Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p23880 Brassica napus
A08p08150 Brassica napus
Aa31LG6G8560 Aethionema arabicum
Aa31LG9G14630 Aethionema arabicum
Actinidia10327 Actinidia chinensis
Actinidia29591 Actinidia chinensis
Actinidia30780 Actinidia chinensis
Actinidia33131 Actinidia chinensis
Ah.05g169900 Amaranthus hybridus
AL1G49810 Arabidopsis lyrata
AL6G41610 Arabidopsis lyrata
Aqoxy6G00764 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.S8GTV1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XFU76C Arachis hypogaea
AT1G34780 Arabidopsis thaliana
AT4G08930 Arabidopsis thaliana
ATR0782G075 Amborella trichopoda
Atru.chr13.1174 Acer truncatum
AUR62018926 Chenopodium quinoa
AUR62027771 Chenopodium quinoa
BcaB04g17851 Brassica carinata
BcaC05g27751 Brassica carinata
BcaC07g37528 Brassica carinata
BolC5t32483H Brassica oleracea
BolC8t47846H Brassica oleracea
BraA05t21264Z Brassica rapa
BraA08t32837Z Brassica rapa
C05p37410 Brassica napus
CAN.G193.34 Capsicum annuum
CANSAT25G0016 Cannabis sativa
CARHR034050 Cardamine hirsuta
Carub.0001s3271 Capsella rubella
Carub.0006s2753 Capsella rubella
Ca_15251_v3 Cicer arietinum L.
Cc10_g07110 Coffea canephora
CDE03G0263 Ceratophyllum demersum
CDE06G1410 Ceratophyllum demersum
Cfa013643 Carpinus fangiana
Ciclev10001862m.g Citrus clementina
CiPaw.07G179100 Carya illinoinensis
CiPaw.08G045800 Carya illinoinensis
ClCG08G011140 Citrullus lanatus
COL.COLO4_16383 Corchorus olitorius
Cpa.g.sc36.142 Carica papaya
CsaV3_2G029720 Cucumis sativus L.
CSS0006485 Camellia sinensis var. sinensis
CSS0032152 Camellia sinensis var. sinensis
Dinv14337 Davidia involucrata
Dinv44781 Davidia involucrata
Duzib041G0589 Durio zibethinus
Duzib093G1826 Durio zibethinus
Duzib116G0470 Durio zibethinus
ECA232G3609 Erigeron canadensis
EL10Ac1g01208 Beta vulgaris
Eucgr.F00332 Eucalyptus grandis
FAN04G1761 Fragaria x ananassa
FAN08G3035 Fragaria x ananassa
FAN13G2763 Fragaria x ananassa
FAN18G4216 Fragaria x ananassa
FvH4_5g37130 Fragaria vesca
Glyma.04G101100 Glycine max
Glyma.04G101300 Glycine max
Glyma.06G102800 Glycine max
Glyma.06G103000 Glycine max
Gohir.A01G127100 Gossypium hirsutum
Gohir.A02G076400 Gossypium hirsutum
Gohir.A06G035300 Gossypium hirsutum
Gohir.D01G115000 Gossypium hirsutum
Gohir.D02G083600 Gossypium hirsutum
Gohir.D06G035900 Gossypium hirsutum
Gorai.002G140600 Gossypium raimondii
Gorai.005G094200 Gossypium raimondii
Gorai.010G039900 Gossypium raimondii
HanXRQChr05g0145431 Helianthus annuus
HanXRQChr10g0278301 Helianthus annuus
HanXRQChr15g0490021 Helianthus annuus
Haze_22277 Corylus avellana
Hma1.2p1_0575F.1_g181650 Hydrangea macrophylla
HPP92_013106 Vanilla planifolia
Hund26966 Selenicereus undatus
Lalb_Chr08g0242071 Lupinus albus
Lalb_Chr23g0270551 Lupinus albus
Lj1g0010905 Lotus japonicus
Lj4A724T57 Lonicera japonica
Lj4C101T10 Lonicera japonica
Lsat_1_v5_gn_6_103221 Lactuca sativa
Lsat_1_v5_gn_9_41741 Lactuca sativa
Manes.02G151800 Manihot esculenta
Manes.18G066600 Manihot esculenta
MBI02_g35748_MAGBIO Magnolia biondii
MD08G1184200 Malus domestica
MD15G1370700 Malus domestica
Medtr3g074620 Medicago truncatula
MELO3C011030.2 Cucumis melo
Migut.N02891 Erythranthe guttata
MSTRG.22159 Avicennia marina
MSTRG.24452 Avicennia marina
Nitab4.5_0000232g0070 Nicotiana tabacum
Nitab4.5_0006616g0020 Nicotiana tabacum
Nn1g05383 Nelumbo nucifera
Nn5g30081 Nelumbo nucifera
Oeu046306.1 Olea europaea
Oeu053215.1 Olea europaea
Os02g0754900 Oryza sativa ssp. japonica
Os06g0220800 Oryza sativa ssp. japonica
Os08g0412401 Oryza sativa ssp. japonica
Peaxi162Scf00392g00414 Petunia axillaris
PGR042G1033 Punica granatum
PGSC0003DMG400006416 Solanum tuberosum
Phvul.009G031500 Phaseolus vulgaris
Potri.002G097601 Populus trichocarpa
Potri.005G164200 Populus trichocarpa
Pp3c3_31740 Physcomitrium patens
Prupe.1G518400 Prunus persica
Psat5g138800 Pisum sativum
PSO210G3292 Papaver somniferum
PSO541G3286 Papaver somniferum
PSO541G6282 Papaver somniferum
PSO781G0164 Papaver somniferum
PSO781G0188 Papaver somniferum
QL12p036962 Quercus lobata
RcHm_v2.0_Chr7g0238681 Rosa chinensis
RcHm_v2.0_Chr7g0243971 Rosa chinensis
Rhsim07G0203100 Rhododendron simsii
Sabra02G0076600 Salix brachista
Sabra05G0123700 Salix brachista
SalBow7G3512 Salvia bowleyana
Sc01g0000490 Simmondsia chinensis
Sed0006709 Sechium edule
SEGI_10688 Sequoiadendron giganteum
SGA_v2.0_scaffold84G26524 Striga asiatica
Solyc04g074240.3 Solanum lycopersicum
Sopen04g029380 Solanum pennellii
Sp1g29830 Schrenkiella parvula
Sp6g08780 Schrenkiella parvula
TAR076G0003 Trochodendron aralioides
TAR381G0584 Trochodendron aralioides
TAR628G0769 Trochodendron aralioides
THA.LOC104813116 Tarenaya hassleriana
THA.LOC104816697 Tarenaya hassleriana
Thecc.08G105600 Theobroma cacao
Thhalv10001824m.g Eutrema salsugineum
Thhalv10028636m.g Eutrema salsugineum
TPR.G26155 Trifolium pratense
TWI12G0733 Tripterygium wilfordii
TWI36G0392 Tripterygium wilfordii
TWI56G0625 Tripterygium wilfordii
unitig_578.g16197 Utricularia gibba
unitig_8.g4839 Utricularia gibba
vmacro04740 Vaccinium macrocarpon
vmacro12488 Vaccinium macrocarpon
VMungo1309G2150 Vigna mungo
Zm00001eb042300 Zea mays
Zm00001eb194120 Zea mays
Zm00001eb255320 Zea mays

User provided reference genes

Program Settings