Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03050 Brassica napus
A09p50430 Brassica napus
Aa31sc1187G30 Aethionema arabicum
Aa31sc992G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3516 Anthoceros agrestis
Actinidia03569 Actinidia chinensis
Actinidia14156 Actinidia chinensis
Ah.05g177530 Amaranthus hybridus
Ah.05g177540 Amaranthus hybridus
AL5G39140 Arabidopsis lyrata
Aqoxy5G02379 Aquilegia oxysepala
Aqoxy6G01297 Aquilegia oxysepala
AT3G57560 Arabidopsis thaliana
ATR0782G017 Amborella trichopoda
Atru.chr7.2707 Acer truncatum
AUR62004328 Chenopodium quinoa
AUR62033316 Chenopodium quinoa
AUR62033343 Chenopodium quinoa
BcaB02g08309 Brassica carinata
BcaC02g09949 Brassica carinata
BcaC07g40367 Brassica carinata
BcaC07g40389 Brassica carinata
BolC4t25037H Brassica oleracea
BolC8t50911H Brassica oleracea
BraA04t16028Z Brassica rapa
BraA09t40494Z Brassica rapa
C04p34850 Brassica napus
C08p33110 Brassica napus
CAN.G135.28 Capsicum annuum
CAN.G506.1 Capsicum annuum
CANSAT25G2792 Cannabis sativa
CARHR167790 Cardamine hirsuta
Carub.0005s2440 Capsella rubella
CBR_g38963 Chara braunii
CBR_g84854 Chara braunii
Cc00_g30070 Coffea canephora
Cc07_g16840 Coffea canephora
Cc07_g16850 Coffea canephora
Cc07_g17450 Coffea canephora
Cfa013231 Carpinus fangiana
Ciclev10008739m.g Citrus clementina
CiPaw.07G216400 Carya illinoinensis
ClCG08G012830 Citrullus lanatus
COL.COLO4_15466 Corchorus olitorius
Cpa.g.sc6.178 Carica papaya
Cre01.g015000 Chlamydomonas reinhardtii
CsaV3_2G031570 Cucumis sativus L.
CSS0019677 Camellia sinensis var. sinensis
DCAR_020609 Daucus carota
Dinv09453 Davidia involucrata
Duzib116G0244 Durio zibethinus
Duzib177G0635 Durio zibethinus
ECA234G1135 Erigeron canadensis
ECA248G2210 Erigeron canadensis
Eucgr.C02143 Eucalyptus grandis
FAN20G1771 Fragaria x ananassa
FAN24G2569 Fragaria x ananassa
FAN27G1718 Fragaria x ananassa
FvH4_2g30500 Fragaria vesca
Glyma.04G073800 Glycine max
Glyma.06G074900 Glycine max
Gohir.A13G118600 Gossypium hirsutum
Gohir.D13G122400 Gossypium hirsutum
Gorai.013G137200 Gossypium raimondii
GSVIVG01035586001 Vitis vinifera
HanXRQChr10g0278011 Helianthus annuus
HanXRQChr10g0278111 Helianthus annuus
HanXRQChr11g0330611 Helianthus annuus
HanXRQChr15g0492511 Helianthus annuus
Haze_05098 Corylus avellana
Haze_20257 Corylus avellana
Haze_21661 Corylus avellana
Haze_27393 Corylus avellana
Hma1.2p1_1382F.1_g279370 Hydrangea macrophylla
Hma1.2p1_2176F.1_g316120 Hydrangea macrophylla
HPP92_022465 Vanilla planifolia
Hund19379 Selenicereus undatus
Lalb_Chr23g0268941 Lupinus albus
Lj1g0005088 Lotus japonicus
Lj8A3T12 Lonicera japonica
Lsat_1_v5_gn_5_164581 Lactuca sativa
Manes.07G077700 Manihot esculenta
Manes.10G056500 Manihot esculenta
Mapoly0031s0070 Marchantia polymorpha
MCO12G331 Micromonas commoda
MD08G1134500 Malus domestica
Medtr3g108460 Medicago truncatula
MELO3C011208.2 Cucumis melo
Migut.F01615 Erythranthe guttata
Migut.H01099 Erythranthe guttata
MSTRG.23424 Avicennia marina
MSTRG.2681 Avicennia marina
Nitab4.5_0000320g0090 Nicotiana tabacum
Nitab4.5_0006112g0010 Nicotiana tabacum
Nn1g00932 Nelumbo nucifera
Oeu019002.1 Olea europaea
Oeu048127.1 Olea europaea
Oeu054666.1 Olea europaea
Os02g0657600 Oryza sativa ssp. japonica
Os04g0550500 Oryza sativa ssp. japonica
Peaxi162Scf00178g00004 Petunia axillaris
Peaxi162Scf00896g00012 Petunia axillaris
PGR102G0041 Punica granatum
PGSC0003DMG400003981 Solanum tuberosum
Phvul.009G099600 Phaseolus vulgaris
Potri.006G280100 Populus trichocarpa
Potri.018G001600 Populus trichocarpa
Pp3c4_8600 Physcomitrium patens
PRCOL_00003640 Prasinoderma coloniale
Prupe.1G463900 Prunus persica
Psat5g026120 Pisum sativum
PSO063G5534 Papaver somniferum
QL12p030933 Quercus lobata
RcHm_v2.0_Chr3g0471221 Rosa chinensis
RcHm_v2.0_Chr5g0021691 Rosa chinensis
RcHm_v2.0_Chr6g0246551 Rosa chinensis
RcHm_v2.0_Chr6g0292021 Rosa chinensis
RcHm_v2.0_Chr6g0312541 Rosa chinensis
RcHm_v2.0_Chr7g0238931 Rosa chinensis
Rhsim01G0105900 Rhododendron simsii
Rhsim07G0172400 Rhododendron simsii
Rhsim07G0173100 Rhododendron simsii
RhsimUnG0016600 Rhododendron simsii
SalBow6G1621 Salvia bowleyana
Sc23g0004440 Simmondsia chinensis
Sc23g0004610 Simmondsia chinensis
Sc23g0004670 Simmondsia chinensis
Sc23g0004690 Simmondsia chinensis
Sc23g0004740 Simmondsia chinensis
Sc23g0004780 Simmondsia chinensis
Sc23g0004800 Simmondsia chinensis
Sed0016385 Sechium edule
Sed0022277 Sechium edule
SEGI_17498 Sequoiadendron giganteum
SEGI_19958 Sequoiadendron giganteum
SEGI_29454 Sequoiadendron giganteum
SEGI_35978 Sequoiadendron giganteum
SGA_v2.0_scaffold231G43409 Striga asiatica
SHI12423 Sapria himalayana
SMO364G0053 Selaginella moellendorffii
Solyc11g005620.1 Solanum lycopersicum
Sopen11g001580 Solanum pennellii
Sp5g05030 Schrenkiella parvula
TAR636G3119 Trochodendron aralioides
THA.LOC104802261 Tarenaya hassleriana
Thecc.03G146100 Theobroma cacao
Thecc.08G172900 Theobroma cacao
Thhalv10006042m.g Eutrema salsugineum
TPR.G12308 Trifolium pratense
TWI14G0248 Tripterygium wilfordii
unitig_8.g3509 Utricularia gibba
vmacro20743 Vaccinium macrocarpon
VMungo0464G0912 Vigna mungo
Zm00001eb074610 Zea mays
Zm00001eb186530 Zea mays

User provided reference genes

Program Settings