicum annuum
CANSAT64G2667 Cannabis sativa
CARHR137250 Cardamine hirsuta
Carub.0004s2455 Capsella rubella
Ca_08506_v3 Cicer arietinum L.
CBR_g32607 Chara braunii
Cc00_g14600 Coffea canephora
Cc06_g22060 Coffea canephora
CDE04G2796 Ceratophyllum demersum
CDE07G0719 Ceratophyllum demersum
Ciclev10012973m.g Citrus clementina
CiPaw.09G032100 Carya illinoinensis
CiPaw.10G028000 Carya illinoinensis
ClCG10G017380 Citrullus lanatus
COL.COLO4_36134 Corchorus olitorius
Cpa.g.sc85.89 Carica papaya
CsaV3_3G039010 Cucumis sativus L.
CSS0027207 Camellia sinensis var. sinensis
CSS0048559 Camellia sinensis var. sinensis
DCAR_013558 Daucus carota
Dinv14277 Davidia involucrata
Duzib106G0699 Durio zibethinus
Duzib128G1008 Durio zibethinus
ECA247G0571 Erigeron canadensis
EL10Ac3g06947 Beta vulgaris
Eucgr.A02439 Eucalyptus grandis
FAN02G0944 Fragaria x ananassa
FAN05G2002 Fragaria x ananassa
FAN09G0554 Fragaria x ananassa
FAN14G2026 Fragaria x ananassa
FAN14G4474 Fragaria x ananassa
FvH4_6g22680 Fragaria vesca
Glyma.03G142900 Glycine max
Glyma.19G145900 Glycine max
Gohir.A01G192000 Gossypium hirsutum
Gohir.A09G126700 Gossypium hirsutum
Gohir.D01G178000 Gossypium hirsutum
Gohir.D09G123248 Gossypium hirsutum
Gorai.002G225100 Gossypium raimondii
Gorai.006G141500 Gossypium raimondii
GSVIVG01033524001 Vitis vinifera
HanXRQChr10g0295691 Helianthus annuus
HanXRQChr15g0491311 Helianthus annuus
Haze_19962 Corylus avellana
Hma1.2p1_0005F.1_g004310 Hydrangea macrophylla
HPP92_001833 Vanilla planifolia
Hund19190 Selenicereus undatus
Hund19191 Selenicereus undatus
Lalb_Chr04g0259631 Lupinus albus
Lalb_Chr18g0047741 Lupinus albus
Lju124A30G9 Lonicera japonica
Lsat_1_v5_gn_9_28001 Lactuca sativa
Manes.08G045000 Manihot esculenta
Manes.09G032100 Manihot esculenta
Mapoly0011s0060 Marchantia polymorpha
MBI04_g27127_MAGBIO Magnolia biondii
MD12G1061000 Malus domestica
MD14G1060700 Malus domestica
MELO3C009644.2 Cucumis melo
Migut.J01816 Erythranthe guttata
MSTRG.19893 Avicennia marina
Nitab4.5_0000991g0030 Nicotiana tabacum
Nitab4.5_0001538g0070 Nicotiana tabacum
Nn1g07333 Nelumbo nucifera
Nn7g36049 Nelumbo nucifera
Oeu008114.1 Olea europaea
Oeu033746.1 Olea europaea
Os02g0717300 Oryza sativa ssp. japonica
Os09g0279300 Oryza sativa ssp. japonica
Peaxi162Scf00003g04210 Petunia axillaris
PGR142G2650 Punica granatum
PGSC0003DMG400011432 Solanum tuberosum
Phvul.001G140800 Phaseolus vulgaris
Potri.006G059300 Populus trichocarpa
Pp3c5_22310 Physcomitrium patens
Pp3c6_9862 Physcomitrium patens
Prupe.7G073800 Prunus persica
Psat3g069720 Pisum sativum
PSO063G6118 Papaver somniferum
PSO339G6088 Papaver somniferum
PSO384G3106 Papaver somniferum
QL07p023149 Quercus lobata
RcHm_v2.0_Chr3g0480261 Rosa chinensis
Rhsim03G0009100 Rhododendron simsii
Sabra06G0042700 Salix brachista
SalBow6G0397 Salvia bowleyana
Sc13g0002130 Simmondsia chinensis
Sed0004669 Sechium edule
Sed0015240 Sechium edule
SEGI_22128 Sequoiadendron giganteum
SGA_v2.0_scaffold69G23079 Striga asiatica
SMO116G0085 Selaginella moellendorffii
Solyc10g078690.3 Solanum lycopersicum
Sopen10g029310 Solanum pennellii
Sp4g24390 Schrenkiella parvula
Sp5g04820 Schrenkiella parvula
TAR623G0239 Trochodendron aralioides
TAR633G1605 Trochodendron aralioides
TAR633G2476 Trochodendron aralioides
THA.LOC104802456 Tarenaya hassleriana
THA.LOC104824464 Tarenaya hassleriana
THA.LOC104824466 Tarenaya hassleriana
Thecc.05G168500 Theobroma cacao
Thhalv10006285m.g Eutrema salsugineum
Thhalv10017352m.g Eutrema salsugineum
TPR.G13232 Trifolium pratense
TPR.G284 Trifolium pratense
TWI53G0547 Tripterygium wilfordii
TWI77G0677 Tripterygium wilfordii
unitig_26.g9039 Utricularia gibba
unitig_749.g14140 Utricularia gibba
vmacro07935 Vaccinium macrocarpon
VMungo1383G0120 Vigna mungo
Zm00001eb252780 Zea mays
Zm00001eb308440 Zea mays

User provided reference genes

Program Settings