Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p59450 Brassica napus
Aa31LG2G20470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.484 Anthoceros agrestis
Actinidia10304 Actinidia chinensis
Actinidia30424 Actinidia chinensis
Actinidia30754 Actinidia chinensis
Actinidia33149 Actinidia chinensis
Ah.08g212920 Amaranthus hybridus
AL3G52810 Arabidopsis lyrata
AL7G22100 Arabidopsis lyrata
Aqoxy6G00581 Aquilegia oxysepala
Aqoxy6G00811 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5SJ4SU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BEB4AA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IL79Z4 Arachis hypogaea
AT2G19120 Arabidopsis thaliana
AT4G30100 Arabidopsis thaliana
ATR0068G028 Amborella trichopoda
ATR0068G035 Amborella trichopoda
ATR0564G361 Amborella trichopoda
ATR0739G098 Amborella trichopoda
Atru.chr13.1255 Acer truncatum
AUR62018362 Chenopodium quinoa
AUR62030301 Chenopodium quinoa
BcaNung00518 Brassica carinata
BolC7t46217H Brassica oleracea
BraA03t15001Z Brassica rapa
C07p57500 Brassica napus
CAN.G517.9 Capsicum annuum
CANSAT25G0411 Cannabis sativa
CARHR109630 Cardamine hirsuta
CARHR238010 Cardamine hirsuta
Carub.0003s3335 Capsella rubella
Carub.0007s1050 Capsella rubella
Ca_23369_v3 Cicer arietinum L.
Cc10_g07500 Coffea canephora
CDE10G0938 Ceratophyllum demersum
CDE10G0995 Ceratophyllum demersum
CDE10G1034 Ceratophyllum demersum
Cfa015917 Carpinus fangiana
Ciclev10030523m.g Citrus clementina
CiPaw.06G021000 Carya illinoinensis
CiPaw.06G021100 Carya illinoinensis
ClCG11G015400 Citrullus lanatus
COL.COLO4_16446 Corchorus olitorius
Cpa.g.sc66.83 Carica papaya
Cre03.g187950 Chlamydomonas reinhardtii
CsaV3_4G028690 Cucumis sativus L.
CSS0013381 Camellia sinensis var. sinensis
CSS0018464 Camellia sinensis var. sinensis
DCAR_001037 Daucus carota
Dinv07790 Davidia involucrata
Dinv07791 Davidia involucrata
Dinv13036 Davidia involucrata
Dinv44753 Davidia involucrata
Duzib093G0224 Durio zibethinus
Duzib116G0930 Durio zibethinus
ECA246G3036 Erigeron canadensis
ECA247G2930 Erigeron canadensis
EL10Ac4g08219 Beta vulgaris
Eucgr.E01930 Eucalyptus grandis
Eucgr.E02072 Eucalyptus grandis
FAN04G2787 Fragaria x ananassa
FAN08G1634 Fragaria x ananassa
FAN13G2300 Fragaria x ananassa
FAN18G4400 Fragaria x ananassa
FvH4_5g37860 Fragaria vesca
Glyma.07G037400 Glycine max
Glyma.16G006800 Glycine max
Gohir.A05G228600 Gossypium hirsutum
Gohir.A05G267700 Gossypium hirsutum
Gohir.D05G231000 Gossypium hirsutum
Gohir.D05G269500 Gossypium hirsutum
Gorai.009G239200 Gossypium raimondii
Gorai.009G282100 Gossypium raimondii
GSVIVG01009001001 Vitis vinifera
HanXRQChr02g0044691 Helianthus annuus
HanXRQChr04g0112991 Helianthus annuus
HanXRQChr05g0162191 Helianthus annuus
Haze_00578 Corylus avellana
Hma1.2p1_0120F.1_g057180 Hydrangea macrophylla
HPP92_006003 Vanilla planifolia
Hund26656 Selenicereus undatus
Lalb_Chr25g0281191 Lupinus albus
Lj3g0012997 Lotus japonicus
Lj4A107T49 Lonicera japonica
Lj4A716T76 Lonicera japonica
Lj4A719T62 Lonicera japonica
Lsat_1_v5_gn_1_4241 Lactuca sativa
Lsat_1_v5_gn_6_102281 Lactuca sativa
Manes.03G203500 Manihot esculenta
Manes.12G040200 Manihot esculenta
Mapoly0003s0124 Marchantia polymorpha
MBI05_g34465_MAGBIO Magnolia biondii
MCO13G460 Micromonas commoda
MD08G1179700 Malus domestica
MD15G1364900 Malus domestica
Medtr8g020390 Medicago truncatula
MELO3C010422.2 Cucumis melo
Migut.C00228 Erythranthe guttata
Migut.C00230 Erythranthe guttata
Migut.O00725 Erythranthe guttata
Migut.O00753 Erythranthe guttata
MSTRG.24962 Avicennia marina
Nitab4.5_0000469g0120 Nicotiana tabacum
Nitab4.5_0003496g0050 Nicotiana tabacum
Nn1g05298 Nelumbo nucifera
Nn2g15618 Nelumbo nucifera
Nn5g29054 Nelumbo nucifera
Oeu024550.1 Olea europaea
Oeu061481.1 Olea europaea
Os10g0118900 Oryza sativa ssp. japonica
Peaxi162Scf00041g00212 Petunia axillaris
Peaxi162Scf00041g00215 Petunia axillaris
PGSC0003DMG400009483 Solanum tuberosum
Phvul.010G130800 Phaseolus vulgaris
Potri.002G093500 Populus trichocarpa
Potri.005G168300 Populus trichocarpa
Pp3c19_7860 Physcomitrium patens
PRCOL_00001795 Prasinoderma coloniale
Prupe.1G513000 Prunus persica
Psat0s3791g0120 Pisum sativum
Psat4g183080 Pisum sativum
PSO133G0009 Papaver somniferum
PSO541G2134 Papaver somniferum
QL12p036114 Quercus lobata
RcHm_v2.0_Chr7g0239841 Rosa chinensis
Rhsim08G0249100 Rhododendron simsii
Sabra02G0073800 Salix brachista
Sabra05G0126300 Salix brachista
Sc14g0007270 Simmondsia chinensis
Sed0015371 Sechium edule
Sed0019055 Sechium edule
SEGI_13100 Sequoiadendron giganteum
SGA_v2.0_scaffold267G46182 Striga asiatica
SHI09407 Sapria himalayana
Solyc04g072830.4 Solanum lycopersicum
Solyc04g072840.3 Solanum lycopersicum
Sopen04g028990 Solanum pennellii
Sp7g27950 Schrenkiella parvula
TAR376G1048 Trochodendron aralioides
TAR381G0054 Trochodendron aralioides
THA.LOC104814664 Tarenaya hassleriana
Thecc.08G110700 Theobroma cacao
Thhalv10024227m.g Eutrema salsugineum
TPR.G32505 Trifolium pratense
TWI34G0328 Tripterygium wilfordii
unitig_26.g9870 Utricularia gibba
unitig_26.g9871 Utricularia gibba
unitig_46.g18000 Utricularia gibba
vmacro04758 Vaccinium macrocarpon
VMungo0331G0331 Vigna mungo
Zm00001eb026030 Zea mays
Zm00001eb224450 Zea mays

User provided reference genes

Program Settings