Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p28000 Brassica napus
Aa31LG4G17500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis
Actinidia03123 Actinidia chinensis
Ah.13g068640 Amaranthus hybridus
AL5G14400 Arabidopsis lyrata
AL5G28510 Arabidopsis lyrata
AL6G42740 Arabidopsis lyrata
Aqoxy3G03421 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea
AT3G49000 Arabidopsis thaliana
ATR0737G144 Amborella trichopoda
Atru.chr1.442 Acer truncatum
AUR62015967 Chenopodium quinoa
AUR62021173 Chenopodium quinoa
BcaB01g00761 Brassica carinata
BcaB02g09572 Brassica carinata
BcaC01g02382 Brassica carinata
BcaC07g39376 Brassica carinata
BolC3t18845H Brassica oleracea
BolC8t50021H Brassica oleracea
BraA06t25741Z Brassica rapa
C03p65870 Brassica napus
C08p23970 Brassica napus
CAN.G208.79 Capsicum annuum
CAN.G527.1 Capsicum annuum
CANSAT21G1295 Cannabis sativa
CANSAT21G1725 Cannabis sativa
CARHR157820 Cardamine hirsuta
Carub.0004s0531 Capsella rubella
Carub.0005s1517 Capsella rubella
Ca_10754_v3 Cicer arietinum L.
CBR_g26425 Chara braunii
CBR_g5700 Chara braunii
CBR_g5701 Chara braunii
Cc02_g02840 Coffea canephora
CDE04G1371 Ceratophyllum demersum
CDE04G3622 Ceratophyllum demersum
Cfa002753 Carpinus fangiana
Cfa022980 Carpinus fangiana
Ciclev10004721m.g Citrus clementina
CiPaw.03G107600 Carya illinoinensis
ClCG05G008100 Citrullus lanatus
COL.COLO4_14329 Corchorus olitorius
Cpa.g.sc107.62 Carica papaya
Cre16.g673900 Chlamydomonas reinhardtii
CsaV3_3G017160 Cucumis sativus L.
CsaV3_3G017180 Cucumis sativus L.
CSS0016908 Camellia sinensis var. sinensis
CSS0035516 Camellia sinensis var. sinensis
DCAR_010301 Daucus carota
DCAR_015049 Daucus carota
Dinv24388 Davidia involucrata
Duzib205G1877 Durio zibethinus
ECA233G0868 Erigeron canadensis
EL10Ac3g05622 Beta vulgaris
Eucgr.K00269 Eucalyptus grandis
FAN01G2609 Fragaria x ananassa
FAN03G0738 Fragaria x ananassa
FAN06G3892 Fragaria x ananassa
FAN06G5094 Fragaria x ananassa
FAN10G3685 Fragaria x ananassa
FAN10G4176 Fragaria x ananassa
FvH4_7g29570 Fragaria vesca
Glyma.10G234800 Glycine max
Glyma.12G162990 Glycine max
Glyma.20G157700 Glycine max
Glyma.20G159500 Glycine max
Gohir.A09G041700 Gossypium hirsutum
Gohir.D09G042500 Gossypium hirsutum
Gorai.006G048800 Gossypium raimondii
GSVIVG01017918001 Vitis vinifera
GSVIVG01028933001 Vitis vinifera
HanXRQChr06g0163701 Helianthus annuus
HanXRQChr06g0163721 Helianthus annuus
HanXRQChr06g0163751 Helianthus annuus
HanXRQChr10g0304161 Helianthus annuus
HanXRQChr15g0497081 Helianthus annuus
Haze_13677 Corylus avellana
Haze_25041 Corylus avellana
HPP92_020192 Vanilla planifolia
Hund04757 Selenicereus undatus
Lalb_Chr06g0161161 Lupinus albus
Lj5g0019412 Lotus japonicus
Lsat_1_v5_gn_3_14041 Lactuca sativa
Lsat_1_v5_gn_8_8441 Lactuca sativa
Manes.14G025200 Manihot esculenta
Mapoly0133s0004 Marchantia polymorpha
MCO01G383 Micromonas commoda
MD01G1202100 Malus domestica
MD07G1271200 Malus domestica
MD07G1271300 Malus domestica
Medtr1g101100 Medicago truncatula
MELO3C031814.2 Cucumis melo
Migut.K00770 Erythranthe guttata
Migut.K01220 Erythranthe guttata
MSTRG.27109 Avicennia marina
Nitab4.5_0000080g0100 Nicotiana tabacum
Nitab4.5_0001951g0070 Nicotiana tabacum
Nn3g16880 Nelumbo nucifera
Oeu002719.1 Olea europaea
Oeu004097.1 Olea europaea
Os01g0679000 Oryza sativa ssp. japonica
Peaxi162Scf00848g00012 Petunia axillaris
Peaxi162Scf00848g00015 Petunia axillaris
PGR142G1152 Punica granatum
Phvul.007G071300 Phaseolus vulgaris
Potri.015G144900 Populus trichocarpa
Pp3c16_7220 Physcomitrium patens
PRCOL_00005694 Prasinoderma coloniale
Prupe.2G295500 Prunus persica
Psat6g198360 Pisum sativum
PSO017G5643 Papaver somniferum
PSO063G7539 Papaver somniferum
QL09p013914 Quercus lobata
RcHm_v2.0_Chr1g0346601 Rosa chinensis
RcHm_v2.0_Chr1g0377571 Rosa chinensis
RcHm_v2.0_Chr2g0108991 Rosa chinensis
RcHm_v2.0_Chr6g0258831 Rosa chinensis
Rhsim09G0198100 Rhododendron simsii
Sabra15G0154400 Salix brachista
SalBow1G2445 Salvia bowleyana
SalBow1G5895 Salvia bowleyana
Sc13g0008680 Simmondsia chinensis
Sc13g0008760 Simmondsia chinensis
Sc13g0008790 Simmondsia chinensis
Sed0007536 Sechium edule
Sed0027520 Sechium edule
SEGI_00380 Sequoiadendron giganteum
SGA_v2.0_scaffold60G21057 Striga asiatica
SHI26612 Sapria himalayana
SMO143G0293 Selaginella moellendorffii
SMO276G0042 Selaginella moellendorffii
Solyc06g036000.4 Solanum lycopersicum
Sopen06g011780 Solanum pennellii
Sp5g13050 Schrenkiella parvula
TAR629G1771 Trochodendron aralioides
THA.LOC104818634 Tarenaya hassleriana
Thecc.03G178300 Theobroma cacao
Thhalv10003189m.g Eutrema salsugineum
Thhalv10010290m.g Eutrema salsugineum
TPR.G27007 Trifolium pratense
TWI14G0685 Tripterygium wilfordii
TWI39G1179 Tripterygium wilfordii
unitig_37.g12531 Utricularia gibba
vmacro09835 Vaccinium macrocarpon
vmacro21316 Vaccinium macrocarpon
VMungo0720G2100 Vigna mungo
VMungo1309G1104 Vigna mungo
Zm00001eb160040 Zea mays
Zm00001eb440850 Zea mays

User provided reference genes

Program Settings