Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p39530 Brassica napus
Aa31LG3G1960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1965 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1966 Anthoceros agrestis
Actinidia05302 Actinidia chinensis
Actinidia13133 Actinidia chinensis
Actinidia13134 Actinidia chinensis
Ah.12g062350 Amaranthus hybridus
AL3G20650 Arabidopsis lyrata
Aqoxy2G02037 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LM62V2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QN2KEZ Arachis hypogaea
AT3G09470 Arabidopsis thaliana
ATR0559G335 Amborella trichopoda
ATR0559G352 Amborella trichopoda
Atru.chr8.1947 Acer truncatum
AUR62041035 Chenopodium quinoa
AUR62041759 Chenopodium quinoa
BcaC05g29675 Brassica carinata
BcaC05g29677 Brassica carinata
BolC5t34506H Brassica oleracea
BraA05t22734Z Brassica rapa
C05p58560 Brassica napus
CAN.G97.10 Capsicum annuum
CANSAT35G0217 Cannabis sativa
CARHR083880 Cardamine hirsuta
CARHR083890 Cardamine hirsuta
Carub.0003s0857 Capsella rubella
Ca_08782_v3 Cicer arietinum L.
Cc06_g02890 Coffea canephora
CDE07G1313 Ceratophyllum demersum
Cfa017420 Carpinus fangiana
Ciclev10011745m.g Citrus clementina
CiPaw.09G189500 Carya illinoinensis
ClCG00G003200 Citrullus lanatus
ClCG10G020980 Citrullus lanatus
COL.COLO4_14849 Corchorus olitorius
CsaV3_3G035030 Cucumis sativus L.
CSS0002297 Camellia sinensis var. sinensis
CSS0014030 Camellia sinensis var. sinensis
CSS0017297 Camellia sinensis var. sinensis
CSS0019310 Camellia sinensis var. sinensis
CSS0035971 Camellia sinensis var. sinensis
CSS0044683 Camellia sinensis var. sinensis
DCAR_009246 Daucus carota
Dinv35628 Davidia involucrata
Dinv37200 Davidia involucrata
Duzib093G1847 Durio zibethinus
ECA238G4795 Erigeron canadensis
EL10As1g23100 Beta vulgaris
Eucgr.K03155 Eucalyptus grandis
FAN02G0854 Fragaria x ananassa
FAN05G4892 Fragaria x ananassa
FAN09G0883 Fragaria x ananassa
FAN09G1438 Fragaria x ananassa
FAN09G1880 Fragaria x ananassa
FAN14G0919 Fragaria x ananassa
FvH4_6g14211 Fragaria vesca
FvH4_6g14220 Fragaria vesca
Glyma.03G172100 Glycine max
Glyma.19G173000 Glycine max
Gohir.A09G158000 Gossypium hirsutum
Gohir.D04G119800 Gossypium hirsutum
Gohir.D09G153300 Gossypium hirsutum
Gorai.006G174800 Gossypium raimondii
GSVIVG01025523001 Vitis vinifera
HanXRQChr07g0196201 Helianthus annuus
Haze_20750 Corylus avellana
Hma1.2p1_1065F.1_g253710 Hydrangea macrophylla
Hma1.2p1_1481F.1_g286150 Hydrangea macrophylla
Hma1.2p1_1707F.1_g298500 Hydrangea macrophylla
HPP92_018052 Vanilla planifolia
HPP92_018059 Vanilla planifolia
Hund10629 Selenicereus undatus
Lalb_Chr01g0019241 Lupinus albus
Lalb_Chr20g0113251 Lupinus albus
Lj1g0000746 Lotus japonicus
Lj1g0014450 Lotus japonicus
Lj1g0019565 Lotus japonicus
Lj2A2G29 Lonicera japonica
Lj2A99T56 Lonicera japonica
Lsat_1_v5_gn_2_111601 Lactuca sativa
Lsat_1_v5_gn_2_4320 Lactuca sativa
Lsat_1_v5_gn_7_25540 Lactuca sativa
Manes.09G087100 Manihot esculenta
Mapoly0174s0006 Marchantia polymorpha
Mapoly0179s0003 Marchantia polymorpha
MBI14_g24315_MAGBIO Magnolia biondii
MD04G1123300 Malus domestica
MD04G1123400 Malus domestica
MD12G1139100 Malus domestica
MD12G1139200 Malus domestica
MD12G1139300 Malus domestica
Medtr7g099870 Medicago truncatula
Medtr7g099890 Medicago truncatula
Medtr7g099910 Medicago truncatula
MELO3C009272.2 Cucumis melo
Migut.J00351 Erythranthe guttata
Migut.O00944 Erythranthe guttata
MSTRG.5681 Avicennia marina
Nitab4.5_0002077g0040 Nicotiana tabacum
Nitab4.5_0003267g0040 Nicotiana tabacum
Nn2g10428 Nelumbo nucifera
Oeu036166.1 Olea europaea
Oeu036169.1 Olea europaea
Oeu060049.1 Olea europaea
Os12g0566800 Oryza sativa ssp. japonica
Os12g0566900 Oryza sativa ssp. japonica
Os12g0567000 Oryza sativa ssp. japonica
Peaxi162Scf00039g01233 Petunia axillaris
PGR004G0312 Punica granatum
PGR004G0538 Punica granatum
PGSC0003DMG400008924 Solanum tuberosum
Phvul.001G169800 Phaseolus vulgaris
Potri.006G083700 Populus trichocarpa
Pp3c8_1230 Physcomitrium patens
Prupe.6G251000 Prunus persica
Prupe.6G251100 Prunus persica
Psat3g049040 Pisum sativum
Psat3g049200 Pisum sativum
Psat3g053880 Pisum sativum
PSO339G4978 Papaver somniferum
PSO339G5613 Papaver somniferum
PSO339G5853 Papaver somniferum
PSO648G0053 Papaver somniferum
QL05p010709 Quercus lobata
QL07p047480 Quercus lobata
RcHm_v2.0_Chr3g0467171 Rosa chinensis
RcHm_v2.0_Chr3g0467181 Rosa chinensis
Rhsim04G0155900 Rhododendron simsii
Sabra06G0063300 Salix brachista
SalBow3G2787 Salvia bowleyana
Sc20g0004960 Simmondsia chinensis
Sed0005778 Sechium edule
Sed0018380 Sechium edule
SEGI_05360 Sequoiadendron giganteum
SGA_v2.0_scaffold126G33811 Striga asiatica
SMO197G0098 Selaginella moellendorffii
Solyc09g010470.3 Solanum lycopersicum
Sopen09g005210 Solanum pennellii
Sp3g07840 Schrenkiella parvula
TAR633G2154 Trochodendron aralioides
TAR636G1555 Trochodendron aralioides
THA.LOC104816289 Tarenaya hassleriana
THA.LOC104823252 Tarenaya hassleriana
Thecc.05G043700 Theobroma cacao
Thhalv10020764m.g Eutrema salsugineum
TPR.G21468 Trifolium pratense
TPR.G21472 Trifolium pratense
TWI74G1177 Tripterygium wilfordii
unitig_578.g15699 Utricularia gibba
vmacro08662 Vaccinium macrocarpon
VMungo1383G3275 Vigna mungo
Zm00001eb028780 Zea mays

User provided reference genes

Program Settings