Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p02230 Brassica napus
Aa31LG5G8380 Aethionema arabicum
AL1G12420 Arabidopsis lyrata
AL4G20260 Arabidopsis lyrata
Aqoxy2G04139 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7GTL8A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FGXA9Q Arachis hypogaea
AT2G26970 Arabidopsis thaliana
ATR0661G342 Amborella trichopoda
Atru.chr3.2946 Acer truncatum
AUR62002934 Chenopodium quinoa
AUR62007743 Chenopodium quinoa
BcaB01g01998 Brassica carinata
BcaC04g24019 Brassica carinata
BcaC04g24021 Brassica carinata
BolC3t15557H Brassica oleracea
BolC9t53160H Brassica oleracea
BolC9t53165H Brassica oleracea
BraA09t35872Z Brassica rapa
C03p32150 Brassica napus
C09p02320 Brassica napus
C09p02340 Brassica napus
CAN.G874.52 Capsicum annuum
CANSAT54G2396 Cannabis sativa
CARHR119150 Cardamine hirsuta
Carub.0004s0745 Capsella rubella
Ca_06167_v3 Cicer arietinum L.
Ca_06184_v3 Cicer arietinum L.
Cc01_g15680 Coffea canephora
CDE08G0165 Ceratophyllum demersum
CDE09G0384 Ceratophyllum demersum
Cfa010279 Carpinus fangiana
Cfa021416 Carpinus fangiana
Ciclev10016367m.g Citrus clementina
CiPaw.13G121900 Carya illinoinensis
ClCG02G024120 Citrullus lanatus
COL.COLO4_18343 Corchorus olitorius
Cpa.g.sc34.213 Carica papaya
Cre10.g425800 Chlamydomonas reinhardtii
CsaV3_4G023210 Cucumis sativus L.
CSS0026131 Camellia sinensis var. sinensis
CSS0033533 Camellia sinensis var. sinensis
CSS0048046 Camellia sinensis var. sinensis
CSS0048448 Camellia sinensis var. sinensis
DCAR_012715 Daucus carota
DCAR_012716 Daucus carota
DCAR_018598 Daucus carota
Dinv00703 Davidia involucrata
Dinv18272 Davidia involucrata
Dinv28770 Davidia involucrata
Duzib168G2260 Durio zibethinus
Duzib170G0202 Durio zibethinus
ECA247G3547 Erigeron canadensis
ECA248G0040 Erigeron canadensis
EL10Ac6g14521 Beta vulgaris
Eucgr.B03774 Eucalyptus grandis
FAN11G2354 Fragaria x ananassa
FAN16G2039 Fragaria x ananassa
FvH4_3g27591 Fragaria vesca
Glyma.02G275700 Glycine max
Glyma.14G040400 Glycine max
Gohir.A08G000072 Gossypium hirsutum
Gohir.A13G230300 Gossypium hirsutum
Gohir.D04G099150 Gossypium hirsutum
Gohir.D08G008400 Gossypium hirsutum
Gohir.D13G235800 Gossypium hirsutum
Gorai.004G001600 Gossypium raimondii
Gorai.013G056800 Gossypium raimondii
Gorai.013G266500 Gossypium raimondii
GSVIVG01037421001 Vitis vinifera
HanXRQChr01g0013701 Helianthus annuus
HanXRQChr08g0230891 Helianthus annuus
HanXRQChr08g0230941 Helianthus annuus
HanXRQChr08g0230951 Helianthus annuus
HanXRQChr08g0230961 Helianthus annuus
HanXRQChr08g0230971 Helianthus annuus
Haze_23696 Corylus avellana
Hma1.2p1_1631F.1_g294630 Hydrangea macrophylla
HPP92_004833 Vanilla planifolia
HPP92_004836 Vanilla planifolia
Hund25111 Selenicereus undatus
Lalb_Chr04g0249541 Lupinus albus
Lalb_Chr04g0249551 Lupinus albus
Lalb_Chr04g0249561 Lupinus albus
Lj2A1108T30 Lonicera japonica
LjContig00564g0026958 Lotus japonicus
Lsat_1_v5_gn_5_176000 Lactuca sativa
Lsat_1_v5_gn_9_15660 Lactuca sativa
Manes.05G196500 Manihot esculenta
Mapoly0089s0044 Marchantia polymorpha
MBI06_g07515_MAGBIO Magnolia biondii
MBI06_g07516_MAGBIO Magnolia biondii
MD02G1268200 Malus domestica
MD07G1051600 Malus domestica
Medtr5g088337 Medicago truncatula
MELO3C014695.2 Cucumis melo
Migut.D00780 Erythranthe guttata
Migut.N00694 Erythranthe guttata
MSTRG.18521 Avicennia marina
Nitab4.5_0000105g0450 Nicotiana tabacum
Nitab4.5_0000539g0030 Nicotiana tabacum
Nitab4.5_0001348g0240 Nicotiana tabacum
Nitab4.5_0004383g0040 Nicotiana tabacum
Nitab4.5_0008751g0050 Nicotiana tabacum
Nn7g38012 Nelumbo nucifera
Oeu020446.1 Olea europaea
Os02g0465500 Oryza sativa ssp. japonica
Os04g0303950 Oryza sativa ssp. japonica
Peaxi162Scf00293g00320 Petunia axillaris
Peaxi162Scf00390g00128 Petunia axillaris
Peaxi162Scf01280g00024 Petunia axillaris
PGR102G1910 Punica granatum
PGSC0003DMG400027664 Solanum tuberosum
PGSC0003DMG400043354 Solanum tuberosum
Phvul.008G205900 Phaseolus vulgaris
Potri.001G222300 Populus trichocarpa
Pp3c15_14440 Physcomitrium patens
Pp3c9_12520 Physcomitrium patens
PRCOL_00004118 Prasinoderma coloniale
Prupe.2G051000 Prunus persica
Prupe.2G053500 Prunus persica
Psat2g021120 Pisum sativum
PSO675G0111 Papaver somniferum
PSO732G0764 Papaver somniferum
QL01p007413 Quercus lobata
RcHm_v2.0_Chr5g0050091 Rosa chinensis
Rhsim11G0123600 Rhododendron simsii
Rhsim13G0056300 Rhododendron simsii
SalBow6G3468 Salvia bowleyana
Sc15g0007330 Simmondsia chinensis
Sed0001715 Sechium edule
SEGI_08759 Sequoiadendron giganteum
SEGI_38815 Sequoiadendron giganteum
SGA_v2.0_scaffold158G37484 Striga asiatica
SGA_v2.0_scaffold8G04482 Striga asiatica
SMO361G0388 Selaginella moellendorffii
Solyc06g082810.3 Solanum lycopersicum
Solyc09g018760.2 Solanum lycopersicum
Solyc09g018780.4 Solanum lycopersicum
Sopen06g034170 Solanum pennellii
Sopen09g012370 Solanum pennellii
Sp4g08380 Schrenkiella parvula
TAR633G0334 Trochodendron aralioides
THA.LOC104800478 Tarenaya hassleriana
THA.LOC104816959 Tarenaya hassleriana
Thecc.09G339600 Theobroma cacao
Thhalv10002092m.g Eutrema salsugineum
TPR.G11322 Trifolium pratense
TPR.G27619 Trifolium pratense
TWI79G1652 Tripterygium wilfordii
vmacro02852 Vaccinium macrocarpon
vmacro14664 Vaccinium macrocarpon
VMungo0647G0403 Vigna mungo
Zm00001eb240820 Zea mays

User provided reference genes

Program Settings