Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p29940 Brassica napus
A09p08190 Brassica napus
Aa31LG1G18760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3470 Anthoceros agrestis
Actinidia03029 Actinidia chinensis
Actinidia38250 Actinidia chinensis
Ah.10g033030 Amaranthus hybridus
AL8G40300 Arabidopsis lyrata
Aqoxy2G00791 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.32M4WS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3U687E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I3EVQT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TH86UG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UD3ZER Arachis hypogaea
AT5G63220 Arabidopsis thaliana
ATR0661G308 Amborella trichopoda
Atru.chr12.635 Acer truncatum
AUR62020788 Chenopodium quinoa
AUR62043639 Chenopodium quinoa
BcaC01g02566 Brassica carinata
BolC3t18594H Brassica oleracea
BolC9t53837H Brassica oleracea
BraA06t25945Z Brassica rapa
BraA09t36470Z Brassica rapa
C03p63420 Brassica napus
C09p09240 Brassica napus
CAN.G50.13 Capsicum annuum
CAN.G8.39 Capsicum annuum
CAN.G95.7 Capsicum annuum
CANSAT56G2462 Cannabis sativa
CARHR277070 Cardamine hirsuta
Carub.0008s2397 Capsella rubella
Ca_10595_v3 Cicer arietinum L.
CBR_g49532 Chara braunii
Cc03_g16280 Coffea canephora
CDE04G1653 Ceratophyllum demersum
CDE07G0668 Ceratophyllum demersum
CDE07G1914 Ceratophyllum demersum
Cfa001259 Carpinus fangiana
Cfa019630 Carpinus fangiana
Ciclev10032131m.g Citrus clementina
CiPaw.15G145000 Carya illinoinensis
ClCG06G002910 Citrullus lanatus
Cpa.g.sc53.21 Carica papaya
Cre06.g282950 Chlamydomonas reinhardtii
CsaV3_6G009040 Cucumis sativus L.
CSS0008535 Camellia sinensis var. sinensis
CSS0042102 Camellia sinensis var. sinensis
CSS0050516 Camellia sinensis var. sinensis
DCAR_006464 Daucus carota
Dinv04679 Davidia involucrata
Dinv07587 Davidia involucrata
Dinv11807 Davidia involucrata
Dinv31344 Davidia involucrata
Duzib106G1564 Durio zibethinus
Duzib114G0670 Durio zibethinus
ECA247G2135 Erigeron canadensis
Eucgr.G02801 Eucalyptus grandis
FAN01G1284 Fragaria x ananassa
FAN03G0794 Fragaria x ananassa
FAN06G0847 Fragaria x ananassa
FAN10G1203 Fragaria x ananassa
FvH4_7g20140 Fragaria vesca
Glyma.10G214100 Glycine max
Glyma.20G177500 Glycine max
Gohir.A02G086400 Gossypium hirsutum
Gohir.A05G344400 Gossypium hirsutum
Gohir.A13G021600 Gossypium hirsutum
Gohir.D04G082900 Gossypium hirsutum
Gohir.D05G316201 Gossypium hirsutum
Gohir.D13G022200 Gossypium hirsutum
Gorai.009G338200 Gossypium raimondii
Gorai.012G093600 Gossypium raimondii
Gorai.013G025000 Gossypium raimondii
GSVIVG01016338001 Vitis vinifera
HanXRQChr07g0195941 Helianthus annuus
HanXRQChr14g0453411 Helianthus annuus
Haze_18894 Corylus avellana
Hma1.2p1_0904F.1_g235240 Hydrangea macrophylla
Hma1.2p1_0904F.1_g235250 Hydrangea macrophylla
HPP92_021827 Vanilla planifolia
Hund19333 Selenicereus undatus
Hund22480 Selenicereus undatus
Lalb_Chr01g0010171 Lupinus albus
Lalb_Chr03g0043421 Lupinus albus
Lalb_Chr21g0305871 Lupinus albus
Lj5g0001210 Lotus japonicus
Lj8C95T3 Lonicera japonica
Lsat_1_v5_gn_2_110160 Lactuca sativa
Manes.07G102100 Manihot esculenta
Mapoly0019s0063 Marchantia polymorpha
MD01G1131100 Malus domestica
MD07G1179200 Malus domestica
Medtr1g095910 Medicago truncatula
MELO3C022239.2 Cucumis melo
Migut.M00004 Erythranthe guttata
MSTRG.6667 Avicennia marina
Nitab4.5_0000219g0050 Nicotiana tabacum
Nitab4.5_0000348g0090 Nicotiana tabacum
Nitab4.5_0001070g0040 Nicotiana tabacum
Nitab4.5_0005353g0020 Nicotiana tabacum
Nn2g10994 Nelumbo nucifera
Oeu050294.2 Olea europaea
Oeu061895.3 Olea europaea
Os01g0164700 Oryza sativa ssp. japonica
Peaxi162Scf00057g00154 Petunia axillaris
Peaxi162Scf01205g00165 Petunia axillaris
PGR142G2805 Punica granatum
PGSC0003DMG400002241 Solanum tuberosum
PGSC0003DMG400007657 Solanum tuberosum
Phvul.007G091600 Phaseolus vulgaris
Potri.008G044100 Populus trichocarpa
Potri.010G217400 Populus trichocarpa
Pp3c11_21230 Physcomitrium patens
Pp3c3_660 Physcomitrium patens
Pp3c7_26290 Physcomitrium patens
Pp3c7_4410 Physcomitrium patens
Pp3c7_7450 Physcomitrium patens
Pp3c9_19760 Physcomitrium patens
Prupe.2G218300 Prunus persica
Psat6g186040 Pisum sativum
PSO349G0185 Papaver somniferum
PSO765G0019 Papaver somniferum
QL08p056836 Quercus lobata
RcHm_v2.0_Chr1g0364111 Rosa chinensis
RcHm_v2.0_Chr2g0153331 Rosa chinensis
RcHm_v2.0_Chr5g0038701 Rosa chinensis
RcHm_v2.0_Chr7g0225301 Rosa chinensis
Rhsim03G0122800 Rhododendron simsii
Sabra08G0030500 Salix brachista
Sabra10G0168100 Salix brachista
SalBow8G2974 Salvia bowleyana
Sc09g0006780 Simmondsia chinensis
Sed0011372 Sechium edule
SEGI_20090 Sequoiadendron giganteum
SEGI_31020 Sequoiadendron giganteum
SMO116G0436 Selaginella moellendorffii
Solyc08g015990.4 Solanum lycopersicum
Solyc12g017820.2 Solanum lycopersicum
Sopen08g006240 Solanum pennellii
Sopen12g008620 Solanum pennellii
Sp2g26340 Schrenkiella parvula
TAR633G1364 Trochodendron aralioides
TAR636G2780 Trochodendron aralioides
THA.LOC104799349 Tarenaya hassleriana
THA.LOC104827325 Tarenaya hassleriana
Thecc.10G067900 Theobroma cacao
Thhalv10004594m.g Eutrema salsugineum
TPR.G1830 Trifolium pratense
TWI63G1195 Tripterygium wilfordii
vmacro07089 Vaccinium macrocarpon
VMungo0720G0718 Vigna mungo
Zm00001eb123410 Zea mays
Zm00001eb336250 Zea mays

User provided reference genes

Program Settings