Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p30790 Brassica napus
Aa31LG7G2520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis
Actinidia06357 Actinidia chinensis
AL1G30040 Arabidopsis lyrata
Aqoxy125s004 Aquilegia oxysepala
Aqoxy1G02673 Aquilegia oxysepala
Aqoxy1G02674 Aquilegia oxysepala
Aqoxy2G02180 Aquilegia oxysepala
Aqoxy2G02196 Aquilegia oxysepala
Aqoxy2G02322 Aquilegia oxysepala
Aqoxy3G01439 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea
AT1G17690 Arabidopsis thaliana
ATR0626G151 Amborella trichopoda
Atru.chr11.2504 Acer truncatum
AUR62014975 Chenopodium quinoa
AUR62024882 Chenopodium quinoa
AUR62030665 Chenopodium quinoa
BcaB05g23995 Brassica carinata
BcaC03g14585 Brassica carinata
BolC2t08163H Brassica oleracea
BolC8t49447H Brassica oleracea
BraA08t35010Z Brassica rapa
C08p18130 Brassica napus
CAN.G101.3 Capsicum annuum
CAN.G193.38 Capsicum annuum
CAN.G266.3 Capsicum annuum
CAN.G266.4 Capsicum annuum
CANSAT11G2085 Cannabis sativa
CARHR018290 Cardamine hirsuta
Carub.0001s1742 Capsella rubella
Carub.0003s1065 Capsella rubella
Ca_05496_v3 Cicer arietinum L.
CBR_g38171 Chara braunii
Cc06_g21120 Coffea canephora
Cc06_g21130 Coffea canephora
Cc06_g22130 Coffea canephora
Cc10_g11360 Coffea canephora
CDE02G3188 Ceratophyllum demersum
CDE06G1960 Ceratophyllum demersum
Cfa016755 Carpinus fangiana
Cfa022413 Carpinus fangiana
Ciclev10030781m.g Citrus clementina
CiPaw.14G110300 Carya illinoinensis
ClCG06G013510 Citrullus lanatus
COL.COLO4_25458 Corchorus olitorius
COL.COLO4_25459 Corchorus olitorius
Cpa.g.sc86.27 Carica papaya
Cpa.g.sc86.29 Carica papaya
Cre04.g218300 Chlamydomonas reinhardtii
CsaV3_1G031770 Cucumis sativus L.
CSS0048015 Camellia sinensis var. sinensis
DCAR_001330 Daucus carota
DCAR_007396 Daucus carota
DCAR_007397 Daucus carota
Dinv26447 Davidia involucrata
Duzib168G1036 Durio zibethinus
ECA240G3678 Erigeron canadensis
EL10Ac2g02594 Beta vulgaris
EL10As14g24084 Beta vulgaris
Eucgr.A01411 Eucalyptus grandis
FAN07G1720 Fragaria x ananassa
FAN12G3496 Fragaria x ananassa
FAN17G2112 Fragaria x ananassa
FvH4_4g07640 Fragaria vesca
Glyma.09G057700 Glycine max
Glyma.15G163800 Glycine max
Gohir.A05G003500 Gossypium hirsutum
Gohir.D05G003900 Gossypium hirsutum
Gorai.003G081200 Gossypium raimondii
Gorai.009G003500 Gossypium raimondii
GSVIVG01010908001 Vitis vinifera
HanXRQChr03g0068331 Helianthus annuus
Haze_19748 Corylus avellana
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla
HPP92_003076 Vanilla planifolia
HPP92_003077 Vanilla planifolia
HPP92_028564 Vanilla planifolia
HPP92_028565 Vanilla planifolia
Hund24686 Selenicereus undatus
Lalb_Chr02g0148081 Lupinus albus
Lj6g0015551 Lotus japonicus
Lsat_1_v5_gn_7_56501 Lactuca sativa
Manes.17G002500 Manihot esculenta
Mapoly0074s0025 Marchantia polymorpha
MCO16G456 Micromonas commoda
MD03G1036400 Malus domestica
MD13G1245100 Malus domestica
MD13G1251100 Malus domestica
MD13G1251200 Malus domestica
Medtr2g012650 Medicago truncatula
Medtr2g036890 Medicago truncatula
Medtr4g415340 Medicago truncatula
Medtr8g466490 Medicago truncatula
Medtr8g466500 Medicago truncatula
MELO3C017440.2 Cucumis melo
Migut.L01901 Erythranthe guttata
MSTRG.26530 Avicennia marina
Nitab4.5_0000074g0030 Nicotiana tabacum
Nitab4.5_0008918g0010 Nicotiana tabacum
Nn2g10857 Nelumbo nucifera
Nn2g10858 Nelumbo nucifera
Nn8g40996 Nelumbo nucifera
Oeu047314.3 Olea europaea
Os05g0295100 Oryza sativa ssp. japonica
Peaxi162Scf00324g00731 Petunia axillaris
PGSC0003DMG400008511 Solanum tuberosum
Phvul.009G238100 Phaseolus vulgaris
Potri.003G010000 Populus trichocarpa
Pp3c10_17670 Physcomitrium patens
PRCOL_00003641 Prasinoderma coloniale
Prupe.1G079600 Prunus persica
Psat4g047120 Pisum sativum
Psat4g182200 Pisum sativum
Psat4g182280 Pisum sativum
PSO017G1776 Papaver somniferum
PSO478G0715 Papaver somniferum
RcHm_v2.0_Chr4g0400251 Rosa chinensis
Rhsim01G0197100 Rhododendron simsii
Sabra15G0073700 Salix brachista
SalBow1G4534 Salvia bowleyana
SalBow6G0847 Salvia bowleyana
SalBow6G2294 Salvia bowleyana
SalBow6G6994 Salvia bowleyana
Sc06g0007900 Simmondsia chinensis
Sc06g0007910 Simmondsia chinensis
Sed0012322 Sechium edule
SEGI_01043 Sequoiadendron giganteum
SEGI_01124 Sequoiadendron giganteum
SEGI_01614 Sequoiadendron giganteum
SEGI_35111 Sequoiadendron giganteum
SGA_v2.0_scaffold595G53113 Striga asiatica
SMO174G0270 Selaginella moellendorffii
SMO296G0020 Selaginella moellendorffii
Solyc07g009350.4 Solanum lycopersicum
Sopen07g005110 Solanum pennellii
Sp4g05240 Schrenkiella parvula
TAR636G3589 Trochodendron aralioides
THA.LOC104813512 Tarenaya hassleriana
Thecc.09G180200 Theobroma cacao
Thhalv10006892m.g Eutrema salsugineum
Thhalv10023137m.g Eutrema salsugineum
TPR.G9024 Trifolium pratense
TWI38G2172 Tripterygium wilfordii
unitig_8.g3549 Utricularia gibba
vmacro08789 Vaccinium macrocarpon
VMungo1309G0231 Vigna mungo
Zm00001eb406370 Zea mays

User provided reference genes

Program Settings