Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p17330 Brassica napus
A07p37720 Brassica napus
Aa31LG2G7800 Aethionema arabicum
Actinidia33010 Actinidia chinensis
AL2G31090 Arabidopsis lyrata
Aqoxy3G02687 Aquilegia oxysepala
Aqoxy3G02689_Aqoxy3G02690 Aquilegia oxysepala
Aqoxy3G04244 Aquilegia oxysepala
Aqoxy5G00826 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8327BB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ATP5C9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DYSV1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MQV2C0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P0FJQ9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1TJ9S Arachis hypogaea
AT1G71430 Arabidopsis thaliana
ATR0736G167 Amborella trichopoda
Atru.chr4.2044 Acer truncatum
AUR62009845 Chenopodium quinoa
AUR62017723 Chenopodium quinoa
AUR62038158 Chenopodium quinoa
BcaB05g24668 Brassica carinata
BcaC02g09527 Brassica carinata
BcaC03g15291 Brassica carinata
BcaC08g46579 Brassica carinata
BolC2t08948H Brassica oleracea
BolC4t25958H Brassica oleracea
BolC6t39610H Brassica oleracea
BraA02t06780Z Brassica rapa
BraA07t31335Z Brassica rapa
C02p28980 Brassica napus
C04p43760 Brassica napus
C06p45590 Brassica napus
CAN.G490.38 Capsicum annuum
CAN.G630.7 Capsicum annuum
CANSAT25G0049 Cannabis sativa
CANSAT25G2974 Cannabis sativa
CANSAT56G2106 Cannabis sativa
CARHR045930 Cardamine hirsuta
CARHR291250 Cardamine hirsuta
Carub.0002s1828 Capsella rubella
Ca_12871_v3 Cicer arietinum L.
Cc00_g19310 Coffea canephora
Cc02_g28780 Coffea canephora
CDE02G0226 Ceratophyllum demersum
CDE05G2657 Ceratophyllum demersum
Cfa004725 Carpinus fangiana
Ciclev10029295m.g Citrus clementina
Ciclev10029331m.g Citrus clementina
CiPaw.05G182000 Carya illinoinensis
ClCG10G002170 Citrullus lanatus
COL.COLO4_17806 Corchorus olitorius
COL.COLO4_26627 Corchorus olitorius
Cpa.g.c27001.4 Carica papaya
Cre03.g168500 Chlamydomonas reinhardtii
CsaV3_3G002260 Cucumis sativus L.
CSS0010443 Camellia sinensis var. sinensis
CSS0030116 Camellia sinensis var. sinensis
DCAR_007735 Daucus carota
DCAR_016241 Daucus carota
DCAR_027620 Daucus carota
Dinv22681 Davidia involucrata
Duzib132G0558 Durio zibethinus
ECA240G1502 Erigeron canadensis
ECA248G2169 Erigeron canadensis
EL10Ac7g16361 Beta vulgaris
Eucgr.C02425 Eucalyptus grandis
Eucgr.I02508 Eucalyptus grandis
FAN10G1293 Fragaria x ananassa
FAN24G0749 Fragaria x ananassa
FvH4_2g02960 Fragaria vesca
FvH4_7g09300 Fragaria vesca
Glyma.10G254400 Glycine max
Glyma.20G137100 Glycine max
Gohir.A01G180500 Gossypium hirsutum
Gohir.A01G180600 Gossypium hirsutum
Gohir.D01G171500 Gossypium hirsutum
Gohir.D01G171700 Gossypium hirsutum
Gorai.002G213200 Gossypium raimondii
GSVIVG01022390001 Vitis vinifera
GSVIVG01037017001 Vitis vinifera
HanXRQChr05g0160091 Helianthus annuus
HanXRQChr11g0345411 Helianthus annuus
Haze_10334 Corylus avellana
Hund20829 Selenicereus undatus
Lalb_Chr02g0144821 Lupinus albus
Lj5g0002463 Lotus japonicus
Lj6g0021608 Lotus japonicus
Lj8C288T1 Lonicera japonica
Lj8P345T14 Lonicera japonica
Manes.07G051000 Manihot esculenta
Manes.10G087700 Manihot esculenta
Mapoly0060s0029 Marchantia polymorpha
MBI13_g09224_MAGBIO Magnolia biondii
MD05G1109000 Malus domestica
MD10G1112800 Malus domestica
Medtr1g009780 Medicago truncatula
Medtr3g080910 Medicago truncatula
Medtr3g080930 Medicago truncatula
MELO3C013897.2 Cucumis melo
Migut.M00048 Erythranthe guttata
MSTRG.6635 Avicennia marina
Nitab4.5_0000575g0030 Nicotiana tabacum
Nitab4.5_0001458g0040 Nicotiana tabacum
Nitab4.5_0002078g0010 Nicotiana tabacum
Nn2g15843 Nelumbo nucifera
Nn4g25002 Nelumbo nucifera
Oeu012349.1 Olea europaea
Os01g0617800 Oryza sativa ssp. japonica
Peaxi162Scf00170g00041 Petunia axillaris
PGR142G3141 Punica granatum
PGSC0003DMG400005017 Solanum tuberosum
PGSC0003DMG400028994 Solanum tuberosum
Phvul.007G048400 Phaseolus vulgaris
Potri.015G035700 Populus trichocarpa
Pp3c4_10090 Physcomitrium patens
Prupe.8G152600 Prunus persica
Psat6g007560 Pisum sativum
PSO017G4159 Papaver somniferum
PSO170G1452 Papaver somniferum
PSO170G1616 Papaver somniferum
PSO528G0234 Papaver somniferum
QL09p037751 Quercus lobata
QL11p028495 Quercus lobata
RcHm_v2.0_Chr6g0247751 Rosa chinensis
Rhsim02G0173400 Rhododendron simsii
Rhsim09G0033000 Rhododendron simsii
RhsimUnG0159200 Rhododendron simsii
SalBow7G1175 Salvia bowleyana
SalBow7G1333 Salvia bowleyana
Sc12g0010390 Simmondsia chinensis
Sed0002941 Sechium edule
Sed0006388 Sechium edule
SEGI_32093 Sequoiadendron giganteum
SGA_v2.0_scaffold181G39690 Striga asiatica
SMO244G0085 Selaginella moellendorffii
Solyc04g049660.3 Solanum lycopersicum
Sopen04g019850 Solanum pennellii
Sp5g26590 Schrenkiella parvula
TAR625G0649 Trochodendron aralioides
TAR628G1069 Trochodendron aralioides
THA.LOC104816989 Tarenaya hassleriana
Thecc.02G032500 Theobroma cacao
Thhalv10019781m.g Eutrema salsugineum
TPR.G12006 Trifolium pratense
TPR.G31901 Trifolium pratense
TWI14G0977 Tripterygium wilfordii
TWI23G0030 Tripterygium wilfordii
unitig_899.g15063 Utricularia gibba
vmacro00584 Vaccinium macrocarpon
vmacro05477 Vaccinium macrocarpon
VMungo0720G1115 Vigna mungo
Zm00001eb002910 Zea mays
Zm00001eb003040 Zea mays
Zm00001eb159770 Zea mays

User provided reference genes

Program Settings