Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p10880 Brassica napus
Aa31LG10G6520 Aethionema arabicum
Aa31LG10G6530 Aethionema arabicum
Actinidia00605 Actinidia chinensis
Ah.13g069630 Amaranthus hybridus
Ah.13g069640 Amaranthus hybridus
Ah.13g071200 Amaranthus hybridus
AL4G30770 Arabidopsis lyrata
Aqoxy1G02020_Aqoxy1G02021 Aquilegia oxysepala
Aqoxy2G01760 Aquilegia oxysepala
Aqoxy2G01761 Aquilegia oxysepala
Aqoxy7G00166 Aquilegia oxysepala
Aqoxy7G00167 Aquilegia oxysepala
Aqoxy7G00170 Aquilegia oxysepala
Aqoxy7G00171 Aquilegia oxysepala
Aqoxy88s004 Aquilegia oxysepala
Aqoxy88s005 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.40GDTE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LUZ6WJ Arachis hypogaea
AT2G34780 Arabidopsis thaliana
ATR0763G237 Amborella trichopoda
Atru.chr3.3028 Acer truncatum
Atru.chr3.3029 Acer truncatum
AUR62005921 Chenopodium quinoa
AUR62028142 Chenopodium quinoa
BcaB02g09508 Brassica carinata
BcaB06g28799 Brassica carinata
BcaC01g05762 Brassica carinata
BcaC02g11559 Brassica carinata
BolC3t14646H Brassica oleracea
BolC4t22987H Brassica oleracea
BolC4t27871H Brassica oleracea
BraA05t20033Z Brassica rapa
C04p13980 Brassica napus
CANSAT35G1118 Cannabis sativa
CARHR128940 Cardamine hirsuta
Carub.0004s1646 Capsella rubella
Carub.0004s1647 Capsella rubella
Ca_00871_v3 Cicer arietinum L.
Cc09_g07500 Coffea canephora
CDE06G2236 Ceratophyllum demersum
Cfa000799 Carpinus fangiana
Ciclev10014031m.g Citrus clementina
CiPaw.09G143100 Carya illinoinensis
CiPaw.16G039600 Carya illinoinensis
ClCG03G008270 Citrullus lanatus
Cpa.g.sc166.48 Carica papaya
CsaV3_1G037120 Cucumis sativus L.
CSS0016153 Camellia sinensis var. sinensis
DCAR_003834 Daucus carota
DCAR_005756 Daucus carota
Dinv27169 Davidia involucrata
Dinv27170 Davidia involucrata
Dinv27171 Davidia involucrata
ECA246G0263 Erigeron canadensis
EL10Ac3g05106 Beta vulgaris
Eucgr.D00091 Eucalyptus grandis
Eucgr.D00092 Eucalyptus grandis
FAN11G1468 Fragaria x ananassa
FAN16G1113 Fragaria x ananassa
FAN21G1521 Fragaria x ananassa
FAN25G0341 Fragaria x ananassa
FAN25G0646 Fragaria x ananassa
FAN25G0785 Fragaria x ananassa
FAN25G2195 Fragaria x ananassa
FvH4_3g10781 Fragaria vesca
Glyma.02G281900 Glycine max
Glyma.14G032500 Glycine max
Gohir.A05G112850 Gossypium hirsutum
Gohir.A10G007300 Gossypium hirsutum
Gohir.D05G113300 Gossypium hirsutum
Gohir.D05G113400 Gossypium hirsutum
Gohir.D10G007200 Gossypium hirsutum
Gorai.009G117400 Gossypium raimondii
Gorai.011G007900 Gossypium raimondii
GSVIVG01035591001 Vitis vinifera
GSVIVG01035592001 Vitis vinifera
HanXRQChr03g0080681 Helianthus annuus
Haze_05902 Corylus avellana
HPP92_022551 Vanilla planifolia
HPP92_022552 Vanilla planifolia
Hund21086 Selenicereus undatus
Lalb_Chr04g0249051 Lupinus albus
Lalb_Chr15g0088861 Lupinus albus
Lj1C1160T1 Lonicera japonica
Lj6g0015855 Lotus japonicus
Lj6g0020062 Lotus japonicus
LjContig00049g0025087 Lotus japonicus
Lsat_1_v5_gn_3_43520 Lactuca sativa
Manes.06G058900 Manihot esculenta
Mapoly0049s0034 Marchantia polymorpha
MBI18_g10016_MAGBIO Magnolia biondii
MD05G1268800 Malus domestica
MD10G1247500 Malus domestica
Medtr2g031380 Medicago truncatula
Medtr5g090200 Medicago truncatula
Medtr5g090215 Medicago truncatula
MELO3C002837.2 Cucumis melo
MELO3C005104.2 Cucumis melo
MELO3C033745.2 Cucumis melo
Migut.M00948 Erythranthe guttata
Nitab4.5_0000076g0130 Nicotiana tabacum
Nitab4.5_0002094g0030 Nicotiana tabacum
Nn1g08322 Nelumbo nucifera
Oeu046929.1 Olea europaea
Os01g0768700 Oryza sativa ssp. japonica
Peaxi162Scf01909g00118 Petunia axillaris
PGR083G2529 Punica granatum
Phvul.008G197100 Phaseolus vulgaris
Potri.001G463700 Populus trichocarpa
Potri.011G161901 Populus trichocarpa
Prupe.4G095800 Prunus persica
Psat1g165880 Pisum sativum
PSO541G0381 Papaver somniferum
PSO541G3520 Papaver somniferum
PSO541G4161 Papaver somniferum
PSO541G6300 Papaver somniferum
PSO675G1291 Papaver somniferum
PSO675G2011 Papaver somniferum
PSO675G3866 Papaver somniferum
QL05p063822 Quercus lobata
RcHm_v2.0_Chr5g0017511 Rosa chinensis
Rhsim03G0093400 Rhododendron simsii
Rhsim06G0213800 Rhododendron simsii
Rhsim13G0123000 Rhododendron simsii
Sabra11G0141700 Salix brachista
SalBow8G1057 Salvia bowleyana
Sc19g0000270 Simmondsia chinensis
Sed0027997 Sechium edule
SEGI_21549 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00142 Striga asiatica
SGA_v2.0_scaffold333G49012 Striga asiatica
SGA_v2.0_scaffold73G24471 Striga asiatica
SHI24812 Sapria himalayana
SHI24814 Sapria himalayana
SHI24815 Sapria himalayana
Solyc02g022870.4 Solanum lycopersicum
Solyc07g041330.3 Solanum lycopersicum
Sopen02g006450 Solanum pennellii
Sopen07g020710 Solanum pennellii
Sopen07g020720 Solanum pennellii
Sp4g17070 Schrenkiella parvula
TAR626G1389 Trochodendron aralioides
TAR633G0821 Trochodendron aralioides
TAR633G2434 Trochodendron aralioides
THA.LOC104812690 Tarenaya hassleriana
Thecc.06G015200 Theobroma cacao
Thhalv10016158m.g Eutrema salsugineum
TPR.G125 Trifolium pratense
TPR.G22269 Trifolium pratense
TWI63G1468 Tripterygium wilfordii
unitig_748.g7646 Utricularia gibba
vmacro03361 Vaccinium macrocarpon
VMungo0647G0154 Vigna mungo
Zm00001eb152060 Zea mays

User provided reference genes

Program Settings