Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p07790 Brassica napus
Aa31LG6G9740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4417 Anthoceros agrestis
Actinidia10651 Actinidia chinensis
Actinidia10653 Actinidia chinensis
Actinidia13988 Actinidia chinensis
Actinidia17798 Actinidia chinensis
Ah.05g167860 Amaranthus hybridus
AL1G51810 Arabidopsis lyrata
Aqoxy5G02106 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LT68UB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RZZD7S Arachis hypogaea
AT1G43690 Arabidopsis thaliana
ATR0772G018 Amborella trichopoda
ATR0772G093 Amborella trichopoda
Atru.chr13.2155 Acer truncatum
AUR62013572 Chenopodium quinoa
AUR62026717 Chenopodium quinoa
BcaB07g33979 Brassica carinata
BcaC08g42816 Brassica carinata
BraSC36t46025Z Brassica rapa
C06p00280 Brassica napus
CAN.G268.7 Capsicum annuum
CAN.G309.90 Capsicum annuum
CANSAT25G0539 Cannabis sativa
CARHR035580 Cardamine hirsuta
Carub.0001s3471 Capsella rubella
Ca_11944_v3 Cicer arietinum L.
Ca_19935_v3 Cicer arietinum L.
Ca_25987_v3 Cicer arietinum L.
Ca_25988_v3 Cicer arietinum L.
Ca_26438_v3 Cicer arietinum L.
Ca_27140_v3 Cicer arietinum L.
CBR_g11170 Chara braunii
Cc10_g14730 Coffea canephora
CDE06G2375 Ceratophyllum demersum
CDE08G0143 Ceratophyllum demersum
Cfa018329 Carpinus fangiana
Ciclev10000573m.g Citrus clementina
CiPaw.15G016900 Carya illinoinensis
CiPaw.16G013500 Carya illinoinensis
ClCG09G009620 Citrullus lanatus
COL.COLO4_37837 Corchorus olitorius
Cpa.g.sc21.190 Carica papaya
Cpa.g.sc21.191 Carica papaya
Cre06.g286600 Chlamydomonas reinhardtii
CsaV3_7G025180 Cucumis sativus L.
CSS0021208 Camellia sinensis var. sinensis
CSS0049856 Camellia sinensis var. sinensis
DCAR_001131 Daucus carota
Dinv25852 Davidia involucrata
Dinv41092 Davidia involucrata
Duzib041G0148 Durio zibethinus
Duzib093G0980 Durio zibethinus
Duzib116G0661 Durio zibethinus
ECA246G4589 Erigeron canadensis
EL10Ac1g01533 Beta vulgaris
Eucgr.F04241 Eucalyptus grandis
FAN15G2444 Fragaria x ananassa
FAN20G2258 Fragaria x ananassa
FAN24G2048 Fragaria x ananassa
FAN27G2333 Fragaria x ananassa
FvH4_2g13910 Fragaria vesca
Glyma.10G225500 Glycine max
Glyma.20G166300 Glycine max
Gohir.A05G242900 Gossypium hirsutum
Gohir.A05G270100 Gossypium hirsutum
Gohir.D05G244400 Gossypium hirsutum
Gohir.D05G272200 Gossypium hirsutum
Gorai.009G253500 Gossypium raimondii
Gorai.009G285100 Gossypium raimondii
GSVIVG01034512001 Vitis vinifera
HanXRQChr10g0277841 Helianthus annuus
HanXRQChr10g0277851 Helianthus annuus
HanXRQChr10g0279061 Helianthus annuus
Haze_17746 Corylus avellana
Hma1.2p1_0105F.1_g050810 Hydrangea macrophylla
HPP92_019355 Vanilla planifolia
Lalb_Chr01g0009631 Lupinus albus
Lalb_Chr06g0161551 Lupinus albus
Lj4C695G10 Lonicera japonica
Lj5g0004042 Lotus japonicus
Lj7A371T50 Lonicera japonica
Lsat_1_v5_gn_6_99641 Lactuca sativa
Manes.18G091200 Manihot esculenta
Mapoly0014s0164 Marchantia polymorpha
MBI09_g32373_MAGBIO Magnolia biondii
MD05G1023700 Malus domestica
MD10G1024300 Malus domestica
Medtr1g098940 Medicago truncatula
MELO3C023718.2 Cucumis melo
Migut.C01013 Erythranthe guttata
Migut.N03224 Erythranthe guttata
MSTRG.22371 Avicennia marina
Nitab4.5_0000032g0020 Nicotiana tabacum
Nitab4.5_0008759g0020 Nicotiana tabacum
Nn1g06102 Nelumbo nucifera
Nn5g28715 Nelumbo nucifera
Oeu011938.1 Olea europaea
Oeu014493.1 Olea europaea
Oeu014494.1 Olea europaea
Oeu046025.1 Olea europaea
Os04g0421800 Oryza sativa ssp. japonica
Peaxi162Scf00765g00315 Petunia axillaris
PGR044G2101 Punica granatum
PGSC0003DMG401024092 Solanum tuberosum
Phvul.007G079400 Phaseolus vulgaris
Potri.002G069100 Populus trichocarpa
Potri.005G191300 Populus trichocarpa
Pp3c5_6660 Physcomitrium patens
Pp3c6_18530 Physcomitrium patens
PRCOL_00002924 Prasinoderma coloniale
PRCOL_00004133 Prasinoderma coloniale
Prupe.8G028200 Prunus persica
Psat6g193040 Pisum sativum
Psat6g193200 Pisum sativum
PSO210G2251 Papaver somniferum
PSO238G0051 Papaver somniferum
QL02p024060 Quercus lobata
RcHm_v2.0_Chr6g0275661 Rosa chinensis
Rhsim06G0090400 Rhododendron simsii
Sabra02G0054300 Salix brachista
Sabra05G0146100 Salix brachista
SalBow6G6163 Salvia bowleyana
SalBow7G0781 Salvia bowleyana
Sc02g0004170 Simmondsia chinensis
Sed0004003 Sechium edule
Sed0005850 Sechium edule
Sed0016522 Sechium edule
SEGI_31186 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10374 Striga asiatica
SGA_v2.0_scaffold25G11175 Striga asiatica
SHI09390 Sapria himalayana
SMO331G0079 Selaginella moellendorffii
Solyc04g071320.4 Solanum lycopersicum
Sopen04g027280 Solanum pennellii
Sp1g32700 Schrenkiella parvula
TAR381G1500 Trochodendron aralioides
TAR625G0458 Trochodendron aralioides
TAR636G3535 Trochodendron aralioides
THA.LOC104809692 Tarenaya hassleriana
Thecc.08G149900 Theobroma cacao
Thhalv10011324m.g Eutrema salsugineum
TPR.G30003 Trifolium pratense
TPR.G36694 Trifolium pratense
TWI34G0952 Tripterygium wilfordii
TWI60G0041 Tripterygium wilfordii
unitig_62.g23528 Utricularia gibba
vmacro21155 Vaccinium macrocarpon
VMungo0464G1352 Vigna mungo
Zm00001eb422260 Zea mays
Zm00001eb422280 Zea mays
Zm00001eb422320 Zea mays
Zm00001eb422340 Zea mays

User provided reference genes

Program Settings