Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p37220 Brassica napus
Aa31LG11G5130 Aethionema arabicum
Aa31LG11G5160 Aethionema arabicum
Aa31LG9G10320 Aethionema arabicum
Aa31LG9G10330 Aethionema arabicum
Aa31sc1931G10 Aethionema arabicum
Actinidia32098 Actinidia chinensis
Ah.01g022090 Amaranthus hybridus
AL8G20730 Arabidopsis lyrata
Aqoxy7G01406 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea
AT5G48120 Arabidopsis thaliana
ATR0705G185 Amborella trichopoda
Atru.chr1.3524 Acer truncatum
AUR62022206 Chenopodium quinoa
AUR62031915 Chenopodium quinoa
BcaB07g30001 Brassica carinata
BcaC03g17628 Brassica carinata
BolC2t11683H Brassica oleracea
BraA02t08709Z Brassica rapa
C02p56250 Brassica napus
CAN.G1143.14 Capsicum annuum
CANSAT56G2471 Cannabis sativa
CARHR259290 Cardamine hirsuta
Carub.0008s0769 Capsella rubella
Ca_01165_v3 Cicer arietinum L.
CBR_g26190 Chara braunii
Cc04_g02550 Coffea canephora
CDE05G1834 Ceratophyllum demersum
CDE05G2530 Ceratophyllum demersum
Cfa003647 Carpinus fangiana
Ciclev10024743m.g Citrus clementina
CiPaw.01G231400 Carya illinoinensis
ClCG09G000210 Citrullus lanatus
ClCG09G000220 Citrullus lanatus
COL.COLO4_30513 Corchorus olitorius
Cpa.g.sc25.3 Carica papaya
Cpa.g.sc25.4 Carica papaya
Cpa.g.sc25.5 Carica papaya
Cpa.g.sc25.8 Carica papaya
Cre13.g605050 Chlamydomonas reinhardtii
CsaV3_7G035270 Cucumis sativus L.
CSS0015659 Camellia sinensis var. sinensis
CSS0023144 Camellia sinensis var. sinensis
CSS0024787 Camellia sinensis var. sinensis
CSS0025899 Camellia sinensis var. sinensis
CSS0026050 Camellia sinensis var. sinensis
CSS0028150 Camellia sinensis var. sinensis
CSS0028178 Camellia sinensis var. sinensis
CSS0036196 Camellia sinensis var. sinensis
CSS0044368 Camellia sinensis var. sinensis
CSS0046761 Camellia sinensis var. sinensis
DCAR_023080 Daucus carota
Dinv37977 Davidia involucrata
Duzib192G0210 Durio zibethinus
ECA232G2699 Erigeron canadensis
EL10Ac9g21204 Beta vulgaris
EL10Ac9g21205 Beta vulgaris
Eucgr.F03079 Eucalyptus grandis
FAN02G1073 Fragaria x ananassa
FAN05G4332 Fragaria x ananassa
FAN09G4229 Fragaria x ananassa
FAN14G4820 Fragaria x ananassa
FvH4_6g32400 Fragaria vesca
Glyma.13G354600 Glycine max
Glyma.15G019600 Glycine max
Gohir.A06G189400 Gossypium hirsutum
Gohir.D06G197800 Gossypium hirsutum
Gorai.010G230600 Gossypium raimondii
GSVIVG01016980001 Vitis vinifera
HanXRQChr09g0276251 Helianthus annuus
Haze_15848 Corylus avellana
HPP92_007690 Vanilla planifolia
HPP92_007773 Vanilla planifolia
HPP92_007804 Vanilla planifolia
Hund07601 Selenicereus undatus
Hund28828 Selenicereus undatus
Hund28869 Selenicereus undatus
Lalb_Chr14g0373021 Lupinus albus
Lj1g0009957 Lotus japonicus
Lj1g0017121 Lotus japonicus
Lj9C513G3 Lonicera japonica
Lsat_1_v5_gn_4_97440 Lactuca sativa
Manes.11G033500 Manihot esculenta
Mapoly0036s0119 Marchantia polymorpha
MBI04_g20307_MAGBIO Magnolia biondii
MCO12G207 Micromonas commoda
MD09G1202800 Malus domestica
Medtr2g100870 Medicago truncatula
Medtr5g055460 Medicago truncatula
Medtr5g085950 Medicago truncatula
MELO3C024437.2 Cucumis melo
Migut.I00897 Erythranthe guttata
MSTRG.11027 Avicennia marina
Nitab4.5_0006467g0020 Nicotiana tabacum
Nitab4.5_0006902g0020 Nicotiana tabacum
Nn8g39071 Nelumbo nucifera
Oeu017119.1 Olea europaea
Os07g0177100 Oryza sativa ssp. japonica
Peaxi162Scf00038g01031 Petunia axillaris
Peaxi162Scf00038g01032 Petunia axillaris
PGR102G3176 Punica granatum
Phvul.005G166100 Phaseolus vulgaris
Potri.003G048800 Populus trichocarpa
Pp3c9_4950 Physcomitrium patens
Prupe.3G059000 Prunus persica
Psat3g036640 Pisum sativum
Psat4g171400 Pisum sativum
Psat5g295800 Pisum sativum
PSO063G3373 Papaver somniferum
PSO832G2466 Papaver somniferum
QL05p020001 Quercus lobata
QL05p020031 Quercus lobata
RcHm_v2.0_Chr2g0140541 Rosa chinensis
Rhsim08G0227600 Rhododendron simsii
Sabra03G0029200 Salix brachista
Sabra03G0029300 Salix brachista
Sc10g0007590 Simmondsia chinensis
Sc17g0002930 Simmondsia chinensis
Sed0021872 Sechium edule
SEGI_23779 Sequoiadendron giganteum
SEGI_26537 Sequoiadendron giganteum
SGA_v2.0_scaffold123G33404 Striga asiatica
SGA_v2.0_scaffold66G22528 Striga asiatica
SHI11089 Sapria himalayana
SHI11090 Sapria himalayana
SHI11092 Sapria himalayana
SMO111G0185 Selaginella moellendorffii
Solyc03g121030.2 Solanum lycopersicum
Sopen03g039860 Solanum pennellii
Sp2g18530 Schrenkiella parvula
TAR624G0206 Trochodendron aralioides
TAR624G0246 Trochodendron aralioides
TAR624G0431 Trochodendron aralioides
TAR624G0921 Trochodendron aralioides
TAR636G2911 Trochodendron aralioides
THA.LOC104809828 Tarenaya hassleriana
Thecc.06G100100 Theobroma cacao
Thhalv10003552m.g Eutrema salsugineum
TPR.G18835 Trifolium pratense
TPR.G18837 Trifolium pratense
TPR.G18859 Trifolium pratense
TPR.G6596 Trifolium pratense
TPR.G7163 Trifolium pratense
TWI12G0408 Tripterygium wilfordii
TWI75G1452 Tripterygium wilfordii
unitig_88.g27601 Utricularia gibba
unitig_88.g27602 Utricularia gibba
vmacro18852 Vaccinium macrocarpon
Zm00001eb029900 Zea mays
Zm00001eb105150 Zea mays
Zm00001eb301230 Zea mays
Zm00001eb320400 Zea mays
Zm00001eb350570 Zea mays

User provided reference genes

Program Settings