Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p26260 Brassica napus
A05p11370 Brassica napus
Aa31LG9G14020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1647 Anthoceros agrestis
Actinidia09820 Actinidia chinensis
Actinidia28754 Actinidia chinensis
Ah.09g236950 Amaranthus hybridus
AL4G30210 Arabidopsis lyrata
Aqoxy6G02991 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AK1NBZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BE8FK9 Arachis hypogaea
AT2G34260 Arabidopsis thaliana
ATR0231G001 Amborella trichopoda
ATR0680G041 Amborella trichopoda
Atru.chr5.1742 Acer truncatum
AUR62012542 Chenopodium quinoa
AUR62014654 Chenopodium quinoa
AUR62044118 Chenopodium quinoa
BcaB02g09562 Brassica carinata
BcaB06g28745 Brassica carinata
BcaC02g11487 Brassica carinata
BolC4t23059H Brassica oleracea
BolC4t27833H Brassica oleracea
BraA04t18130Z Brassica rapa
BraA05t20086Z Brassica rapa
C04p14860 Brassica napus
C04p63650 Brassica napus
CANSAT54G2063 Cannabis sativa
CARHR128360 Cardamine hirsuta
Carub.0004s1593 Capsella rubella
Ca_02533_v3 Cicer arietinum L.
CBR_g37537 Chara braunii
Cc07_g12190 Coffea canephora
Cc11_g01130 Coffea canephora
Cc11_g01140 Coffea canephora
CDE02G0197 Ceratophyllum demersum
CDE08G0085 Ceratophyllum demersum
Cfa006688 Carpinus fangiana
CiPaw.03G094400 Carya illinoinensis
ClCG10G013460 Citrullus lanatus
COL.COLO4_35713 Corchorus olitorius
COL.COLO4_38041 Corchorus olitorius
Cpa.g.sc365.7 Carica papaya
Cre02.g113250 Chlamydomonas reinhardtii
CsaV3_3G043180 Cucumis sativus L.
CSS0049016 Camellia sinensis var. sinensis
DCAR_019301 Daucus carota
Dinv40217 Davidia involucrata
Duzib264G0649 Durio zibethinus
ECA233G4977 Erigeron canadensis
EL10Ac3g07307 Beta vulgaris
EL10Ac8g19950 Beta vulgaris
Eucgr.H00074 Eucalyptus grandis
FAN02G2069 Fragaria x ananassa
FAN09G1063 Fragaria x ananassa
FAN14G1715 Fragaria x ananassa
FvH4_6g22900 Fragaria vesca
Glyma.10G129800 Glycine max
Glyma.11G099900 Glycine max
Glyma.12G025800 Glycine max
Glyma.20G080900 Glycine max
Gohir.A05G385700 Gossypium hirsutum
Gohir.D04G022900 Gossypium hirsutum
Gorai.012G034000 Gossypium raimondii
GSVIVG01017458001 Vitis vinifera
GSVIVG01020113001 Vitis vinifera
GSVIVG01020926001 Vitis vinifera
HanXRQChr15g0489741 Helianthus annuus
Haze_03669 Corylus avellana
Hma1.2p1_0085F.1_g044390 Hydrangea macrophylla
HPP92_003941 Vanilla planifolia
Hund21306 Selenicereus undatus
Lalb_Chr05g0214971 Lupinus albus
Lalb_Chr09g0324851 Lupinus albus
Lj1g0021179 Lotus japonicus
Lj3A907T66 Lonicera japonica
Lj4C240T4 Lonicera japonica
Lsat_1_v5_gn_6_103760 Lactuca sativa
Lsat_1_v5_gn_8_114040 Lactuca sativa
Manes.02G116500 Manihot esculenta
Mapoly0040s0029 Marchantia polymorpha
MCO07G146 Micromonas commoda
MD12G1063000 Malus domestica
MD14G1063600 Malus domestica
Medtr1g076780 Medicago truncatula
Medtr4g077783 Medicago truncatula
Medtr4g111810 Medicago truncatula
MELO3C026614.2 Cucumis melo
Migut.B00408 Erythranthe guttata
MSTRG.16702 Avicennia marina
Nitab4.5_0000235g0120 Nicotiana tabacum
Nitab4.5_0006401g0010 Nicotiana tabacum
Nn6g31627 Nelumbo nucifera
Oeu010411.1 Olea europaea
Oeu036465.1 Olea europaea
Os07g0660700 Oryza sativa ssp. japonica
Peaxi162Scf00431g00415 Petunia axillaris
PGR102G1152 Punica granatum
PGSC0003DMG400003462 Solanum tuberosum
Phvul.005G015600 Phaseolus vulgaris
Phvul.005G015700 Phaseolus vulgaris
Phvul.011G028300 Phaseolus vulgaris
Phvul.011G028400 Phaseolus vulgaris
Phvul.011G028501 Phaseolus vulgaris
Potri.004G095000 Populus trichocarpa
Potri.017G120100 Populus trichocarpa
Pp3c5_17020 Physcomitrium patens
PRCOL_00000722 Prasinoderma coloniale
Prupe.7G070600 Prunus persica
Psat1g185000 Pisum sativum
Psat1g210160 Pisum sativum
Psat6g227720 Pisum sativum
Psat6g227760 Pisum sativum
PSO017G2362 Papaver somniferum
PSO170G0853 Papaver somniferum
QL07p001807 Quercus lobata
QL10p048860 Quercus lobata
RcHm_v2.0_Chr3g0480691 Rosa chinensis
RcHm_v2.0_Chr4g0410631 Rosa chinensis
RcHm_v2.0_Chr5g0032061 Rosa chinensis
Rhsim08G0026000 Rhododendron simsii
Sabra17G0099100 Salix brachista
Sabra17G0099200 Salix brachista
SalBow2G0232 Salvia bowleyana
SalBow6G2358 Salvia bowleyana
SalBow6G5765 Salvia bowleyana
Sc03g0004110 Simmondsia chinensis
Sed0012135 Sechium edule
Sed0020265 Sechium edule
SEGI_20710 Sequoiadendron giganteum
SEGI_27353 Sequoiadendron giganteum
SEGI_28078 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30887 Striga asiatica
SHI13610 Sapria himalayana
SMO364G0336 Selaginella moellendorffii
Solyc02g038750.3 Solanum lycopersicum
Sopen02g012180 Solanum pennellii
Sp4g16550 Schrenkiella parvula
TAR381G0314 Trochodendron aralioides
TAR625G0043 Trochodendron aralioides
TAR625G0966 Trochodendron aralioides
THA.LOC104816808 Tarenaya hassleriana
THA.LOC104820618 Tarenaya hassleriana
Thecc.01G130700 Theobroma cacao
Thhalv10016919m.g Eutrema salsugineum
TPR.G18695 Trifolium pratense
TPR.G26773 Trifolium pratense
TPR.G40432 Trifolium pratense
TWI73G0530 Tripterygium wilfordii
unitig_61.g26025 Utricularia gibba
vmacro07517 Vaccinium macrocarpon
vmacro18476 Vaccinium macrocarpon
VMungo1127G0990 Vigna mungo
Zm00001eb349300 Zea mays

User provided reference genes

Program Settings